BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) PDF
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University of Northern Philippines
Dr. Brendo Jandoc M.D.
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Summary
This document is a study guide on the metabolism of carbon skeletons and amino acids. It details the role of folic acid, biosynthesis of nonessential amino acids, and metabolic defects in amino acid metabolism, particularly focusing on phenylketonuria, maple syrup urine disease, albinism, homocystinuria, and alkaptonuria.
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1A BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) DR. BRENDO J...
1A BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) DR. BRENDO JANDOC M.D. OUTLINE B. Synthesis by amidation I. Role of Folic acid in amino acid metabolism Glutamine II. Biosynthesis of nonessential amino acid Contains an amide linkage with ammonia at the ϒ-carboxyl Synthesis from α-keto acids Formed from glutamine via glutamine synthetase Synthesis by amidation Requires ATP Proline Function: Serine, glycine, cysteine Protein synthesis tyrosine Nontoxic transport form of ammonia III. Metabolic defects in amino acid metabolism Asparagine Phenylketonuria Contains an amide linkage with ammonia at the β-carboxyl Maple syrup urine disease Formed from aspartate via asparagine synthetase Albinism Requires ATP Homocystinuria Equilibrium far in the direction of asparagine synthesis Alkaptonuria C. Proline Formed from glutamate ROLE OF FOLIC ACID IN AMINO ACID METABOLISM Cyclization and reduction reactions Synthetic pathways D. Serine, Glycine, and Cysteine Require addition of single carbon groups which exist in Serine different forms From 3-phosphoglycerate (intermediate of glycolysis) Formyl, methenyl, methylene, and methyl Oxidized to 3-phosphopyruvate Carried by Transaminated to 3-phosphoserine Tetrahydrofolate (THF) Formed from the hydrolysis of the phosphate ester S-adenosylmethionine (SAM) Can be formed from glycine One-carbon pool transfer of a hydroxymethyl group by serine Single carbon units attached to THF or SAM hydroxymethyl transferase N5,N10-methylene-THF as the one carbon donor A. FOLIC ACID: a carrier of one-carbon unit Glycine Tetrahydrofolic acid Synthesized from glycine Active form of folic acid Removal of hydroxymethyl group by serine Produced by dihydrofolate reductase hydroxymethyl transferase Two step reaction requiring 2 NADPH THF as the one carbon acceptor N5, N10 or both Cysteine Carbon containing unit Two consecutive reactions Folate deficiency Cystathione formation Present as megaloblastic anemia Serine + homocysteine cystathione Decreased availability of purines and TMP needed for DNA Cystathione hydrolysis synthesis Cystathione α-ketobutyrate and cysteine Homocysteine is derived from methionine (essential amino BIOSYNTHESIS OF NONESSENTIAL AMINO ACIDS acid) Synthesized from intermediates of metabolism From the essential amino acids E. Tyrosine Phenylalanine Tyrosine Formed from phenylalanine by phenylalanine hydroxylase Methionine Cysteine Requires molecular oxygen and tetrahydrobiopterin (BH 4) A. Synthesis from α-keto acids Oxygen becomes hydroxyl group of tyrosine Alanine, Aspartate, and Glutamate BH4 can be synthesized from GTP Transfer of an amino group to Oxidized to dihydrobiopterin (BH2) the α-keto acids BH4 regeneration (BH2 to BH4) (TRANSAMINATION – most direct NADH-requiring dihydropteridine reductase of the biosynthetic pathways) Formed from essential amino acid Via aminotransferases Nonessential in the presence of adequate dietary Glutamate can also be phenylalanine synthesized by the reverse of the oxidative deamination by METABOLIC DEFECTS IN AMINO ACID METABOLISM glutamate dehydrogenase Inborn errors of metabolism Commonly caused by mutant genes Trans FINALS 8b | Abacco, Alderite, Asistin, Balanza, Bayas, Biang 1 of 5 BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) Inherited defects Hypopigmentation Total loss of enzyme activity Fair hair Partial deficiency of catalytic activity Light skin color Untreated Blue eyes Mental retardation Hydroxylation of tyrosine by tyrosinase Harmful accumulation of metabolites Formation of Melanin Newborn screening Inhibited by the high levels of phenylalanine Screen for presence of amino acid disorders Test: Tandem mass spectrometry 2. Neonatal screening and diagnosis of PKU Sample: Blood obtained from heel stick Early diagnosis is important Disease is treatable by dietary means A. PHENYLKETONURIA Lack of neonatal symptom Deficiency in phenylalanine hydroxylase Neonatal screening Most common clinically encountered inborn error of metabolism However, infants have normal phenylalanine level Maternal clearance through the placenta May persist until newborn is exposed to 24-48 hour protein feeding SCREENING done after feeding to avoid false negative Laboratory test for elevated phenylalanine Quantitative determination of phenylalanine levels CONFIRMATORY 3. Prenatal diagnosis of PKU Classic PKU Accumulation of phenylalanine 100 or more different