Podcast
Questions and Answers
Which approach to disease treatment is characterized by a limited number of individuals and high resource demand?
Which approach to disease treatment is characterized by a limited number of individuals and high resource demand?
Which statement accurately describes the role of a drug molecule?
Which statement accurately describes the role of a drug molecule?
What was the significance of penicillin in the treatment of diseases?
What was the significance of penicillin in the treatment of diseases?
Which of the following best describes the administration of lorazepam in treatment?
Which of the following best describes the administration of lorazepam in treatment?
Signup and view all the answers
Which statement is true regarding the impact of therapeutic drugs compared to other public health measures?
Which statement is true regarding the impact of therapeutic drugs compared to other public health measures?
Signup and view all the answers
What specific biological response is facilitated by a drug molecule's binding to receptors?
What specific biological response is facilitated by a drug molecule's binding to receptors?
Signup and view all the answers
What dose of morphine is commonly used to treat myocardial infarction?
What dose of morphine is commonly used to treat myocardial infarction?
Signup and view all the answers
In which countries is the medical approach to treatment typically utilized?
In which countries is the medical approach to treatment typically utilized?
Signup and view all the answers
When numbering the carbon chain for nomenclature, what is the primary objective to achieve the correct IUPAC name?
When numbering the carbon chain for nomenclature, what is the primary objective to achieve the correct IUPAC name?
Signup and view all the answers
Which of the following statements correctly describes how to treat multiple substituents when determining their positions in nomenclature?
Which of the following statements correctly describes how to treat multiple substituents when determining their positions in nomenclature?
Signup and view all the answers
What should be done if two different sets of carbon numbers from chain numbering are equal?
What should be done if two different sets of carbon numbers from chain numbering are equal?
Signup and view all the answers
To derive the correct IUPAC name for a compound, which groups are identified only as prefixes?
To derive the correct IUPAC name for a compound, which groups are identified only as prefixes?
Signup and view all the answers
What is generally assumed about the position of functional groups in carbon chain nomenclature?
What is generally assumed about the position of functional groups in carbon chain nomenclature?
Signup and view all the answers
What is the correct name for a carbon chain containing six carbon atoms?
What is the correct name for a carbon chain containing six carbon atoms?
Signup and view all the answers
Which abbreviation is appropriate for a terminal carbon chain of two carbon atoms?
Which abbreviation is appropriate for a terminal carbon chain of two carbon atoms?
Signup and view all the answers
Which of the following represents the structure of secondary butanol?
Which of the following represents the structure of secondary butanol?
Signup and view all the answers
What prefix is used for rings of carbon atoms?
What prefix is used for rings of carbon atoms?
Signup and view all the answers
Which term correctly describes a terminal carbon chain with eight carbon atoms?
Which term correctly describes a terminal carbon chain with eight carbon atoms?
Signup and view all the answers
What is the correct structure representation of isobutanol?
What is the correct structure representation of isobutanol?
Signup and view all the answers
Which type of carbon atom chain is indicated by 't-'?
Which type of carbon atom chain is indicated by 't-'?
Signup and view all the answers
What is the relation expressed as 'n- (normal)' in carbon nomenclature?
What is the relation expressed as 'n- (normal)' in carbon nomenclature?
Signup and view all the answers
Which of the following represents a propyl chain?
Which of the following represents a propyl chain?
Signup and view all the answers
Which of these erroneously uses an abbreviation for a terminal carbon chain?
Which of these erroneously uses an abbreviation for a terminal carbon chain?
Signup and view all the answers
What characteristic of rigid frameworks in compounds is highlighted?
What characteristic of rigid frameworks in compounds is highlighted?
Signup and view all the answers
Which of the following elements is NOT primarily focused on in organic chemistry?
Which of the following elements is NOT primarily focused on in organic chemistry?
Signup and view all the answers
What is indicated by the formula C128H221N3O54?
