Summary

This document contains two quizzes, quiz 1 and quiz 2, about cell engineering and topics related to cell biology, including gene expression systems in mammalian cells, tissue engineering and bioreactors. The quizzes include multiple choice questions covering topics relating to how to create functional tissues for therapy, such as the appropriate cell culture conditions. It's meant to be used for studying or educational purposes.

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Quiz 1: 1.​ Which tissue source provokes the most severe host immune rejection? A.​ Xenogeneic tissue B.​ Allogeneic tissue C.​ Autologous tissue D.​ Engineered tissue 2.​ What is the Goal of Tissue Engineering? A.​ Identifying basic genetic and molecular defects causing a disease, and develo...

Quiz 1: 1.​ Which tissue source provokes the most severe host immune rejection? A.​ Xenogeneic tissue B.​ Allogeneic tissue C.​ Autologous tissue D.​ Engineered tissue 2.​ What is the Goal of Tissue Engineering? A.​ Identifying basic genetic and molecular defects causing a disease, and developing molecular interventions to treat the same B.​ Cure or slow down a genetic disease by repairing the damaged gene responsible for the disease C.​ Restore structure and function of damaged tissues and organs D.​ Providing biological substitutes that restore, maintain, or improve tissue function 3.​ In tissue sample preparation for H&E staining, after treating tissue sample in formalin, the next step will be carried out as: A.​ Sectioning B.​ Paraffin infiltration C.​ Dehydration D.​ Rehydration 4.​ Which microscope is suitable for study of living, cultures cells: A.​ Phase-Contrast Microscopy B.​ Confocal Microscopy C.​ Scanning Electron Microscopes D.​ Bright-Field Microscopy 5.​ Which procedure can be applied to study on the accumulation of lipid droplets in the tissue? A.​ Treating with heat B.​ Paraffin embedding C.​ Frozen-sectioning D.​ Processing with organic solvents 6.​ For histological evaluation, the paraffin sections are generally cut at: A.​ 1-10 μm thickness B.​ less than 1 μm thickness C.​ 1-10 nm thickness D.​ 10-100 μm thickness 7.​ In the preparation of tissue for histology, Xylen can be used to: A.​ remove alcohol B.​ dehydrate the fixed tissue C.​ preserve tissue structure by cross-linking and denaturing proteins D.​ infiltrate and allow the tissue to harden for Trimming 8.​ According to the results of Hematoxyline and Eosin staining below, the cell-free ECM is determined via figure: A.​ C B.​ D C.​ A D.​ B 9.​ How many components in one slice of tissue can be detected using immunofluorescent staining? A.​ Zero B.​ None C.​ One D.​ More Than One 10.​The correct section with its corresponding histology image is as follow: A.​ 145-B, 241-C, 313-A B.​ 145-A, 241-C, 313-B C.​ 145-A, 241-B, 313-C D.​ 145-C, 214-A, 313-B 11.​ Which component can not be revealed by using Hematoxyline and Eosin staining? A.​ Collagen type I B.​ Glycoproteins C.​ Elastin D.​ Glycosaminoglycans 12.​The continuous 3D nanofibrous ECM microstructure is best revealed by using: A.​ Immunofluorescent staining and fluorescence microscopy B.​ Phase-Contrast Microscopy C.​ Transmission electron microscopy D.​ Scanning electron microscopy 13.​Which statement is correct about Hematoxylin? A.​ It produces a dark red or pink color B.​ It stains cytoplasmic components and collagen fibers C.​ It behaves like a basic dye D.​ It is used for staining DNA in the cell nucleus and other basic structures 14.​Which area is considered as IHC-positive staining? A.​ B B.​ A C.​ C D.​ D 15.​Lining lumen of blood vessels is made up of: A.​ Epithelial cells B.​ Glial cells C.​ Muscle cells D.​ Fibroblasts Quiz 2: TE2024 - CELL ENGINEERING 1. You are designing a gene therapy experiment to introduce a gene into mammalian cells. Which type of promoter should you choose for high gene expression in mammalian cells?