Synthetic Biology and Bioprocessing Quiz
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Questions and Answers

Which of the following is NOT an advantage of 3D bioprinting?

  • Decreased animal testing
  • Patient-specific treatments
  • Mimicking real structures
  • High pricing of technology (correct)
  • 3D bioprinting eliminates the need for ethical considerations in medical treatments.

    False

    What is one significant disadvantage of 3D bioprinting?

    High pricing or complexity.

    3D bioprinting can help to address the ___________ crisis by creating organs.

    <p>organ shortage</p> Signup and view all the answers

    Match the following aspects of 3D bioprinting with their respective classifications:

    <p>Decreased animal testing = Advantage Ethical concerns = Disadvantage Automation of complex processes = Advantage High energy consumption = Disadvantage</p> Signup and view all the answers

    What is a key advantage of RNA vaccines compared to conventional vaccines?

    <p>Faster speed of development</p> Signup and view all the answers

    RNA vaccines are only effective against COVID-19.

    <p>False</p> Signup and view all the answers

    Name one bacterium that mRNA vaccines are being developed against.

    <p>Mycobacterium tuberculosis</p> Signup and view all the answers

    MRNA vaccines can potentially be used in _____ therapy.

    <p>cancer</p> Signup and view all the answers

    Match the following RNA vaccine applications with their potential targets:

    <p>COVID-19 = SARS-CoV-2 spike protein Influenza = Influenza virus HSV-2 = Herpes simplex virus type 2 Zika virus = Zika virus</p> Signup and view all the answers

    What factor causes difficulties in using mRNA vaccines for bacterial diseases?

    <p>Difficulty in folding and transport of proteins</p> Signup and view all the answers

    The production of mRNA vaccines involves complex cellular processes.

    <p>False</p> Signup and view all the answers

    What was the time frame for the development and authorization of the Pfizer/BioNTech and Moderna's mRNA vaccines?

    <p>Under a year</p> Signup and view all the answers

    What is a major benefit of synthetic biology in crop domestication and breeding?

    <p>It speeds up the process of creating novel plant genomes.</p> Signup and view all the answers

    The enzyme RuBP carboxylase (Rubisco) is primarily responsible for the absorption of nitrogen in plants.

    <p>False</p> Signup and view all the answers

    What method has been used successfully in Arabidopsis thaliana to improve crop domestication?

    <p>CRISPR-Cas9</p> Signup and view all the answers

    The synthesis of a new carbon fixation pathway has been demonstrated by creating a synthetic _____ in vitro.

    <p>chloroplast</p> Signup and view all the answers

    Match the following terms with their descriptions.

    <p>Synthetic biology = Technology for altering living organisms Rubisco = Enzyme involved in carbon fixation Biofertilizers = Microorganisms used to enhance soil fertility Klebsiella oxytoca = Bacteria used in nitrogen fixation applications</p> Signup and view all the answers

    What percentage of the world's land surface is currently degraded?

    <p>33%</p> Signup and view all the answers

    Synthetic biology techniques are expected to have a positive impact on the environment while increasing crop yield.

    <p>True</p> Signup and view all the answers

    What is one application of synthetic biology in improving nitrogen utilization in crops?

    <p>Constructing a gene cluster based on the nif cluster from nitrogen-fixing bacteria.</p> Signup and view all the answers

    Which actuator modes are commonly used in extrusion-based bioprinting?

    <p>Pneumatic, Piston, Screw-driven</p> Signup and view all the answers

    All applications of bioprinting focus solely on regenerative medicine.

    <p>False</p> Signup and view all the answers

    Name one application of bioprinting that involves drug research.

    <p>Pharmacokinetics or drug screening</p> Signup and view all the answers

    Bioprinting can be used to fabricate _______ tissue and organ.

    <p>artificial</p> Signup and view all the answers

    What specific cell types were printed in the skin tissue example?

    <p>Fibroblasts and keratinocytes</p> Signup and view all the answers

    The dermis is the top layer of skin printed in bioprinting applications.

    <p>False</p> Signup and view all the answers

    Match the applications of bioprinting with their respective categories.

    <p>Cytobiology = Research on cell growth Drug research = Pharmacokinetics Tumor model = Tumorigenesis mechanisms Regenerative medicine = Artificial tissue manufacturing</p> Signup and view all the answers

    What technology is integrated to scan a wound for bioprinting skin cells?

    <p>Imaging technology</p> Signup and view all the answers

    What materials were co-printed for the muscle and tendon development in the integrated MTU construct?

    <p>Thermoplastic polyurethane and PCL</p> Signup and view all the answers

    Decellularized adipose tissue (DAT) matrix does not support tissue infiltration after implantation.

    <p>False</p> Signup and view all the answers

    What is the purpose of incorporating insulin-like growth factor (IGF) into the bio-ink containing myoblast cells?

    <p>To enhance muscle development and contraction.</p> Signup and view all the answers

    Human umbilical vein smooth muscle cells (HUVSMCs) are used to build __________ vascular grafts.

    <p>small-diameter</p> Signup and view all the answers

    Match the following components involved in bioprinting with their functions:

    <p>Thermoplastic polyurethane = Elasticity for muscle growth PCL = Stiffness for tendon development Agarose rods = Moulding template for vascular grafts Gelatin-based hydrogel = Encapsulation of cells</p> Signup and view all the answers

    Which type of cells were used in the scaffold-free vascular grafts?

    <p>Human umbilical vein smooth muscle cells</p> Signup and view all the answers

    The use of the decellularized adipose tissue (DAT) matrix resulted in chronic inflammation post-implantation.

