Enzymes PDF

Unit 5 - Enzymes 5.1 Enzymes What Are Enzymes? Enzymes are: Catalysts that speed up the rate of a chemical reaction without being changed or used up in the reaction Proteins Biological catalysts (biological because they are made in living cells, catalysts because they speed up...

Unit 5 - Enzymes 5.1 Enzymes What Are Enzymes? Enzymes are: Catalysts that speed up the rate of a chemical reaction without being changed or used up in the reaction Proteins Biological catalysts (biological because they are made in living cells, catalysts because they speed up the rate of chemical reactions without being changed) Necessary to all living organisms as they maintain reaction speeds of all metabolic reactions (all the reactions that keep an organism alive) at a rate that can sustain life For example, if we did not produce digestive enzymes, it would take around 2 - 3 weeks to digest one meal; with enzymes, it takes around 4 hours How Do Enzymes Work? Enzymes are specific to one particular substrate (molecule/s that get broken down or joined together in the reaction) as the enzyme is a complementary shape to the substrate The product is made from the substrate(s) and is released 5.2 Enzyme investigations Investigating the Effect of Temperature on Amylase Starch solution is heated to a set temperature Iodine is added to wells of a spotting tile Amylase is added to the starch solution and mixed well Every minute, droplets of solution are added to a new well of iodine solution This is continued until the iodine stops turning blue-black (this means there is no more starch left in the solution as the amylase has broken it all down)  Time taken for the reaction to be completed is recorded Experiment is repeated at different temperatures The quicker the reaction is completed, the faster the enzyme is working Investigating the Effect of pH on Amylase Place single drops of iodine solution in rows on the tile Label a test tube with the pH to be tested Use the syringe to place 2cm of amylase in the test tube Add 1cm of buffer solution to the test tube using a syringe Use another test tube to add 2cm of starch solution to the amylase and buffer solution, start the stopwatch whilst mixing using a pipette After 10 seconds, use a pipette to place one drop of mixture on the first drop of iodine, which should turn blue-black Wait another 10 seconds and place another drop of mixture on the second drop of iodine Repeat every 10 seconds until iodine solution remains orange-brown Repeat experiment at different pH values - the less time the iodine solution takes to remain orange-brown, the quicker all the starch has been digested and so the better the enzyme works at that pH 5.3 Enzyme action & specificity Enzyme Action & Specificity (Extended) Enzymes are specific to one particular substrate(s) as the active site of the enzyme, where the substrate attaches, is a complementary shape to the substrate This is because the enzyme is a protein and has a specific 3-D shape This is known as the lock and key hypothesis When the substrate moves into the enzyme’s active site they become known as the enzyme-substrate complex After the reaction has occurred, the products leave the enzyme’s active site as they no longer fit it and it is free to take up another substrate 1. Enzymes and substrates randomly move about in solution 2. When an enzyme and its complementary substrate randomly collide - with the substrate fitting into the active site of the enzyme - an enzyme-substrate complex forms, and the reaction occurs. 3. A product (or products) forms from the substrate(s) which are then released from the active site. The enzyme is unchanged and will go on to catalyse further reactions. 5.4 Enzymes & temperature Enzymes & Temperature (Extended) Enzymes are proteins and have a specific shape, held in place by bonds This is extremely important around the active site area as the specific shape is what ensures the substrate will fit into the active site and enable the reaction to proceed Enzymes work fastest at their ‘optimum temperature’ – in the human body, the optimum temperature is 37⁰C Heating to high temperatures (beyond the optimum) will break the bonds that hold the enzyme together and it will lose its shape -this is known as denaturation Substrates cannot fit into denatured enzymes as the shape of their active site has been lost Denaturation is irreversible - once enzymes are denatured they cannot regain their proper shape and activity will stop Increasing the temperature from 0⁰C to the optimum increases the activity of enzymes as the more energy the molecules have the faster they move and the number of collisions with the substrate molecules increases, leading to a faster rate of reaction This means that low temperatures do not denature enzymes, they just make them work more slowly 5.5 - Enzymes & pH Enzymes & pH (Extended)  The optimum pH for most enzymes is 7 but some that are produced in acidic conditions, such as the stomach, have a lower optimum pH (pH 2) and some that are produced in alkaline conditions, such as the duodenum, have a higher optimum pH (pH 8 or 9) If the pH is too high or too low, the bonds that hold the amino acid chain together to make up the protein can be destroyed This will change the shape of the active site, so the substrate can no longer fit into it, reducing the rate of activity Moving too far away from the optimum pH will cause the enzyme to denature and activity will stop