Nucleic Acids Digestion and Separation Quiz
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Questions and Answers

What was the purpose of digesting the nucleic acids with RNAase A?

  • To separate DNA from RNA fragments
  • To remove RNA from the DNA preparation (correct)
  • To ensure the DNA was in a supercoiled form
  • To degrade any remaining RNA in the sample

What was the purpose of passing the digested nucleic acids through the Bio-Gel A50m column?

  • To further purify the DNA from the RNA fragments (correct)
  • To concentrate the DNA for downstream applications
  • To remove any residual RNAase A from the sample
  • To separate the plasmids based on their size

What was the composition of the DNA preparation used in these experiments?

  • Mostly supercoiled plasmids with a small amount of nicked circles and linear fragments
  • 1/3 supercoiled plasmids, 1/3 nicked circles, and 1/3 larger oligomers of the plasmid (correct)
  • 1/2 supercoiled plasmids and 1/2 nicked circles
  • 1/3 supercoiled plasmids, 1/3 nicked circles, and 1/3 linear DNA fragments

What was the purpose of using cytochalasin B during the injection of the DNA into the pronucleus?

<p>To increase the viscosity of the medium to stabilize the egg during injection (B)</p> Signup and view all the answers

What was the volume of DNA solution injected into the male pronucleus?

<p>Approximately 2 pl (A)</p> Signup and view all the answers

What was the purpose of washing the ova free of cytochalasin B after the injection?

<p>To allow the ova to resume normal development (C)</p> Signup and view all the answers

What was the purpose of the thymidine kinase assay described in the text?

<p>To measure the activity of thymidine kinase in mouse tissues (D)</p> Signup and view all the answers

What was the main purpose of the nucleic acid isolation procedure described in the text?

<p>To extract and purify DNA and RNA from mouse tissues (D)</p> Signup and view all the answers

What was the purpose of the $eta$-mercaptoethanol included in the thymidine kinase assay reaction mixture?

<p>To act as a reducing agent and maintain the activity of thymidine kinase (D)</p> Signup and view all the answers

What was the purpose of the proteinase K used during the nucleic acid isolation procedure?

<p>To degrade proteins and facilitate the extraction of nucleic acids (B)</p> Signup and view all the answers

What was the purpose of the DE-81 paper used in the thymidine kinase assay?

<p>To adsorb the $^3$H-TMP produced during the enzyme assay (C)</p> Signup and view all the answers

What was the purpose of the NaF included in the thymidine kinase assay reaction mixture?

<p>To inhibit the activity of phosphatases and prevent the dephosphorylation of $^3$H-TMP (A)</p> Signup and view all the answers

What was used to label DNA probes in the described experiment?

<p>32P-dNTPs (B)</p> Signup and view all the answers

Which enzyme was NOT mentioned in the text for restriction digestion?

<p>Sal I (B)</p> Signup and view all the answers

What was the purpose of using RNAase A in the restriction digests?

<p>To degrade RNA contaminants (A)</p> Signup and view all the answers

What specific conditions were used for the hybridizations in the described experiment?

<p>50% formamide, 3.2 × SSC, 10% dextran sulfate (B)</p> Signup and view all the answers

Which fragment was used to prepare the 32P-cDNA?

<p>460 bp fragment from Bgl II site to Sst I site (B)</p> Signup and view all the answers

What method was used to transfer DNA onto nitrocellulose in the experiment?

<p>Southern blot hybridization (D)</p> Signup and view all the answers

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