    <p>False</p> Signup and view all the answers

    What is the purpose of bio-inks in 3D bioprinting?

    <p>To serve as a base material for printing living cells</p> Signup and view all the answers

    The bioprinted muscle can start contracting after __________ days of growth.

    <p>10</p> Signup and view all the answers

    Public acceptance of 3D bioprinting applications is universally high.

    <p>False</p> Signup and view all the answers

    Name one application of 3D bioprinting in the medical field.

    <p>3D printed skin or bone grafts</p> Signup and view all the answers

    3D bioprinting is classified into four main steps, including data acquisition, ________, printing, and post-processing.

    <p>bioprinting</p> Signup and view all the answers

    What is one disadvantage of certain medical applications of 3D bioprinting?

    <p>Access may be limited due to cost or location</p> Signup and view all the answers

    The bioprinted structures are more biologically relevant compared to __________ studies performed in 2D.

    <p>in vitro</p> Signup and view all the answers

    Match the following terms related to 3D bioprinting with their definitions:

    <p>Bio-inks = Materials used as base for printing living cells Organ transplantation = Surgical procedure to replace a failing organ X-ray = Imaging technique for data acquisition GrowInk™ = Customizable hydrogel-based bioink</p> Signup and view all the answers

    What are two common techniques used for data acquisition in 3D bioprinting?

    <p>X-ray and computed tomography (CT)</p> Signup and view all the answers

    Study Notes

    Introduction

    • Human needs change, so bioprocessing enables adaptation.
    • Synthetic biology and bioprinting diversify bioprocessing development.
    • This involves sectors like biopharmaceuticals, bioremediation, and food/beverage industry.

    Synthetic Biology

    • Design and construction of novel biological parts/devices/systems/machines/organisms.
    • Application for useful purposes.
    • Different from genetic engineering:
      • Genetic engineering manipulates DNA for a desired phenotype.
      • Synthetic biology applies engineering principles to create entire synthetic DNA molecules or organism parts.
    • Traditional genetic engineering makes small alterations.
    • Synthetic biology completely overhauls or creates new bioproducts.

    Applications in Biopharmaceuticals/Medicine

    • Diagnostic tools for early disease detection.
      • Early detection increases patient survival.
      • Conventional methods are slow and costly.
    • RNA molecule design to detect pathogenic sequences.
      • Generates detectable signals (e.g., fluorescence, color change).
    • Example: Toehold switches.
      • Bind to target sequences.
      • Trigger downstream reporter gene activation.
    • Used in diagnostics for various viral pathogens (e.g., SARS-CoV-2, West Nile, Zika, Ebola).
    • Living therapeutics (cell therapies):
      • Respond to environmental factors.
      • Include circulating cells, implantable cells, and tissue resident cells.
      • Improved T-cell therapies (e.g., CAR-T cells)
    • RNA vaccines for pathogen-specific antigen introduction.
      • Trigger immune responses against pathogens.
      • Have advantages over other methods (e.g., speed of development, scalability, safety).
      • Not limited to COVID-19.

    Applications in Agriculture

    • Important for food security in a crisis.
    • Synthetic biology offers new opportunities.
    • Crop domestication and breeding:
      • Traditional methods are slow and lengthy.
      • Synthetic biology helps create novel plant genomes.
    • Example: CRISPR-Cas9 for altering genomes in Arabidopsis.

    Applications in Manufacturing

    • Silk production:
      • Spider silks have extraordinary mechanical properties.
      • Synthetic biology can enable similar production in silkworms.
      • Products include bulletproof vests, ropes, nets, seatbelts, parachutes, and bandages.

    Applications in Conservation

    • Coral reefs are at risk due to climate crisis.
    • Synthetic biology can help re-design the DNA of coral for resilience to temperature increase.
    • Heat shock genes are a promising solution.

    Advantages of Using Synthetic Biology

    • Widely adaptable.
    • Holds potential to diagnose/treat diseases and improve industrial processes.
    • More equitable access to biotechnology (low-cost, widely available tools).
    • Could support endangered species conservation.

    Limitations of Synthetic Biology

    • Safety and security concerns (potential for misuse).
    • Environmental effects (unintended consequences on ecosystems).
    • Public acceptance and access (concerns about interfering with nature and unintended effects of using synthetic organisms).

    3D Bioprinting

    • Additive manufacturing process using bio-inks to print living cells.
    • Mimics tissue and organ structures.
    • Uses bio-inks made of natural or synthetic materials.
      • Can be combined with living cells.
    • Applications:
      • Cytobiology
      • Drug research
      • Tumor models
      • Regenerative medicine (e.g., skin, bone, cartilage).

    Process of 3D Bioprinting

    • Data acquisition (e.g., X-ray, CT, MRI scans to create 3D models).
    • Material selection (materials and cells vary based on the structure to be built).
    • Bioprinting (actual 3D printing process).
    • Functionalization (making connections and generating functions).

    Advantages of 3D Bioprinting

    • Mimicking real tissue/organ structures.
    • Personalized treatments.
    • Improved drug testing and development (fewer animal models).
    • Automating complex processes and reducing errors.

    Disadvantages of 3D Bioprinting

    • High cost and complexity.
    • Maintaining cell environments.
    • Ethical concerns.

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    Synthetic Biology Notes PDF

    Description

    Test your knowledge on synthetic biology and its applications in bioprocessing. This quiz will cover topics related to biopharmaceuticals, bioremediation, and the innovations brought by synthetic biology in creating novel organisms and devices. Understand the differences between synthetic biology and traditional genetic engineering.

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