​ A. T7 promoter​ B. SV40 promoter​ C. Gal1 promoter​ D. ColE1 Ori 2. A researcher needs to express a protein that undergoes complex post-translational modifications, such as glycosylation and phosphorylation, to study its function in a human cell context. Which expression system would be the most suitable?​ A. Bacterial expression plasmid​ B. Yeast expression plasmid​ C. Mammalian expression plasmid​ D. Plant cell expression plasmid 3. You want to perform stable gene expression in non-dividing cells for long-term studies. Which vector system is most suitable?​ A. Adenoviral vector​ B. Lentiviral vector​ C. Non-viral plasmid​ D. CRISPR-Cas9 without vector 4. A student needs to enhance the interaction between cells and the extracellular matrix (ECM) in a 3D culture. Which modification strategy would be most effective?​ A. Preconditioning cells​ B. Using electrostatic interactions on the cell surface​ C. Encapsulating cells in biomaterials​ D. Genetic modification of the ECM proteins 5. A researcher is deciding between viral and non-viral vectors for gene delivery into mammalian cells. Which factor is typically an advantage of non-viral vectors compared to viral vectors?​ A. Higher gene transfer efficiency​ B. Longer duration of gene expression​ C. Reduced immunogenicity and ease of production​ D. Ability to integrate into the host genome​ 6. A research team is developing a therapy using genetically modified cells that need to survive under harsh conditions, such as low oxygen levels. Which cell engineering approach would be most appropriate to increase cell survival?​ A. Preconditioning the cells​ B. Gene-editing with CRISPR​ C. Surface modification with hydrophobic molecules​ D. 3D cell assembly​ 7. Your lab is working with mesenchymal stem cells (MSCs) to promote bone regeneration. Which gene modification would best enhance MSC homing to injury sites?​ A. Overexpressing Sox11​ B. Inhibiting CXCR4​ C. Deleting the Runx2 gene​ D. Expressing the IL-10 gene​ 8. When designing a plasmid for mammalian cell gene expression, which feature ensures efficient initiation of translation in mammalian cells?​ A. Shine-Dalgarno sequence​ B. Kozak sequence​ C. T7 promoter​ D. Polyadenylation signal​ 9. You are designing an experiment using lipofection to deliver plasmid DNA into HEK293T cells. What is a likely outcome of using this method compared to viral vectors?​ A. Higher transfection efficiency​ B. Long-term gene expression​ C. Lower immunogenicity​ D. Higher risk of insertional mutagenesis​ 10. A researcher needs to create induced pluripotent stem cells (iPSCs) from adult fibroblasts. Which combination of factors is essential for reprogramming the fibroblasts into iPSCs?​ A. Oct4, Sox2, Klf4, c-Myc​ B. CRISPR, Oct4, Klf4, Sox11​ C. BMPs, Runx2, Sox2, CXCR4​ D. Sox2, RANK-Fc, IL-4, VEGF​ Quiz 3 -> Giống quiz 1 ??? Quiz 4 4. Neocart for cartilage engineering mimic one of characters of native tissue. What is the character? A.​ No hydrostatic pressure B.​ Low oxygen C.​ Constant hydrostatic pressure D.​ High oxygen 5. Physiological cell culture conditions: 1.Temperature: Usually maintained at 37°C formammalian cells. 2. pH: Maintained around 6.0-8.0 3. Oxygen Tension: Controlled levels of oxygen, often around 40% for normoxic conditions. 4. Nutrient Supply: Adequate supply of glucose, proteins in the culture medium. 5. Waste Removal: Efficient removal of metabolic by- products. How many is the RIGHT comments? A.​ 5 B.​ 3 C.​ 4 D.​ 2 6. A student is conducting cell culture in a bioreactor. Initially, she/he has 1 million cells (1 × 10^6 cells) in the culture medium. The cells have a doubling time of 24 hours (meaning the number of cells will double every 24 hours). If there is a 5% cell death rate after each 24-hour period, calculate the remaining cell count after 3 days.