27 Questions
In which circumstances do amino acids undergo oxidative degradation?
When amino acids are released during protein turnover and are not needed for new protein synthesis
What is the primary purpose of the urea cycle?
To make and excrete urea
Under which condition are cellular proteins used as fuel?
When carbohydrates are either unavailable or not properly utilized
What happens to ingested amino acids that exceed the body's needs for protein synthesis?
They undergo oxidative degradation
What is the primary fate of amino acids released during protein turnover if they are not needed for new protein synthesis?
They are oxidized to produce energy
What is the primary function of aminopeptidase and carboxypeptidases in the small intestine?
To degrade large peptides into smaller peptides and amino acids
What is the consequence of the carbon skeleton of an amino acid entering the citric acid cycle?
The carbon skeleton is oxidized to produce energy
Why is urea a more suitable excretory product than ammonia?
Urea is less toxic than ammonia
What is the role of pyridoxal phosphate (PLP) in amino acid catabolism?
It acts as a cofactor for transaminases
What is the temporary storage of nitrogen in the form of an amino group?
Glutamate
What is the primary function of glutaminase in the liver mitochondria?
To convert glutamine to glutamate
Why is free ammonia toxic, especially to the brain?
It crosses the blood-brain barrier and accumulates in cells
What is the fate of the ammonia liberated from glutamine in the liver mitochondria?
It is converted to urea and excreted
What is the result of excess K+ entering neurons through the Na+-K+-2Cl- cotransporter 1?
Altered neuronal response to GABA
What is the source of the first amino group of urea?
Free ammonia released from glutamine
What is the consequence of NH4+ competing with K+ for transport into astrocyte cells?
Elevated extracellular concentration of K+
What is the total energy cost of producing urea from ammonia in the five enzymatic steps of the urea cycle?
4 molecules of ATP
What is the equivalent energy cost of the ATP to AMP + PPi conversion followed by the conversion of PPi to 2 Pi in the urea cycle?
2 molecules of ATP
How many molecules of ATP are generated from the re-oxidation of the NADH produced during the conversion of fumarate to malate in the citric acid cycle?
2.5 ATP
What is the purpose of the aspartate-argininosuccinate shunt in the interconnected urea and citric acid cycles?
To link the fates of the amino groups and the carbon skeletons of amino acids
What is the name given to the interconnected urea and citric acid cycles due to their complex interconnections?
Krebs bicycle
What is the primary function of glutamate dehydrogenase in the liver?
To remove ammonia from glutamate for urea excretion
In which cellular compartment does glutamate undergo oxidative deamination?
Mitochondrial matrix
What is the primary electron acceptor for the glutamate dehydrogenase reaction?
NAD+ or NADP+
In the muscle, what is the fate of ammonia collected in glutamate?
It is donated to pyruvate to form alanine
What is the effect of ADP on glutamate dehydrogenase activity?
Activation
What is the ultimate fate of alpha-ketoglutarate formed in the glutamate dehydrogenase reaction?
It is oxidized as fuel in the citric acid cycle
Study Notes
Transaminases and Glutamate Dehydrogenase
- The tests typically measure two transaminases: sGOT (serum glutamate-oxaloacetate transaminase, also called aspartate aminotransferase, AST) and sGPT (serum glutamate-pyruvate transaminase, also called alanine aminotransferase, ALT).
- In the liver, glutamate is transported from the cytosol to mitochondria and is deaminated by oxidative deamination within the mitochondrial matrix, forming α-ketoglutarate.
- Glutamate dehydrogenase (GDH) can use either NAD+ or NADP+ as an electron acceptor.
- Ammonia is processed into urea for excretion.
- The pathway for ammonia excretion is a transdeamination = transamination (transaminases) + oxidative deamination (GDH).
Glutamate Dehydrogenase and Carbon-Nitrogen Metabolism
- Glutamate dehydrogenase operates at an important intersection in carbon and nitrogen metabolism.
- α-ketoglutarate made by the GDH reaction can be oxidized as fuel (in the citric acid cycle) or serve as a glucose precursor in gluconeogenesis (through oxaloacetate).
- Glutamate dehydrogenase is allosterically:
- Activated by ADP (at low glucose or energy levels, increasing amino acid degradation and using carbon skeletons for energy)
- Inhibited by GTP (at high levels of α-ketoglutarate)
Ammonia Metabolism in Muscle
- In the muscle, ammonia collected in glutamate is donated to pyruvate to make alanine.
- Vigorously working muscles rely on glycolysis for energy, producing pyruvate.
- To avoid lactic acid build-up, pyruvate can be converted to alanine (by taking up the amino group from glutamate) for transport into the liver.
- Once in the liver, alanine releases its amino group, leading to pyruvate, which is used to produce glucose.
Amino Acid Oxidation and Urea Production
- Amino acid oxidation occurs when:
- Amino acids released during protein turnover are not needed for new protein synthesis
- Ingested amino acids exceed the body's needs for protein synthesis
- Cellular proteins are used as fuel because carbohydrates are either unavailable (starvation) or not properly utilized (disease, e.g., diabetes)
- Dietary proteins are enzymatically hydrolyzed into amino acids.
- The amino groups and the carbon skeleton take separate but interconnected pathways:
- The amino group enters the urea cycle and nitrogen is excreted in the form of urea.
- The carbon skeleton enters the citric acid cycle to be oxidized.
Metabolic Fates of Amino Groups
- Ammonia is toxic, and urea is far less toxic and has very high solubility.
- The amino group is transferred to α-ketoglutarate, forming L-glutamate, catalyzed by aminotransferases or transaminases, which use the pyridoxal phosphate (PLP) cofactor.
- Glutamate acts as a temporary storage of nitrogen (in its amino group) and can donate the amino group to form urea for amino acid biosynthesis when needed.
Urea Cycle and Nitrogen Excretion
- The urea cycle produces urea from ammonia in five enzymatic steps, requiring 4 molecules of ATP.
- The energy cost is made up by converting fumarate to malate (see citric acid cycle) and the GDH reaction.
- The aspartate-argininosuccinate shunt (linking the citric acid and urea cycles) effectively links the fates of the amino groups and the carbon skeletons of amino acids.
- The interconnections between the urea and citric acid cycles are even more elaborate than the arrows suggest.
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