Plant Virus Transmission Mechanisms
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Questions and Answers

Which virus family is associated with persistent transmission in plant viruses?

  • Umbravirus (correct)
  • Rhabdoviridae
  • Luteovirus (correct)
  • Nanovirus (correct)

What type of viral transmission does Rhabdoviridae exhibit?

  • Transitory
  • Propagative (correct)
  • Persistent
  • Non-propagative

Which of the following is NOT involved in receptor-mediated endocytosis for luteovirus acquisition?

  • Apical plasmalemma
  • Coated vesicles
  • Basal plasmalemma
  • Rhabdoviridae (correct)

In the context of viral transmission, which term best describes the mechanism of regulating vector-specific luteovirus acquisition?

<p>Receptor-mediated endocytosis (D)</p> Signup and view all the answers

What characterizes non-propagative viruses among the listed options?

<p>They do not replicate within the vector. (B)</p> Signup and view all the answers

What is a primary characteristic of non-persistent virus transmission in plants?

<p>Viruses are transmitted instantly upon plant contact. (B)</p> Signup and view all the answers

In the context of plant-virus-vector interactions, what distinguishes persistent transmission from the others?

<p>Vectors can carry the virus without symptoms. (C)</p> Signup and view all the answers

Which molecular mechanism is primarily involved in the persistent transmission of viruses?

<p>Long-term association with vector salivary glands. (D)</p> Signup and view all the answers

Which of the following is NOT a mode of plant-virus-vector interaction?

<p>Permanent transmission (A)</p> Signup and view all the answers

What is the primary purpose of PCR in molecular biology?

<p>To photocopy DNA in vitro (A)</p> Signup and view all the answers

Which component was replaced by thermostable DNA polymerase in the advancements of PCR?

<p>Klenow polymerase (C)</p> Signup and view all the answers

What is a common consequence of semi-persistent virus transmission in plants?

<p>The virus remains in the vector for a shorter duration than persistent transmission. (D)</p> Signup and view all the answers

Which phase of PCR is characterized by a limited number of target sites and a large number of primer copies?

<p>Early cycles (A)</p> Signup and view all the answers

During which step of PCR does the double-stranded DNA separate into single strands?

<p>Denaturation (C)</p> Signup and view all the answers

At what temperature does the annealing phase typically occur in the standard PCR protocol?

<p>55ËšC (B)</p> Signup and view all the answers

Where does the virus primarily replicate in the body?

<p>Midgut epithelial cells (D)</p> Signup and view all the answers

What two pathways can the virus use to invade other tissues?

<p>Via the nervous system and hemolymph (B)</p> Signup and view all the answers

Which of the following correctly describes the route of the virus from its replication site?

<p>It moves through the hemolymph and/or the nervous system. (B)</p> Signup and view all the answers

What is the significance of the principal salivary glands in the viral life cycle?

<p>They serve as a transmission route for the virus. (B)</p> Signup and view all the answers

Which cell type is primarily affected by the initial viral replication?

<p>Epithelial cells in the midgut (B)</p> Signup and view all the answers

What role do the 5' and 3' noncoding sequences play in ssRNA viruses?

<p>They may be involved in more than one function. (B)</p> Signup and view all the answers

Which of the following best describes the function of noncoding sequences in ssRNA viruses?

<p>They participate in the synthesis of subgenomic RNA. (A)</p> Signup and view all the answers

How do noncoding sequences in ssRNA viruses influence viral functions?

<p>They can regulate multiple viral functions. (C)</p> Signup and view all the answers

Which statement accurately reflects the role of the 5' and 3' noncoding regions in TMV?

<p>They contribute to the complexity of the virus's lifecycle. (D)</p> Signup and view all the answers

What is a key feature of the noncoding sequences in ssRNA viruses like TMV?

<p>They can serve multiple roles within the virus's biology. (A)</p> Signup and view all the answers

What is the primary function of the HC-Pro protein in Potyvirus?

<p>Insect transmission (B)</p> Signup and view all the answers

Which protein is involved in the RNA replication process in Potyvirus?

<p>CI (D)</p> Signup and view all the answers

How many open reading frames (ORFs) are present in the genome of Potato virus X?

<p>5 (B)</p> Signup and view all the answers

What is the molecular weight of the viral coat protein (CP) in Potyvirus?

<p>30 kDa (B)</p> Signup and view all the answers

What type of RNA virus is the Potato yellow dwarf virus classified as?

<p>Single-stranded negative-sense RNA virus (A)</p> Signup and view all the answers

Which protein is suggested to have an unknown function in the Potyvirus genome?

<p>6K1 (B)</p> Signup and view all the answers

What is the role of the P3-PIPO protein in Potyvirus?

