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Which of the following is an example of normal flora that can be found in the human body?
Which of the following is an example of normal flora that can be found in the human body?
Normal flora can become pathogenic if conditions in the body change.
Normal flora can become pathogenic if conditions in the body change.
True
What role does microbiology play in public health?
What role does microbiology play in public health?
Microbiology is important for identifying diseases, tracking disease outbreaks, and controlling antimicrobial resistance.
The organisms that live in benign symbiosis with the host are referred to as __________.
The organisms that live in benign symbiosis with the host are referred to as __________.
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Match the following roles of microbiology with their descriptions:
Match the following roles of microbiology with their descriptions:
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What is one function of Type IV pili in bacteria?
What is one function of Type IV pili in bacteria?
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Peritrichous flagella can be found in E. coli.
Peritrichous flagella can be found in E. coli.
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What type of pili allows for the transfer of DNA between two bacteria?
What type of pili allows for the transfer of DNA between two bacteria?
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Flagella in V. cholerae are crucial for its ______.
Flagella in V. cholerae are crucial for its ______.
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Match the following types of flagella with their description:
Match the following types of flagella with their description:
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Which of the following pathogens is categorized as a high-risk organism with severe human disease potential?
Which of the following pathogens is categorized as a high-risk organism with severe human disease potential?
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BSL-4 facilities require personnel to wear pressurized suits with separate air supply.
BSL-4 facilities require personnel to wear pressurized suits with separate air supply.
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What is the main characteristic of ACDP Category 4 organisms?
What is the main characteristic of ACDP Category 4 organisms?
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At BSL-2 facilities, work can be performed in __________ cabinets.
At BSL-2 facilities, work can be performed in __________ cabinets.
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Match the Biosafety Levels with their characteristics:
Match the Biosafety Levels with their characteristics:
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Which of the following is NOT a characteristic of BSL-3 facilities?
Which of the following is NOT a characteristic of BSL-3 facilities?
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Name one example of a pathogen categorized under ACDP Category 4.
Name one example of a pathogen categorized under ACDP Category 4.
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BSL-1 laboratories can handle Category 4 organisms without any special precautions.
BSL-1 laboratories can handle Category 4 organisms without any special precautions.
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Which type of mutation is represented by a substitution of a single nucleotide?
Which type of mutation is represented by a substitution of a single nucleotide?
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Higher similarity in genetic sequences indicates that the organisms are more distantly related.
Higher similarity in genetic sequences indicates that the organisms are more distantly related.
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What is the primary purpose of phylogenetic trees?
What is the primary purpose of phylogenetic trees?
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Gene mutations such as point mutations and ________ can change protein encoding.
Gene mutations such as point mutations and ________ can change protein encoding.
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Match the type of genetic change with its description:
Match the type of genetic change with its description:
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What method can produce a multiple sequence alignment (MSA)?
What method can produce a multiple sequence alignment (MSA)?
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The mecA gene is specifically associated with Staphylococcus aureus.
The mecA gene is specifically associated with Staphylococcus aureus.
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What does a higher percentage similarity in genetic distance indicate?
What does a higher percentage similarity in genetic distance indicate?
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What effect does a beneficial mutation have on an organism?
What effect does a beneficial mutation have on an organism?
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A neutral mutation negatively impacts the fitness of an organism.
A neutral mutation negatively impacts the fitness of an organism.
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Name a method of bacterial evolution that leads to antibiotic resistance.
Name a method of bacterial evolution that leads to antibiotic resistance.
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A deleterious mutation __________ organism fitness.
A deleterious mutation __________ organism fitness.
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Match the following terms with their definitions:
Match the following terms with their definitions:
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What can antibiotic usage create in bacterial populations?
What can antibiotic usage create in bacterial populations?
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Selective pressure from antibiotics can lead to the evolution of drug-resistant bacteria.
Selective pressure from antibiotics can lead to the evolution of drug-resistant bacteria.
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What is a common outcome of spontaneous mutations in bacteria?
What is a common outcome of spontaneous mutations in bacteria?
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The transfer of genetic material between bacteria is known as __________.
The transfer of genetic material between bacteria is known as __________.
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Which type of mutation occurs at a steady rate and has no net effect?
Which type of mutation occurs at a steady rate and has no net effect?
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What type of organism is Campylobacter jejuni?
What type of organism is Campylobacter jejuni?
