Podcast
Questions and Answers
What structural aspect of an enzyme is most critical to its function?
What structural aspect of an enzyme is most critical to its function?
- The presence of specific peptide bonds.
- Its amino acid sequence.
- Its 3D structure. (correct)
- Its overall size and molecular weight.
Enzymes increase the rate of reaction by lowering what?
Enzymes increase the rate of reaction by lowering what?
- The overall energy of the system.
- The activation energy. (correct)
- The equilibrium constant.
- The concentration of products.
Which of the following is true regarding uncatalyzed reactions?
Which of the following is true regarding uncatalyzed reactions?
- They tend to be faster than catalyzed reactions.
- They tend to be slow. (correct)
- They do not require activation energy.
- They proceed at the same rate as catalyzed reactions.
What environmental conditions are most suitable for enzyme function?
What environmental conditions are most suitable for enzyme function?
What is the induced fit model?
What is the induced fit model?
What might be needed in addition to amino acids for some enzymes to function?
What might be needed in addition to amino acids for some enzymes to function?
What is the primary consequence if human enzymes malfunction?
What is the primary consequence if human enzymes malfunction?
Enzymes are known to catalyze almost every reaction within which system?
Enzymes are known to catalyze almost every reaction within which system?
Why are enzymes highly specific and efficient compared to industrial catalysts?
Why are enzymes highly specific and efficient compared to industrial catalysts?
What happens to an enzyme if it is denatured or dissociated?
What happens to an enzyme if it is denatured or dissociated?
What is the role of digestive enzymes in the body?
What is the role of digestive enzymes in the body?
In what industries might enzymes be commonly found and used?
In what industries might enzymes be commonly found and used?
Which of the following represents the correct sequence of events in enzyme catalysis according to the induced fit model?
Which of the following represents the correct sequence of events in enzyme catalysis according to the induced fit model?
How do enzymes provide an alternative reaction pathway?
How do enzymes provide an alternative reaction pathway?
Given that enzymes function optimally under specific conditions, what would likely happen if an enzyme were moved from its optimal temperature to a much higher temperature?
Given that enzymes function optimally under specific conditions, what would likely happen if an enzyme were moved from its optimal temperature to a much higher temperature?
If a reaction that is normally catalyzed by an enzyme in the human body began to occur at a significantly reduced rate, what factor might be responsible?
If a reaction that is normally catalyzed by an enzyme in the human body began to occur at a significantly reduced rate, what factor might be responsible?
A scientist discovers a new enzyme. Preliminary studies show it functions best at a pH of 2.0. In what part of the human body might this enzyme be most active?
A scientist discovers a new enzyme. Preliminary studies show it functions best at a pH of 2.0. In what part of the human body might this enzyme be most active?
In the context of industrial applications, why might an enzyme be preferred over a traditional chemical catalyst?
In the context of industrial applications, why might an enzyme be preferred over a traditional chemical catalyst?
If a genetic mutation caused a change in the amino acid sequence of an enzyme but did not significantly alter its 3D structure, what would be the most likely outcome?
If a genetic mutation caused a change in the amino acid sequence of an enzyme but did not significantly alter its 3D structure, what would be the most likely outcome?
Why do enzymes not get consumed during a reaction?
Why do enzymes not get consumed during a reaction?
According to the 'RNA world hypothesis', what dual role did RNA play in early evolutionary life?
According to the 'RNA world hypothesis', what dual role did RNA play in early evolutionary life?
What is the role of metal ions like $Fe^{2+}$ or $Zn^{2+}$ in enzyme activity?
What is the role of metal ions like $Fe^{2+}$ or $Zn^{2+}$ in enzyme activity?
How do coenzymes primarily function in enzymatic reactions?
How do coenzymes primarily function in enzymatic reactions?
Many coenzymes are derived from what class of biomolecules?
Many coenzymes are derived from what class of biomolecules?
In redox reactions, what role does $NAD^+$ play, and in what forms does it exist?
In redox reactions, what role does $NAD^+$ play, and in what forms does it exist?
What distinguishes ribozymes from other enzymes?
What distinguishes ribozymes from other enzymes?
What is the purpose of cofactors in enzymatic reactions?
What is the purpose of cofactors in enzymatic reactions?
How does $Zn^{2+}$ facilitate the reaction catalyzed by alcohol dehydrogenase?
How does $Zn^{2+}$ facilitate the reaction catalyzed by alcohol dehydrogenase?
What kind of role can cofactors play in the structure of enzymes?
What kind of role can cofactors play in the structure of enzymes?
Hammerhead ribozymes are known for what specific function?
Hammerhead ribozymes are known for what specific function?
What is the role of inorganic ions such as $Cu^{2+}$ or $Fe^{3+}$?
What is the role of inorganic ions such as $Cu^{2+}$ or $Fe^{3+}$?
What chemical groups are biotin and coenzyme A responsible for transferring?
What chemical groups are biotin and coenzyme A responsible for transferring?
What enzyme is zinc commonly a cofactor for?
What enzyme is zinc commonly a cofactor for?