What is indicated by the formula C128H221N3O54?
Signup and view all the answers
Which type of isomerism is characterized by compounds having the same molecular formula but different structural configurations?
Which type of isomerism is characterized by compounds having the same molecular formula but different structural configurations?
Signup and view all the answers
In the context of hydrocarbons, what distinguishes branched chains from linear chains?
In the context of hydrocarbons, what distinguishes branched chains from linear chains?
Signup and view all the answers
What part of a molecule is defined as having the potential to participate in chemical reactions?
What part of a molecule is defined as having the potential to participate in chemical reactions?
Signup and view all the answers
What characteristic of palytoxin contributes to its potency in toxicology?
What characteristic of palytoxin contributes to its potency in toxicology?
Signup and view all the answers
Which statement about structural isomers is correct?
Which statement about structural isomers is correct?
Signup and view all the answers
In organic chemistry, which elements are involved in forming halides?
In organic chemistry, which elements are involved in forming halides?
Signup and view all the answers
What distinguishes functional groups from other molecular components?
What distinguishes functional groups from other molecular components?
Signup and view all the answers
Which functional group does not contain a carbonyl group?
Which functional group does not contain a carbonyl group?
Signup and view all the answers
What suffix is used for alkynes in systematic nomenclature?
What suffix is used for alkynes in systematic nomenclature?
Signup and view all the answers
In naming branched compounds, which of the following is NOT a correct approach?
In naming branched compounds, which of the following is NOT a correct approach?
Signup and view all the answers
Which of the following functional groups contains a halide group?
Which of the following functional groups contains a halide group?
Signup and view all the answers
What determines the suffix used in systematic nomenclature?
What determines the suffix used in systematic nomenclature?
Signup and view all the answers
Which of the following functional groups contains an amino group?
Which of the following functional groups contains an amino group?
Signup and view all the answers
What is the correct prefix for a three-carbon alkane?
What is the correct prefix for a three-carbon alkane?
Signup and view all the answers
Which functional group is characterized by a carboxyl group?
Which functional group is characterized by a carboxyl group?
Signup and view all the answers
Which of the following structures is NOT a cyclic compound?
Which of the following structures is NOT a cyclic compound?
Signup and view all the answers
What is the characteristic functional group of an ester?
What is the characteristic functional group of an ester?
Signup and view all the answers
Study Notes
Introduction to Pharmaceutical Chemistry
- This course, PF1009, is taught by Dr. Tim O'Sullivan
- Contact information: [email protected], Office 2.05 Cavanagh Building
- Lectures held Wednesdays 3-4 pm in LG52
Course Topics
- Nomenclature
- Carbonyls
- Carboxylic Acids
- Esters
- Acid Chlorides / Anhydrides
- Amides
- Aromatics
- Alkanes
- Alkenes
- Alkynes
- Alkyl Halides
- Alcohols
- Epoxides
- Amines
Required Texts
- Organic Chemistry - J. McMurry
- Beginning Organic Chemistry : Workbook 2 – G.L. Patrick
- (An Introduction to Medicinal Chemistry – G.L. Patrick )
- Partial notes available on Canvas
The Importance of Therapeutic Drugs
- Primarily used in medical treatments
- Provide an alternative to surgical interventions
- Have a far greater reach than surgical treatments
- Developed and developing countries can benefit from drug treatments
- They are second only to public health measures in their impact
- Examples of drug impact:
- Penicillin treating bacterial meningitis
- Salbutamol sulfate relieving asthma attacks
- Lorazepam stopping seizures (status epilepticus)
- Morphine treating myocardial infarctions
Drug Molecules
- Contain one or more functional groups
- Are arranged in a defined 3D space on a structural framework
- Bind specifically to a receptor
- Promote a beneficial biological response
- Prevent binding to untargeted receptors to minimize toxicity
- Have a rigid framework that reduces flexibility and prevents secondary binding
- Can withstand the journey from point of administration to interaction with the receptor
Organic Chemistry
- The study of the structures, synthesis, and reactions of carbon-containing compounds
- Often referred to as "The chemistry of life"
- Focus on the elements: C, H, N, O, P, S, X (Halides)
- Palytoxin is an example of a complex organic compound
- It is the deadliest, naturally occurring compound.
