Positive Strand RNA Viruses: Picornaviruses Overview
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Questions and Answers

What is the structure of picornaviruses?

  • Enveloped helical capsid with a diameter of ~50 nm
  • Complex cylindrical structure with a diameter of ~100 nm
  • Naked icosahedral capsid with a diameter of ~30 nm (correct)
  • Naked filamentous capsid with a diameter of ~20 nm
  • What is the primary mode of transmission for viruses in the Flavivirus genus?

  • Via contaminated water supplies
  • Transmitted by arthropods (correct)
  • Through foodborne routes
  • Direct contact with infected individuals
  • Which protein remains buried within the capsid of picornaviruses?

  • VP1
  • VP4 (correct)
  • VP3
  • VP2
  • What type of genetic material do picornaviruses have?

    <p>Single-stranded RNA with positive sense</p> Signup and view all the answers

    Which of the following statements about the Pestivirus genus is accurate?

    <p>It causes economically important diseases in livestock.</p> Signup and view all the answers

    Which virus is contained within the Hepacivirus genus?

    <p>Hepatitis C virus</p> Signup and view all the answers

    Which of the following diseases is NOT caused by picornaviruses?

    <p>Influenza</p> Signup and view all the answers

    How many copies of M and E proteins are found in a flavivirus virion?

    <p>180 copies each</p> Signup and view all the answers

    What is unique about the 5’ and 3’ ends of the picornavirus RNA genome?

    <p>The 5’ end has a viral protein VPg instead of a 5’ cap</p> Signup and view all the answers

    What structural feature do mature flavivirus particles possess?

    <p>They have a golf ball-like appearance.</p> Signup and view all the answers

    What is the primary role of eIF-4F complex in the translation process of cellular RNAs?

    <p>It binds to the 5’ end of RNA and recruits ribosomal subunits.</p> Signup and view all the answers

    What impact does proteolytic cleavage of eIF-4G have on the host cell during picornavirus infection?

    <p>It abolishes cap-dependent translation.</p> Signup and view all the answers

    How does the 40S ribosomal subunit initiate translation after scanning the mRNA?

    <p>By finding the initiator codon (AUG) and assembling the 80S ribosome.</p> Signup and view all the answers

    What is a consequence of failing to properly recruit eIF-4E during picornavirus infection?

    <p>Failure to initiate translation of cellular mRNA.</p> Signup and view all the answers

    Which of the following best describes how picornavirus proteins are produced?

    <p>As a single precursor polyprotein that is cleaved by viral proteinases.</p> Signup and view all the answers

    What characterizes the genome of flaviviruses?

    <p>It is a linear single-stranded RNA capped at the 5' end.</p> Signup and view all the answers

    How are the proteins of flaviviruses generated from their genome?

    <p>As a long polyprotein followed by proteolytic cleavage.</p> Signup and view all the answers

    Which of the following structural proteins is found in the mature virion of flaviviruses?

    <p>Three structural proteins.</p> Signup and view all the answers

    What is unique about the E protein in flaviviruses?

    <p>It creates a hydrophobic fusion peptide protected by neighboring E proteins.</p> Signup and view all the answers

    What role do viral and cellular proteases play in flavivirus replication?

    <p>They act to cleave the polyprotein into mature proteins.</p> Signup and view all the answers

    What mechanism assists in the entry of flaviviruses into host cells?

    <p>Endocytosis within clathrin-coated vesicles.</p> Signup and view all the answers

    What is the consequence of antibody-dependent enhancement (ADE) in flavivirus infections?

    <p>It can lead to more severe disease manifestations.</p> Signup and view all the answers

    Which characteristic distinguishes flaviviruses from togaviruses?

    <p>Differences in genome structure and organization.</p> Signup and view all the answers

    What is the primary role of proteinases in the Picornavirus life cycle?

    <p>To cleave the polyprotein into functional proteins</p> Signup and view all the answers

    What is the function of the internal ribosome entry site (IRES) in Picornaviruses?

    <p>To allow translation initiation without a 5’ cap</p> Signup and view all the answers

    Which proteins are primarily encoded by the P1 region of the Picornavirus genome?

    <p>Structural proteins</p> Signup and view all the answers

    What characterizes the structure of the IRES elements in Picornaviruses?

    <p>They contain pyrimidine rich tracts</p> Signup and view all the answers

    How do virions of Picornaviruses typically enter host cells?

    <p>Through receptor-mediated endocytosis</p> Signup and view all the answers

    What structural feature allows Picornavirus virions to bind to cellular receptors?

    <p>Loop regions or ‘canyons’ on their surface</p> Signup and view all the answers

    What is the composition of the VP1-4 proteins in Picornaviruses?

    <p>A jelly roll structure composed of β-barrels</p> Signup and view all the answers

    What is the likely function of the pyrimidine-rich tract found in IRES elements?

    <p>To initiate translation at the correct position</p> Signup and view all the answers

    What mechanism facilitates the entry of Flaviviruses into host cells?

    <p>Endocytosis</p> Signup and view all the answers

    Which protein is cleaved to release the mature C protein after its synthesis?

