Chpt 5 BCHM 1/2 MC only

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Which type of protein function involves altering the chemical configuration or composition of a bound molecule?

Protein acting as a reaction catalyst

Which of the following is true about ligands?

Ligands are molecules that bind reversibly to proteins

Protein-ligand interactions are specific because...

Proteins have separate binding sites for different ligands

What is the role of conformational changes in proteins?

Conformational changes maintain the high degree of order in a living system

How do proteins interact with ligands?

Proteins interact with ligands through reversible binding

What is the significance of protein-ligand interactions in maintaining order in a living system?

Protein-ligand interactions allow for specific molecular interactions

What is the range of conformational changes in proteins?

Conformational changes in proteins can be subtle or dramatic

Which of the following best describes the principle of induced fit?

The binding of a protein and a ligand leads to a conformational change in the protein

Which of the following is true about multisubunit proteins?

A conformational change in one subunit can affect the conformation of other subunits

What is the term used to describe the reversible binding of other molecules by a protein?

Ligand

What are the coordination bonds of iron in a heme prosthetic group?

Four to nitrogen atoms in the flat porphyrin ring and two perpendicular to the porphyrin

What is the role of myoglobin in the body?

Facilitates O2 diffusion in muscle tissue

How can protein-ligand interactions be described quantitatively?

By a simple equilibrium expression

What does the association constant (Ka) measure?

The affinity of the ligand for the protein

Which state of hemoglobin has a higher affinity for oxygen?

R state

What triggers a conformational change from the T state to the R state in hemoglobin?

Binding of oxygen

What type of binding curve does hemoglobin exhibit for oxygen?

Sigmoidal

What is the purpose of hemoglobin binding oxygen cooperatively?

To bind oxygen efficiently in the tissues

What is the Hill coefficient in the Hill equation used for?

To measure the cooperativity of binding

What does a Hill coefficient greater than 1 indicate in a Hill plot?

Positive cooperativity

What type of modulator is carbon monoxide for hemoglobin?

Inhibitor

What is the purpose of ion pairs in stabilizing the T state of hemoglobin?

To enhance oxygen binding

What is the effect of oxygen binding on the conformation of hemoglobin?

All of the above

Which of the following correctly defines the dissociation constant (Kd)?

The reciprocal of the equilibrium constant for the release of ligand

Which of the following statements about the binding affinity of a ligand is true?

Lower Kd indicates higher affinity

What is the value of Kd when 50% of the ligand-binding sites are occupied?

Kd/2

Which of the following correctly describes the effect of protein structure on ligand binding?

Protein structure affects the binding affinity of ligands

What is the primary reason for carbon monoxide (CO) binding more strongly to free heme than oxygen (O2)?

Differences in the orbital structures

What is the role of the distal histidine (His) in myoglobin?

It stabilizes the Fe-O2 polar complex

Which of the following best describes the quaternary structure of hemoglobin?

Strong interactions between unlike subunits

Which of the following statements is true about the dissociation constant (Kd)?

Kd is the ligand concentration at which half of the receptor binding sites are occupied

What is the relationship between Kd and affinity?

Higher Kd indicates lower affinity

What is the role of Myoglobin's distal His in increasing heme's affinity for O2?

It stabilizes the Fe-O2 polar complex

What is the main function of erythrocytes (red blood cells)?

To transport O2

How many subunits does adult hemoglobin have?

4

What type of interaction is responsible for the quaternary structure of hemoglobin?

Salt bridges

What is the term for the structural adaptation that occurs between a protein and a ligand?

Induced fit

This quiz tests your knowledge about the dissociation constant (Kd) and its relationship with ligand affinity. Explore concepts like the equilibrium constant and ligand binding sites occupancy.

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