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Streptococcus mutans cannot tolerate oxygen in the air.
Streptococcus mutans cannot tolerate oxygen in the air.
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What is the process by which most bacteria reproduce?
What is the process by which most bacteria reproduce?
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The time taken for a bacterial cell to reproduce is called the __________ time.
The time taken for a bacterial cell to reproduce is called the __________ time.
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Match the bacterial growth phases with their descriptions:
Match the bacterial growth phases with their descriptions:
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Which of the following bacteria has a generation time of approximately 30 minutes?
Which of the following bacteria has a generation time of approximately 30 minutes?
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The GasPak and Candle methods ensure a true anaerobic environment.
The GasPak and Candle methods ensure a true anaerobic environment.
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What is a characteristic feature of the lag phase in bacterial growth?
What is a characteristic feature of the lag phase in bacterial growth?
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During the __________ phase, bacterial growth ceases due to depleted nutrients.
During the __________ phase, bacterial growth ceases due to depleted nutrients.
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Which organism is known for having a very long generation time of approximately 14 days?
Which organism is known for having a very long generation time of approximately 14 days?
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Study Notes
Microbiology Textbooks
- Prescott's Microbiology (8th ed.) by Willey et al., published by McGraw-Hill Higher Education.
- Brock Biology of Microorganisms (14th ed.) by Madigan et al., published by Pearson.
- Hugo & Russell's Pharmaceutical Microbiology (8th ed.) by Denyer et al., published by Blackwell Publishing.
- Principles and Practice of Disinfection, Preservation, and Sterilization (5th ed.) by Russell, Hugo & Ayliffe, published by Wiley-Blackwell.
Learning Objectives
- Gain awareness of basic microbiology principles
- What is microbiology?
- What are microorganisms?
- How do we study microbes?
- Describe and provide examples of relevant areas in which microbiology plays an important role.
- Human health and wellbeing.
- Pharmaceuticals and biotechnology.
What is Microbiology?
- The study of microorganisms (microbes).
- Includes bacteria, viruses, fungi, archaea, parasites, and protozoa.
What are Microbes?
- Microscopic (<1mm), often unicellular organisms.
- Viruses are acellular.
- Some fungi form multicellular structures.
- Among the first organisms to evolve on Earth.
- Exhibit the greatest genetic diversity of all living organisms.
- Present in nearly every environment.
- Not all microbes are "friendly" (some pathogenic).
- 1012 human cells compared to 1014 microbes (in the human gut.)
Top Causes of Death in the UK (1915-2015)
- Infections, cancers, heart conditions were the major causes in different age groups.
Microbes and Health
- Not all microbes are harmless (some pathogenic).
- Microbes can directly affect human health (both infectious and non-infectious diseases).
- Introduction of penicillin (1940s) revolutionized modern medicine.
Normal (Commensal) Flora
- Organisms living in benign symbiosis with the human host.
- Example: Non-toxigenic E. coli, lactic acid bacteria, Staphylococcus aureus, Candida yeast.
Medical Microbiology, Public Health, and Epidemiology
- Plays a crucial role in public health.
- Identifies diseases, tracks outbreaks, identifies treatments, and supports vaccination programs.
- Mathematical modelling for disease progression and spread.
Challenges in Medical Microbiology: Antibiotic Resistance
- Misuse of antibiotics has accelerated the development of resistance.
- Projected 10 million deaths annually by 2050 due to antibiotic resistance (AMR).
- Causes significant economic loss.
Microbiology in Biotechnology and Industry
- Utilizes living systems/organisms to produce various products.
- Molecular biology developments increase biotechnology scope.
Biotechnology: Industrial Chemicals
- Aspergillus niger (fungus) uses industrial byproducts to produce citric acid.
- Bacillus licheniformis (bacterium) used to produce alkaline protease for use in laundry detergents.
Biotechnology: Natural Medicinal Products
- Several microbial products are natural medicinal products.
- Example antimicrobials (penicillin, streptomycin), cholesterol-lowering agents (lovastatin), and neurotoxins (botulinum toxin).
Biotechnology: Recombinant Medicinal Products
- Genetically modified bacteria produce therapeutic proteins.
- Examples: Insulin (Humulin), vaccines (Gardasil).
Microbial Spoilage
- Microbial spoilage is the deterioration of a product due to microbes.
- Affects raw materials and finished products.
- Costs the pharmaceutical industry significantly (safety and quality concern).