<p>Cell-to-cell movement (D)</p> Signup and view all the answers

What type of virus is a member of the Potexvirus family?

<p>Potato virus X (B)</p> Signup and view all the answers

Flashcards

Viral Replication

The process by which a virus makes copies of itself within a host cell.

Midgut

The middle part of the digestive system where food is further broken down.

Midgut Epithelial Cells

Cells lining the midgut that play a crucial role in digestion and absorption.

Hemolymph

Fluid that circulates throughout the body of insects, similar to blood in vertebrates.

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Nervous System

A network of nerves that control and coordinate bodily functions.

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Polymerase Chain Reaction (PCR)

A technique used to amplify specific DNA segments in a test tube. It involves repeating cycles of denaturation, annealing, and extension, allowing for exponential multiplication of the target DNA sequence.

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Denaturation

The initial stage of PCR, where the double-stranded DNA template is heated to separate the two strands.

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Annealing

The process where primers bind to their complementary sequences on the single-stranded DNA template, initiating DNA synthesis.

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Extension

The stage where a DNA polymerase enzyme extends the primers, adding nucleotides to build new DNA strands complementary to the template strands.

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Taq Polymerase

A thermostable DNA polymerase enzyme used in PCR, able to withstand the high temperatures during denaturation cycles without losing activity.

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CaMV

A type of plant virus commonly studied in research.

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Propagative transmission

A method of virus transmission where the virus can be passed down through generations of the insect vector.

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Non-propagative transmission

A method of virus transmission where the virus doesn't reproduce within the insect vector, but is simply carried.

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Nanovirus, Umbravirus, Luteovirus

A specific type of virus that uses non-propagative transmission.

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Receptor-mediated endocytosis

This is a way that some viruses can enter cells, using special proteins and a process called endocytosis.

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5' and 3' Noncoding Sequences

The non-coding regions at the beginning (5' end) and end (3' end) of a single-stranded RNA (ssRNA) virus's genome.

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Subgenomic RNA

A type of RNA molecule that is smaller than the full-length genome of a virus.

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Subgenomic RNA Synthesis

The process by which a subgenomic RNA is made from a viral genome.

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Tobacco Mosaic Virus (TMV)

A plant virus that affects tobacco plants.

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Functions of 5' and 3' Noncoding Sequences

The 5' and 3' noncoding sequences in ssRNA viruses can have multiple functions. In the case of TMV, these sequences play a role in the synthesis of subgenomic RNA.

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Non-persistent transmission

The virus attaches to the vector's mouthparts, but does not replicate inside the vector. It is simply carried to the next host plant.

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Semi-persistent transmission

The virus replicates inside the vector, but not as much as in persistent transmission. The vector can transmit the virus for a limited time after acquiring it.

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Persistent transmission

A virus replicates inside the vector and is transmitted to new plants for an extended period. Vector's offspring can also inherit the virus.

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Plant-Virus-Vector Interactions

The interaction between a plant, a virus, and a vector insect, leading to the spread of the virus in plant populations.

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Molecular Mechanisms of Plant-Virus-Vector Interactions

The specific mechanisms by which viruses attach to and are carried by insect vectors.

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Rhabdoviridae

A virus family known for its rod-like or bullet-shaped structure, containing a single-stranded RNA genome.

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Nucleorhabdovirus

A genus within the Rhabdoviridae family, infecting plants and causing diseases like potato yellow dwarf.

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RdRp motif

A protein motif found in viral RNA-dependent RNA polymerases (RdRPs), crucial for replicating the viral genome.

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Helicase motif

A protein motif involved in the replication of viral RNA, specifically in unwinding the double-stranded RNA helix.

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Methyl transferase motif

A protein motif involved in the transfer of a methyl group to a molecule, often important in viral protein modification.

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Viral RNA polymerase (RdRp)

A particular type of viral protein involved in the replication of viral RNA, acting as a replicase.

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Coat Protein (CP) sgRNA

A type of RNA molecule found in some viruses, containing genetic information for the protein coat and other essential viral proteins.

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Study Notes

Plant Virus Transmission Mechanisms

  • Plant viruses can be transmitted through various methods, including mechanical, seed, pollen, vegetative propagation, grafting, and dodder.

Mechanical Transmission

  • This method involves physical contact between infected and healthy plants.
  • Viruses can spread through contaminated tools, vectors, or plant fluids.
  • This is a common way for many viruses to spread, but it's not the most efficient.

Seed Transmission

  • Some viruses can infect developing embryos by direct invasion after fertilization or indirect invasion by infecting the gametes before fertilization.
  • The percentage of seed transmission depends on the virus, the host plant, the time of infection of the mother plant, and the seed's age.
  • The distribution of virus-infected seeds in infected mother plants is random.