mutations in the gene that codes for Can also be caused by dihydropteridine reductase phenylalanine hydroxylase (PAH) deficiency (required to synthesize BH4) Often doubly heterozygous INDIRECT – BH4 acts as coenzyme for PAH has a different mutation in each allele Phenylalanine hydroxylase Tyrosine hydroxylase 4. Treatment of PKU Synthetic amino acid preparations low in phenylalanine Tryptophan hydroxylase Phenylalanine maintained close to normal range Synthesis of neurotransmitters such as Supplemented with natural food serotonin and catecholamine Fruit, vegetables, certain cereals Dietary restriction of phenylalanine Amount is adjusted according to tolerance Does not reverse CNS effects Earlier treatment = preventable neurologic damage Replacement therapy – improve clinical outcome Begin 7-10 days of life BH4 (coenzyme) Tyrosine becomes essential L-DOPA catecholamine Phenylalanine not converted to tyrosine 5-hydroxytryptophan serotonin Overzealous treatment must be avoided Phenylalanine below normal 1. Characteristics of classic PKU Lead to poor growth and neurologic symptom Elevate phenylalanine Discontinuance of treatment before 8 y/o and adults Present in tissue, plasma and urine Poor performance on IQ test Subsequent elevation of Treatment must be the LIFELONG phenyllactate, phenylacetate and phenylpyruvate 5. Maternal PKU Give urine it MUSTY or MOUSY Maternal PKU syndrome odor If women with PKU, not in diet, becomes pregnant CNS symptoms Present with microcephaly, mental retardation and Mental retardation congenital heart abnormality By the age of 1 Phenylalanine is teratogenic Rarely achieve IQ greater than 50 Dietary control must begin prior to conception Failure to walk or talk Maintain throughout pregnancy Seizure Hyperactivity Tremor Microcephaly Failure to grow B. MAPLE SYRUP URINE DISEASE Trans FINALS 8b | Abacco, Alderite, Asistin, Balanza, Bayas, Biang 2 of 5 BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) Rare autosomal recessive disorder Defect in metabolism of homocysteine Partial or complete deficiency of branched chain α-keto acid Deficiency in cystathione β-synthase dehydrogenase Autosomal recessive Decarboxylation of LIV (leucine, isoleucine, valine) High plasma and urine level of Accumulation of LIV homocysteine and methionine Toxic effect that interferes with brain function Low levels of cysteine Characteristics of disease Homozygous deficiency Feeding problems Exhibit ectopia lentis Vomiting (displacement of the lens of Dehydration the eye) Severe metabolic acidosis Skeletal abnormalities MAPLE SYRUP odor of urine Thrombus formation Osteoporosis 1. Classification Neurologic deficits Classic Treatment Most common type of MSUD Oral administration of vitamin B6 (coenzyme) Leukocytes of cultured skin fibroblasts Responsive Little or no branched chain α-keto acid dehydrogenase Milder and later onset of clinical symptoms Infants show symptoms within several days of life Nonresponsive Untreated lethal Restriction of methionine intake Intermediate form Supplementation with vitamins B6, B12 and folate. 3-15% enzyme activity Symptoms are milder E. ALKAPTONURIA Onset from infancy to adulthood Deficiency in homogentisic acid oxidase Thiamine-dependent variant In the degradative pathway of tyrosine Thiamine Accumulation in homogentisic acid Increases activity of the enzyme Not life-threatening But may be severely crippling 2. Screening and Diagnosis Prenatal diagnosis and neonatal screening 1. Symptoms Most individuals are compound heterozygotes Three characteristic symptoms Homogentisic aciduria 3. Treatment Oxidation of homogentisic acid Synthetic formula to a dark pigment in standing Limited amounts of leucine, isoleucine and valine Large joint arthritis Necessary for normal growth and development Black ochronotic pigmentation of Nontoxic levels cartilage and collagenous tissue Important energy source in times of metabolic need Usually asymptomatic until about 40 Early diagnosis and lifelong treatment y/o At risk of decompensation in periods of increased protein Dark staining of the diapers catabolism May indicate disease in infants C. ALBINISM 2. Treatment Defect in tyrosine metabolism Diets low in protein Deficiency in melanin Especially phenylalanine and Partial or full absence of pigment in tyrosine Skin, hair, and eyes Help reduce levels of homogentisic Inherited acid Autosomal recessive (primary) Decrease the amount of pigment Autosomal dominant deposited in body tissues X-linked Complete Albinism Tyrosinase-negative oculocutaneous albinism Deficiency of copper-requiring tyrosinase Total absence of pigment Most severe form Hypopigmentation, visual defect, and photophobia Increased risk for skin cancer D. HOMOCYTINURIA Trans FINALS 8b | Abacco, Alderite, Asistin, Balanza, Bayas, Biang 3 of 5 BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) SUMMARY: Trans FINALS 8b | Abacco, Alderite, Asistin, Balanza, Bayas, Biang 4 of 5 BIOCHEMISTRY AMINO ACIDS: METABOLISM OF CARBON SKELETON (Part 2) Trans FINALS 8b | Abacco, Alderite, Asistin, Balanza, Bayas, Biang 5 of 5