    <p>NS2B/NS3A</p> Signup and view all the answers

    What role does the prM protein play in the Flavivirus lifecycle?

    <p>Protects E protein from premature changes</p> Signup and view all the answers

    During Flavivirus replication, what is produced in significantly larger amounts?

    <p>Plus-strand RNA</p> Signup and view all the answers

    What is the function of the furin protease in the Togavirus lifecycle?

    <p>Cleaves prM before virion release</p> Signup and view all the answers

    What type of RNA genome do Togaviruses possess?

    <p>Linear single-stranded positive-sense RNA</p> Signup and view all the answers

    How many structural proteins are translated from Togavirus subgenomic mRNA?

    <p>Five</p> Signup and view all the answers

    What component is crucial for the assembly of the Flavivirus at intracellular membranes?

    <p>Endoplasmic reticulum</p> Signup and view all the answers

    What initiates the translation of the Flavivirus genome in the host cell?

    <p>Ribosomes binding to a poly(A) tail</p> Signup and view all the answers

    What term describes the viral RNA replication process that results in new plus-strand RNA for various purposes?

    <p>Asymmetrical replication</p> Signup and view all the answers

    What is the primary consequence of receptor-mediated endocytosis for Togaviruses?

    <p>Release of viral RNA into the cytosol</p> Signup and view all the answers

    What characteristic feature do Togavirus particles exhibit?

    <p>Icosahedral symmetry with spikes</p> Signup and view all the answers

    What type of signal sequence is involved in the synthesis of the capsid protein precursor in Flaviviruses?

    <p>20 AA signal sequence</p> Signup and view all the answers

    What is a major public health concern related to Togaviruses?

    <p>Transmission via mosquitoes</p> Signup and view all the answers

    Study Notes

    Positive Strand RNA Viruses

    • Picornaviruses, Flaviviruses, Togaviruses are positive strand RNA viruses.

    Picornaviruses - Structure

    • Picornaviruses are small RNA genome viruses.
    • They have a naked icosahedral capsid (non-enveloped).
    • The diameter is approximately 30 nm.
    • Hundreds of viral species infect humans, mammals, birds, fish, and other organisms.
    • They cause diseases like hepatitis, myocarditis, the common cold, and polio.

    Picornaviruses - Genome and Proteins

    • Picornaviruses bind to cellular receptors.
    • Mature virions have 60 copies of each of the following three to four proteins: VP1, VP2, VP3, and VP4.
    • Viral protein VPg is covalently bound to the 5' end of the RNA, instead of a 5' cap.
    • P1 encodes structural proteins.
    • P2 and P3 encode non-structural proteins.
    • The 5' non-coding region contains an internal ribosome entry site (IRES) that allows translation initiation.
    • This IRES has extensive secondary and tertiary structures that interact with other cell proteins.
    • The polyprotein is processed into individual proteins by viral proteinases.

    Picornaviruses - Entry

    • Poliovirus RNA enters the cytoplasm after major rearrangement of VP4 and hydrophobic N-terminal VP1, creating a channel in the membrane.

    Flaviviruses - Structure

    • Flaviviruses are spherical, enveloped particles about 50nm in diameter.
    • They have a spherical nucleocapsid with icosahedral symmetry.
    • They lack projections, having a "golf ball" appearance.
    • Surface glycoproteins are arranged with icosahedral symmetry.

    Flaviviruses - Genome and Proteins

    • Flaviviruses have a linear, positive sense, single-stranded RNA genome (~10-11 kB).
    • It's capped at the 5' end and lacks a poly(A) tail at the 3' end.
    • All genes are translated as single polyproteins and cleaved into proteins, including one capsid protein (C), two envelope proteins (M and E), and seven non-structural proteins.

    Flaviviruses - Attachment and Entry

    • No specific cellular receptor has been identified.
    • Entry occurs by endocytosis within clathrin-coated vesicles.

    Togaviruses - Structure

    • Togaviruses are spherical, enveloped viruses about 70nm in diameter.
    • They have envelope projections (spikes) and icosahedral symmetry in both the nucleocapsid and in the envelope glycoproteins.

    Togaviruses - Genome and Proteins

    • Togaviruses are positive-sense, single-stranded RNA viruses (9.7-11.8 kb).
    • They possess a 5' methylated cap and a 3' poly(A) tail (~70 nucleotides).
    • They have four non-structural proteins involved in RNA synthesis.
    • They have five structural proteins translated from subgenomic mRNAs: one capsid protein, three envelope proteins, and a small hydrophobic protein.

    Togaviruses - Genome and Proteins

    • The translated genome initially creates a single polyprotein that's later cleaved by host and viral proteases.
    • The RNA is initially translated into P123, then further cleaved by proteases into non-structural proteins, then the RNA is further translated into structural proteins from a subgenomic mRNA.

    Togaviruses - Assembly and Exit

    • Togavirus capsid proteins interact with cytoplasmic tails of envelope proteins.
    • Togaviruses exit the cell by budding.

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    Description

    Explore the world of positive strand RNA viruses with a focus on Picornaviruses. Learn about their structure, genome, and how they interact with host cells. Understand the diseases they can cause and the significance of their proteins in viral life cycles.

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