What do flavin adenine dinucleotide and lipoate have in common?
What do flavin adenine dinucleotide and lipoate have in common?
What precursor is thiamine pyrophosphate derived from?
What precursor is thiamine pyrophosphate derived from?
What chemical groups are transferred by tetrahydrofolate?
What chemical groups are transferred by tetrahydrofolate?
What enzymes involve potassium ions $(K^+)$ as cofactors?
What enzymes involve potassium ions $(K^+)$ as cofactors?
What enzymes involve magnesium ions $(Mg^{2+})$ as cofactors?
What enzymes involve magnesium ions $(Mg^{2+})$ as cofactors?
What vitamin is flavin adenine dinucleotide derived from?
What vitamin is flavin adenine dinucleotide derived from?
What class of molecule are coenzymes?
What class of molecule are coenzymes?
What characteristic distinguishes prosthetic groups from coenzymes?
What characteristic distinguishes prosthetic groups from coenzymes?
Which of the following best describes the function of the active site of an enzyme?
Which of the following best describes the function of the active site of an enzyme?
What is the functional difference between an apoenzyme and a holoenzyme?
What is the functional difference between an apoenzyme and a holoenzyme?
According to the classification of enzymes, what type of reaction do hydrolases catalyze?
According to the classification of enzymes, what type of reaction do hydrolases catalyze?
If an enzyme's active site surface is lined with amino acid residues, what is the primary purpose of these residues?
If an enzyme's active site surface is lined with amino acid residues, what is the primary purpose of these residues?
Why is it essential for all components to be present for an enzyme to function effectively?
Why is it essential for all components to be present for an enzyme to function effectively?
In what way may the active site sometimes sequester the substrate?
In what way may the active site sometimes sequester the substrate?
If an enzyme is classified as a lyase, what type of reaction does it catalyze?
If an enzyme is classified as a lyase, what type of reaction does it catalyze?
How do enzymes recognize their specific substrates?
How do enzymes recognize their specific substrates?
What role do metal ions play when they act as cofactors?
What role do metal ions play when they act as cofactors?
If an enzyme is classified as an oxidoreductase, what type of reaction does it catalyze?
If an enzyme is classified as an oxidoreductase, what type of reaction does it catalyze?
If an enzyme is classified as a transferase, what type of reaction does it catalyze?
If an enzyme is classified as a transferase, what type of reaction does it catalyze?
If an enzyme is classified as an isomerase, what type of reaction does it catalyze?
If an enzyme is classified as an isomerase, what type of reaction does it catalyze?
Given that chymotrypsin is a protease that catalyzes hydrolysis of peptide bonds, what type of amino acids is it most specific for?
Given that chymotrypsin is a protease that catalyzes hydrolysis of peptide bonds, what type of amino acids is it most specific for?
How does the enzyme's active site ensure substrate specificity?
How does the enzyme's active site ensure substrate specificity?
What is the role of cosubstrates in enzyme-catalyzed reactions?
What is the role of cosubstrates in enzyme-catalyzed reactions?
Which statement best summarizes how enzymes contribute to metabolic processes?
Which statement best summarizes how enzymes contribute to metabolic processes?
What determines the specificity of an enzyme for its substrate?
What determines the specificity of an enzyme for its substrate?
Why is the precise positioning of the substrate within an enzyme's active site critical for catalysis?
Why is the precise positioning of the substrate within an enzyme's active site critical for catalysis?
How do enzymes affect the equilibrium of a reaction?
How do enzymes affect the equilibrium of a reaction?
What must be overcome for a reaction to occur?
What must be overcome for a reaction to occur?
How does the presence of an enzyme affect the Gibbs free energy change (ΔG) of a reaction?
How does the presence of an enzyme affect the Gibbs free energy change (ΔG) of a reaction?
What is the relationship between the activation energy (Ea) of a reaction and its reaction rate?
What is the relationship between the activation energy (Ea) of a reaction and its reaction rate?
In enzymatic reactions, what is represented by ES and EP?
In enzymatic reactions, what is represented by ES and EP?
What happens to the amino acid side chains of an enzyme if the pH is outside of its optimal range?
What happens to the amino acid side chains of an enzyme if the pH is outside of its optimal range?
Which of the following statements accurately describes the role of enzymes in a chemical reaction?
Which of the following statements accurately describes the role of enzymes in a chemical reaction?
How is Gibbs free energy related to enthalpy (H), temperature (T), and entropy (S)?
How is Gibbs free energy related to enthalpy (H), temperature (T), and entropy (S)?
Pepsin, an endopeptidase found in the stomach, is optimally active at what pH?
Pepsin, an endopeptidase found in the stomach, is optimally active at what pH?
In a reaction coordinate diagram, what does the transition state represent?
In a reaction coordinate diagram, what does the transition state represent?
How does the environment impact the reaction?
How does the environment impact the reaction?
What are endopeptidases known to do?
What are endopeptidases known to do?
Where is G6P, which hydrolyzes gluc-6-phosphate to produce glucose + free phosphate, found?