* A.​ more than 5 million cells B.​ more than 6 million cells C.​ more than 8 million cells D.​ more than 7 million cells 7. Why are scale-out strategies more relevant for tissue engineering applications rather than scale-up of a bioreactor? 1. Patient-Specific Requirements 2. Control of Microenvironment 3. Reduced Risk of Contamination 4. Flexibility in Production 5. Improved Efficiency How many the RIGHT answer? A.​ 5 B.​ 3 C.​ 2 D.​ 4 8. What are NOT the main differences between bioreactors for bioprocess engineering and tissue engineering? A.​ Bioprocess engineering focuses on cell production (e.g., for vaccines), while tissue engineering emphasizes creating functional tissue constructs. B.​ Bioprocessing only emphasizes on the cell while tissue engineering focuses on the the combination of cell and scaffold. C.​ Tissue engineering often requires more complexconnditions (e.g., mechanical stimulation, specific growth factors) compared to standard bioprocessing. D.​ Tissue engineering might involve smaller, more specialized systems, while bioprocessing typically uses larger, more standardized setups. 9. Which of the following tissue regeneration is not related to COMPRESSION? A.​ Skin B.​ Bone C.​ Cardiac Tissue D.​ Cartilage 10. A student is conducting cell culture in a bioreactor. Initially, she/he has 1 million cells (1 x 10^6 cells) in the culture medium. The cells have a doubling time of 24 hours (meaning the number of cells will double every 24 hours). Calculate the number of cells after 3 days of culture (72 hours). A.​ 8 million cells B.​ 9 million cells C.​ 3 million cells D.​ 6 million cells 11. Which compounds are NOT compulsory to set up a bioreactor system? A.​ Media reservoir B.​ Chamber C.​ Waste Cointainer D.​ Pumping 12. Which is the most effective method to disinfection of chambers or mount? A.​ Sterilized with steam B.​ Gas sterilization C.​ UV exposure D.​ Gamma irradation 13. Which is NOT a suitable material for bioreactors? 1.​ Silicone 2.​ Copper 3.​ Polyethylene 4.​ Stainless steel Quiz 5 1.​ Which method would be suitable to decellularize porcine blood vessels? A.​ Agitation in 2 mg/mL collagenase and dispase B.​ Sonication with 1X Phosphate buffer saline C.​ Perfusion with 0.5% Triton X100 D.​ Three cycles of Freeze-thaw 2. Which protocol can be applied to decellularize dermis tissue (0.5 cm in thickness, surface area 1 x 1 cm2) ? A.​ Repeat 10 cycles of Freeze-thaw treatment Agitation in 1% Triton X100 --> Incubate in Salin buffer containing DNase for 2 hours --> Final wash in Saline buffer for 24 hour B.​ Perfusion tissue in 1% Triton X100 --> Incubate in Salin buffer containing DNase for 2 hours --> Final wash in Saline buffer for 24 hour --> Repeat 10 cycles of Freeze-thaw treatment C.​ Agitation in 1% Triton X100 --> Incubate in Salin buffer containing Collagenase for 2 hours --> Final wash in Saline buffer for 24 hour D.​ Perfusion tissue in 1% Triton X100 --> Incubate in Salin buffer containing DNase for 2 hours --> Final wash in Saline buffer for 24 hour 3. Why are decellularized organs or tissues used in tissue engineering? A.​ All are correct B.​ decellularized organs or tissues are used in in vitro expansion protocol C.​ decellularized organs or tissues act as scaffolds with ECM where cells can be seeded D.​ decellularized organs or tissues with well-preserved cellular components can help in the regeneration of tissue 4. Which solution causes cell breakage of swelling: A.​ 1% Sodium Chloride B.​ 9% Sodium Chloride C.​ 0.1% Sodium Chloride D.​ 0.9% Sodium Chloride 5. To confirm successful decellularization, DNA residue should be: A.​

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