- Only takes 10.5 μg to kill a 70 Kg person
Molecular, Structural, and Empirical Formulae
- These are all representations of chemical compounds
- Molecular Formula: Shows the total number of atoms of each element in a molecule
- Example: C6H14O2
- Structural Formula : Shows the arrangement of atoms in a molecule
- Example: Ethane is H3C-CH3
- Empirical Formula: Shows the simplest whole-number ratio of atoms of each element in a compound.
- Example: C3H7O
- Isomers are compounds that have the same molecular formula but different structural formulas.
Understanding Organic Structures
- Isomers are compounds with the same molecular formula but different structural formulas.
- Ethanol and dimethyl ether are both C2H6O
- Ethanol has a hydroxyl group (-OH) attached to the carbon chain, while dimethyl ether has an oxygen atom attached to two methyl groups (CH3).
- Other types of isomers:
- Regioisomers – have different functional groups on the same carbon chain
- Stereoisomers – have the same functional groups but different spatial arrangements.
Hydrocarbon Framework
- Alkanes: Contain only single bonds between carbon atoms (C-C)
- Example: Methane (CH4)
- Alkenes: Contain at least one double bond between carbon atoms (C=C)
- Example: Ethene (C2H4)
- Alkynes: Contain at least one triple bond between carbon atoms (C≡C)
- Example: Ethyne (C2H2)
- Branched chains: Have carbon atoms with more than two bonds, creating a branched structure
- Example: Isobutane (C4H10)
- Rings: Carbon atoms form closed rings
- Example: Cyclohexane (C6H12)
- Combinations of the above: Often occur in organic molecules
Functional Groups
- Part of a molecule with the potential to take part in a chemical reaction or interaction.
- Leucine is an example of an amino acid with multiple functional groups: NH2, OH, COOH
Representing 3D Information
- Wedge lines: Indicate bonds coming out of the plane of paper.
- Dashed lines: Indicate bonds going behind the plane of paper.
Names of Carbon Chains
- Number of Carbon Atoms| Chain Name | Formula | Abbreviation | Alkane Name
- 1 | Methyl | -CH3 | Me | Methane
- 2 | Ethyl | -CH2CH3 | Et | Ethane
- 3 | Propyl | -CH2CH2CH3 | Pr | Propane
- 4 | Butyl | -(CH2)3CH3 | Bu | Butane
- 5 | Pentyl | -(CH2)4CH3 | - | Pentane
- 6 | Hexyl | -(CH2)5CH3 | - | Hexane
- 7 | Heptyl | -(CH2)6CH3 | - | Heptane
- 8 | Octyl | -(CH2)7CH3 | - | Octane
- 9 | Nonyl | -(CH2)8CH3 | - | Nonane
- 10 | Decyl | -(CH2)9CH3 | -| Decane
Usage of Abbreviations
- Can only be used for terminal chains of atoms
- Example: n-BuOH (normal butanol) is correct, while BuOH is incorrect.
Branched Chains
- n- (normal) | Straight chain
- Example: n-Butanol
- iso- or i- (isomer): A branched chain with a specific arrangement
- Example: i-Butanol
- sec- (secondary): A branched chain with a specific arrangement
- Example: sec-Butanol
- tert- or t- (tertiary): A branched chain with a specific arrangement.