Where is G6P, which hydrolyzes gluc-6-phosphate to produce glucose + free phosphate, found?
According to the material, the rate of a reaction will increase when:
According to the material, the rate of a reaction will increase when:
Compared to the uncatalyzed reaction, the catalyzed reaction will have a:
Compared to the uncatalyzed reaction, the catalyzed reaction will have a:
In reactions, enzymes are:
In reactions, enzymes are:
According to the image, what is equal to the ground state?
According to the image, what is equal to the ground state?
Which statement is correct regarding enzymatic reaction in regards to the substrate, S, becoming a product, P?
Which statement is correct regarding enzymatic reaction in regards to the substrate, S, becoming a product, P?
According to the image, in a simple reaction, what is the last item to be produced?
According to the image, in a simple reaction, what is the last item to be produced?
When old bonds are broken and new bonds are formed, energy is:
When old bonds are broken and new bonds are formed, energy is:
Flashcards
Enzymes as catalysts
Enzymes as catalysts
Enzymes are biological catalysts that increase the rate of reaction without being consumed.
Enzyme structure
Enzyme structure
Enzymes are usually proteins, and their activity depends on the integrity of their 3D structure.
Denatured Enzymes
Denatured Enzymes
When enzymes are denatured or dissociated, they won't work.
Reaction speed
Reaction speed
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Enzyme specificity
Enzyme specificity
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Optimal conditions
Optimal conditions
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Enzymes in digestion
Enzymes in digestion
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Enzymes' role in cells
Enzymes' role in cells
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Enzyme malfunction
Enzyme malfunction
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Enzymes in industry
Enzymes in industry
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Activation energy
Activation energy
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Enzyme helpers
Enzyme helpers
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Catalytic RNA
Catalytic RNA
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RNA world hypothesis
RNA world hypothesis
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Cofactors
Cofactors
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Coenzymes
Coenzymes
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Ribozymes
Ribozymes
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NAD
NAD
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Cofactor & coenzyme necessity
Cofactor & coenzyme necessity
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Prosthetic Groups
Prosthetic Groups
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Holoenzyme
Holoenzyme
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Apoenzyme
Apoenzyme
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Active Site
Active Site
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Substrates
Substrates
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Active site surface
Active site surface
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Active site (AS)
Active site (AS)
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Chymotrypsin
Chymotrypsin
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Oxidoreductases
Oxidoreductases
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Oxidoreductases
Oxidoreductases
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Transferases
Transferases
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Hydrolases
Hydrolases
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Lyases
Lyases
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Isomerases
Isomerases
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Ligases
Ligases
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Cofactor types
Cofactor types
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S → P and ΔG
S → P and ΔG
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Ground State
Ground State
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Activation Energy Barrier (ΔG‡)
Activation Energy Barrier (ΔG‡)
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Transition State (‡)
Transition State (‡)
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Ea and Reaction Rate
Ea and Reaction Rate
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Enzymes' Impact
Enzymes' Impact
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Enzymatic Reaction Equation
Enzymatic Reaction Equation
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Gibbs Free Energy Equation
Gibbs Free Energy Equation
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pH and Enzyme Activity
pH and Enzyme Activity
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Catalyzed vs Uncatalyzed
Catalyzed vs Uncatalyzed
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Pepsin Function
Pepsin Function
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Study Notes
Enzymes in Reactions
- As a reaction progresses from substrate (S) to product (P), the system's Gibbs free energy (ΔG) changes.
- Old bonds break (requires energy), and new bonds form (releasing energy); S and P exist at different energy levels.
- The ground state signifies the energy level of resting S and P
- An activation energy (Ea) barrier (ΔG‡) must be overcome for the reaction to occur.
- The transition state (‡) represents the activated form of molecules at the peak of the 'E hill', where decay back to S or progression to P is equally likely.
- A higher Ea results in a slower reaction rate.
- Enzymatic reactions involve intermediates like ES (enzyme-substrate complex) and EP (enzyme-product complex), leading to more P.
- Lowering Ea accelerates the reaction rate (ROR↑).
- Intermediates introduced are ES and EP
- Decreasing the activation energy (ΔG‡cat) occurs in the presence of a catalyst.
- Gibbs free energy is important and can be calculated: ΔG = ΔH - TΔS (difference between systems) or G = H - TS, where ΔH is enthalpy, T is temperature, and ΔS is entropy.
- Enzymes influence the rate of reaction (ROR) but not the equilibrium; they speed up S to P conversion.
- A simple reaction can be written as E + S ⇌ ES ⇌ EP ⇌ E + P
- Enzymes themselves are not consumed in the reaction and act as catalysts.
Enzyme Activity
- Enzyme activity is affected by pH.
- If the pH deviates from the optimal range, amino acid side chains can become incorrectly ionized, leading to a loss of function.
- Pepsin, found in the stomach, is an endopeptidase that hydrolyzes peptide bonds.
- G6P (glucose-6-phosphatase) in the liver hydrolyzes glucose-6-phosphate to produce glucose + free phosphate.
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