Pollen Transmission

  • Viruses can be transmitted through pollen from infected plants to healthy ones; in this manner, viruses can spread quickly and widely.

Vegetative Propagation

  • Transmission occurs through growing processes such as stem cuttings, root grafts, or other plant propagation methods.
  • This is a common method for certain virus types to spread and infect numerous plants.

Grafting

  • Viruses can be transmitted when propagating by grafting plants.
  • The virus spreads rapidly and widely through the grafting process.

Dodder

  • A parasitic plant (dodder) can transmit viruses through its parasitic relationships.

Transmission by Invertebrates

  • Arthropoda (Insects):
    • Insecta (e.g., aphids, leafhoppers, planthoppers, cicadas) are the most common insect vectors.
    • Arachnida (e.g., spider mites, and eriophyid mites) are also commonly involved.
  • Nematodes:
    • Nematodes can also transmit some plant viruses.

Viral Genome Organization and Strategies

  • A. General Properties of Plant Viral Genomes: Plant viruses may have single or multiple genomic RNA/DNA pieces.
    • Kind of NA: The type of nucleic acid (RNA or DNA) in the virus.
    • Number of genome pieces (components): The number of distinct RNA/DNA segments in the virus.
    • Terminal structures: Often have specific sequences at the ends of their RNA or DNA.
    • nt sequence: Specific order of nucleotides.
    • Regulatory signals: Sequences that regulate viral gene expression.
    • mRNAs: The messenger RNA molecules produced during viral transcription.
  • B. Coding regions: Areas of the genome containing genes for viral proteins.
    • initiation codon: (AUG, AUU, CUG) Start codon for protein synthesis.
    • stop codon: (UAA, UAG, UGA) Stop codon for protein synthesis.
  • C. Non-coding regions: Areas in the genome that do not encode proteins; these regions may have important roles, such as regulatory sequences.
    • End-group structures: Structures at the ends of the RNA/DNA molecule.
    • 3′ and 5′ non-coding regions (NCR): Non-coding regions located on the 3' and 5' ends of the genome.
    • Intergenic regions: Non-coding regions between genes.
  • 1. Subgenomic RNAs: Some viruses generate smaller RNA molecules from one larger genome RNA molecule. These are used to make sub-genomic mRNAs.
  • 2. Polyprotein strategy: Some viruses make long proteins (polyproteins) that are then cut into smaller, functional proteins.
  • 3. Multi-partite genomes: Some viruses have multiple RNA or DNA molecules (segments). All these segments are packaged in the same virion.
  • 4. Internal initiation: Some viruses can initiate translation at internal ribosome entry sites (IRES) instead of the normal 5' cap-dependent method.
  • 5. Leaky scanning: This approach allows the ribosome to continue translating into a new open reading frame (ORF) upon encountering a stop codon in one ORF.
  • 6. Read-through: Ribosomes sometimes ignore a stop codon and continue translating into another ORF.
  • 7. Frame-shift: A change in the reading frame during translation.
  • 8. Splicing: A process where non-coding regions are removed from a viral mRNA molecule before it's translated into protein.

Viral Protein Functions

  • Viral proteins can be structural (forming parts of the virus particle) or functional (enzymes involved in various viral processes, such as replication or movement). They can also play other specific tasks such as interacting with host cells and/or the host's immune systems.

Virus Replication

  • Replicative intermediate (RF): Intermediate stage in replication.
  • Semiconservative replication: Each new DNA molecule contains one original strand and one new strand.
  • Conservative replication: Each new DNA molecule consists of two new strands formed from an original.

Transmission characteristics

  • Site of transmission: The place where transmission happens (e.g., foregut, midgut, etc.).
  • Type of transmission: How the virus is transmitted between plants or vectors.
  • Virus product interacting with vector: This refers to specific factors.
  • Acquisition time: Estimated time the vector takes to acquire the virus.
  • Retention time: How long the vector retains the virus.
  • Viruses in vector hemolymph: The presence of virus in the insect's hemolymph.
  • Latent period: Time between acquisition and symptom expression.
  • Transovarial transmission: Transmission of the virus from an infected mother to her offspring .
  • Transmission characteristics: The way in which the virus spreads.

Additional Notes

  • Plant viruses use various mechanisms to move systemically and infect the plant’s cells.
  • Many plant viruses rely on invertebrate vectors that carry viruses between infected plants and healthy ones.

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Description

Explore the various methods of plant virus transmission, including mechanical, seed, pollen, and other propagation techniques. Understand the efficiency and processes involved in each transmission mechanism in this informative quiz. Test your knowledge on how plant viruses spread and affect agriculture.

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