- Example: t-Butanol
Carbon Rings
- Cyclic structures of carbon atoms
- Prefix "cyclo" is used to indicate a ring
- Commonly have non-planar structures, such as chair or boat conformations
- Examples:
- Cyclopropane
- Cyclobutane
- Cyclopentane
- Cyclohexane
Common Functional Groups
-
Alkanes: Contain no functional groups
- Suffix: -ane
-
Alkenes: Contain a carbon-carbon double bond (C=C)
- Suffix: -ene
-
Alkynes: Contain a carbon-carbon triple bond (C≡C)
- Suffix: -yne
-
Alcohols: Contain a hydroxyl (OH) group
- Suffix: -ol
-
Ethers: Contain an alkoxy (OR) group
- Named by the alkyl groups attached to the oxygen, ending with "ether."
-
Amines: Contain an amino (NH2) group
- Suffix: -amine or amino-
Common Functional Groups II
-
Alkyl Halides: Contain a halogen (-F, -Cl, -Br, -I) group
- Prefix: Halo- or -halide
-
Aldehydes: Contain a carbonyl (C=O) group attached to an alkyl and a hydrogen atom.
- Suffix: -al
-
Ketones: Contain a carbonyl (C=O) group attached to two alkyl groups
- Suffix: -one
-
Carboxylic Acids: Contain a carboxyl (-CO2H) group
- Suffix: -oic acid
-
Esters: Contain a carboxyl group with an alkyl group attached to the oxygen
- Suffix: -ate
-
Nitriles (Cyanides): Contain a cyano (CN) group
- Prefix: cyano- or -nitrile.
Systematic Nomenclature I
- A series of rules set by IUPAC (International Union of Pure and Applied Chemistry) to name organic compounds
- The suffix corresponds to the functional group
- Example: -ane for alkanes, -ol for alcohols
- The prefix indicates the number of carbon atoms
- Example: meth- (1), eth- (2), prop- (3), but- (4), pent- (5)
Systematic Nomenclature II
- Branched compounds are named as alkyl derivatives of the longest straight chain in the molecule
- The length of the longest chain provides the parent name
- Numbering the chain starts from the end that produces the smaller numbers for the branches
- A hyphen separates numbers from names and prefixes
- Numbers are used to identify the position of substituents not on terminal carbons.
- Numbering should start at the end that gives the lowest set of numbers across all substituents, including functional groups.
- If two possible sets of numbers are equal, choose the numbering that gives the lowest number to the substituent that comes first alphabetically.
- Substituents are listed in alphabetical order
- Multiplying prefixes (di, tri, etc.) are ignored when alphabetizing.
Systematic Nomenclature III (Alkanes)
- Multiple substituents are indicated by di, tri, tetra, penta, etc.
- Numbering the chain starts at the end that gives the lowest set of numbers for all substituents
- If two sets of numbers are equal, choose the numbering that gives the lowest number to the substituent that comes first alphabetically
- Example:
- 2,2-dimethylbutane
- 2,4-dimethylpentane (not 3,4-dimethylpentane)
- 2,3-dimethylpentane (not 3,4-dimethylpentane)
- 3-ethyl-2-methylpentane (not 3-ethyl-4-methylpentane)
Systematic Nomenclature IV
- FGs present: Number the chain so that the FG gets the lowest number possible
- Characteristic groups are cited only as prefixes in substitutive nomenclature e.g. halogens.
- Terminal functional groups are assumed to be on carbon 1, e.g. aldehydes, carboxylic acids, etc.
Systematic Nomenclature MCQ I
-
Question 1: What is the IUPAC name for:
- Answer: 2,2-dimethylbutane
-
Question 2: The correct IUPAC name for the following compound is:
- Answer: 4,4-Dimethyl-1-pentene
Studying That Suits You
Use AI to generate personalized quizzes and flashcards to suit your learning preferences.
Related Documents
Description
This quiz covers essential topics from the Introduction to Pharmaceutical Chemistry course, focusing on nomenclature, various functional groups, and the importance of therapeutic drugs. Dive into key concepts and applications of organic chemistry in pharmaceuticals. Review your knowledge before the midterm!