Practical Microbiology: Growing Microbes
- Microbes can be grown in labs using solid or liquid media.
Practical Microbiology: Looking at Microbes
- Viruses, bacteria, and red blood cells have varying microscopic sizes.
Practical Microbiology: Molecular Microbiology
- Extracts genetic components (DNA, RNA, genes).
- Extracts cell components (proteins).
- Immunological, structural, and sequencing studies
Microbial Classification
- Explains how microbes are grouped based on shared properties, characteristics, etc.
Learning Outcomes
- Describe differences between cellular and acellular microorganisms.
- Describe main taxonomic groups of microorganisms and their features.
- Describe how microbes can be classified; provide examples.
Taxonomic Ranks: Species
- A group of living organisms capable of interbreeding, even geographically isolated.
- Assign genus, species names.
Taxonomic Ranks: Species/Strains in Microbiology
- Microbes are assigned based on phenotype, serotype, or genotype.
Phenotype Classification in Microbiology
- Observable characteristics (e.g., morphology, metabolic properties).
Serotype Classification in Microbiology
- Distinct variations in cell surface antigens.
Genotype Classification in Microbiology
- Genetic makeup of a cell, determines one of its characteristics (phenotype).
- Using methods such as PCR/DNA sequencing.
Phylogenetic Classification
- The study of evolutionary relationships among various biological entities.
Whole Genome Sequencing
- Determines the complete DNA sequence of an organism.
- Useful analysis methods, such as looking at mutations, gene presence/absence.
Visualizing Genotypes: Phylogenetics
- Evolutionary relationships among microbial entities are visualized by comparing genetic sequences.
Classification of Biological Entities
- Categorizes and explains microorganisms based on their properties, features, etc.
ACDP Categories of Organisms
- Categorises microorganisms based on the degree of hazard they potentially pose for humans and the environment.
Biosafety
- How to work safely with potentially harmful microbes in a controlled laboratory environment.
- Risk levels and controlled procedures are critical.
Microbial Growth and Evolution
- Microbial growth stages.
- Bacterial evolution (mutation and acquisition of DNA).
- Importance of microbial evolution.
Microbial Growth: Culturing
- Methods for culturing microbes (in-vitro, batch, etc.).
- Atmospheric requirements for microbial growth.
- How microbes are cultured.
- Steps in microbial growth (lag, exponential, stationary, death).
Microbial Metabolism
- Primary and secondary metabolic pathways.
- Importance of these pathways within a cellular system.
Viral Replication
- Viral replication cycle stages (subversion of host machinery).
- Overview of viral life cycle (lysis vs. integration).
Types of Microbial Infection
- Viral, bacterial, or fungal infections affect people in various ways.
- These microbes/infections can cause illness or other side effects.
Microbial Toxins
- Exotoxins (secreted by bacteria) and endotoxins (part of a bacterial cell wall) can promote infection by damaging tissue.
- Exotoxin examples: superantigens, membrane-disrupting toxins, protein-modifying toxins.
- Endotoxin (LPS) can cause fever and shock in large quantities.
Non-Bacterial Diseases: Mycoses
- Diseases caused by fungi.
Non-Bacterial Diseases: Viral
- Diseases caused by viruses.
Microbial Sampling
- Methods to collect, isolate, and quantify microbes (e.g., filtration, direct inoculation, liquid sampling).
Microbial Identification
- Techniques (e.g., culture-based methods like colony morphology, microscopic examination) to identify microbes.
- Molecular methods (e.g., PCR, ELISA, WGS, MALDI-TOF) for more precise identification.
Sources of Contamination and Sampling
- Origins and sources of contamination are critical to reduce risks.
- Methods, controls (e.g., clean rooms, aseptic techniques, hand hygiene) and standards to reduce contamination are discussed.
Sterilization and Purification
- Methods for sterilisation and purification of pharmaceuticals.
Strain Improvement
- Techniques to improve yield and efficiency of medicinal product production (e.g. mutagenesis, heterologous gene expression) and implications/effects to processes.
Biochemical Profiling
- How to accurately identify bacteria.
Sterility Testing
- Methods to assess the sterility of products.
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Description
Test your knowledge on the role of microbiology in public health, the characteristics of normal flora, and different biosafety levels. This quiz includes matching questions and definitions related to microbiological concepts and organisms. Challenge yourself to understand how microbiology impacts disease and health safety.