Cell Biology: Chromatin and Cell Cycle Overview
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Questions and Answers

What are the three primary components of chromatin?

  • DNA, RNA, and peptidoglycan
  • DNA, carbohydrates, and histone proteins
  • Histone proteins, RNA, and lipids
  • DNA, histone proteins, and RNA (correct)
  • Which step occurs during the S phase of the cell cycle?

  • DNA replicates and unwinds from nucleosomes (correct)
  • DNA synthesizes proteins
  • DNA repairs its strands
  • Centrosomes duplicate
  • What is the main function of helicase during DNA replication?

  • To prime DNA synthesis
  • To relieve stress on DNA
  • To untwist the double helix and expose strands (correct)
  • To connect Okazaki fragments
  • What occurs at the G1 checkpoint in the cell cycle?

    <p>Decision to enter G0 phase if conditions are unfavorable (B)</p> Signup and view all the answers

    During which phase do chromatids condense to become visible chromosomes?

    <p>Prophase (A)</p> Signup and view all the answers

    What is the total number of chromosomes in a human cell?

    <p>23 pairs or 46 total (D)</p> Signup and view all the answers

    What is the role of DNA ligase in DNA replication?

    <p>To connect adjacent DNA fragments via ligation (D)</p> Signup and view all the answers

    What happens during the late phase of prophase?

    <p>Nuclear envelope fragments disappear (B)</p> Signup and view all the answers

    What is the primary role of separase during cell division?

    <p>To cleave sister chromatids at the centromere. (C)</p> Signup and view all the answers

    Which of the following statements correctly describes telophase?

    <p>Nuclear envelope reforms and chromosomes de-condense. (A)</p> Signup and view all the answers

    What is a function of mRNA?

    <p>Carries genetic information from DNA to ribosomes. (D)</p> Signup and view all the answers

    Which process occurs first during transcription?

    <p>Initiation. (A)</p> Signup and view all the answers

    What is the role of transcription factors in gene expression?

    <p>They bind to the promoter region to promote loosening of histones. (A)</p> Signup and view all the answers

    During translation elongation, where do new tRNA molecules bind?

    <p>A site of the ribosome. (C)</p> Signup and view all the answers

    What modifications are made to pre-mRNA during processing?

    <p>5' cap and 3' polyA tail are added, introns are spliced out. (B)</p> Signup and view all the answers

    Which region of DNA is NOT typically involved in transcription initiation?

    <p>Centromere. (C)</p> Signup and view all the answers

    What is a polyribosome and its function?

    <p>Multiple ribosomes translating a single mRNA strand to produce many polypeptides. (D)</p> Signup and view all the answers

    Which type of RNA serves as a structural component of ribosomes?

    <p>rRNA. (A)</p> Signup and view all the answers

    Flashcards

    What is chromatin?

    Thread-like structures composed of DNA, histone proteins, and RNA. It's the form DNA takes in the nucleus of eukaryotic cells, except during cell division.

    How is chromatin formed?

    DNA winds around histone proteins to form nucleosomes. Multiple nucleosomes interact in a 'beads on a string' arrangement.

    Explain the transition from chromatin to chromosomes

    Chromatin condenses and intertwines, forming structures called chromosomes. This tightly packaged form is essential for cell division, as it ensures equal distribution of genetic material to daughter cells.

    What are metaphase chromosomes?

    The most condensed form of chromosomes, characterized by their tightly packed structure. This condensation prevents transcription, as the DNA is inaccessible to the cellular machinery involved in gene expression.

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    What is the cell cycle?

    The process of cell division that produces two genetically identical daughter cells. It is divided into two main phases: mitosis and cytokinesis.

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    What is interphase?

    The first phase of the cell cycle, where the cell grows and prepares for DNA replication. It encompasses G1, S, and G2 phases.

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    What happens in the G1 phase of interphase?

    The phase where the cell grows, carries out metabolic activities, and duplicates organelles and centrosomes. It acts as a checkpoint before proceeding to DNA synthesis.

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    What happens in the S phase of interphase?

    The phase where DNA replication takes place through the action of a complex molecular machinery known as the replisome. The DNA strands unwind from nucleosomes to allow for replication.

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    Anaphase

    Sister chromatids separate and move to opposite poles of the cell, becoming individual chromosomes.

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    Cytokinesis

    The process where a cell divides into two daughter cells, including the division of the cytoplasm, following nuclear division.

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    G2 Checkpoint

    The checkpoint that ensures all DNA is replicated and that the cell is ready for mitosis.

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    Cyclins

    A group of proteins that regulate the cell cycle. They activate kinases, leading to cell division.

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    Kinase

    An enzyme that adds a phosphate group to a protein, helping to activate it.

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    Replication Fork

    A complex of proteins involved in DNA replication that ensures both strands of DNA are copied before cell division.

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    Centromere

    The region on a chromosome where the two sister chromatids are attached.

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    Transcription Factor

    A protein that binds to DNA and helps control gene expression.

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    tRNA (Transfer RNA)

    A small RNA molecule that translates the genetic code from mRNA into a polypeptide.

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    RNA Polymerase

    An enzyme that uses a DNA template to create a strand of RNA. It's important for transcription.

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    Study Notes

    Chromatin Structure and Chromosome Formation

    • Chromatin is a thread-like structure composed of DNA (30%), histone proteins (60%), and RNA (10%).
    • Chromatin is found in nucleosomes.
    • During cell division, chromatin condenses into bar-like chromosomes.
    • DNA winds around histone molecules, forming nucleosomes.
    • Nucleosomes interact to form chromatin, similar to "beads on a string".
    • Chromatin condenses and intertwines to become a chromosome.
    • A metaphase chromosome is highly condensed, making transcription impossible due to the tight structure.

    Chromosome Number and Genes

    • Humans have 23 pairs (46 total) of chromosomes.
    • The 23rd pair determines sex (XX or XY).
    • Chromosomes are not equal in gene content. Some, like chromosome 1, carry more genes than others.
    • Approximately 32,000 genes code for a large number of different proteins.

    Cell Cycle Overview

    • The cell cycle includes interphase and mitosis/cytokinesis.
    • Interphase is divided into G1, S, and G2 phases.

    Interphase Details

    • G1 (Gap 1): Metabolic activity and growth. Organelles, centrosomes, and DNA are duplicated. A G1 checkpoint assesses if the cell can proceed. Failure results in G0 (permanent cell cycle exit).
    • S (Synthesis): DNA replication occurs via the replisome, an enzyme complex.
      • DNA's double helix unwinds using helicase.
      • Topoisomerases relieve tension in the DNA.
      • DNA polymerase III adds complementary nucleotides to the separated strands in a 5' to 3' direction, creating a copy of the DNA.
      • RNA primase makes RNA primers that allow the start of DNA replication by DNA polymerase III.
      • DNA polymerase I replaces RNA primers w DNA.
      • DNA ligase connects the DNA fragments.
    • G2 (Gap 2): Final preparations for division; another checkpoint.

    Mitotic Phase

    • Prophase (early): Chromatin condenses into visible chromosomes. Centrosomes divide and move to opposite poles. Mitotic spindles and asters form.
    • Prophase (late): Nuclear envelope fragments. Kinetochore microtubules attach to the centromeres of chromosomes, and chromosomes begin to move to the cell center.
    • Metaphase: Chromosomes align at the metaphase plate (center of the cell). Centrosomes are positioned at opposite poles.
    • Anaphase: Sister chromatids separate and move to opposite poles.
    • Telophase + Cytokinesis: Nuclear envelopes reform. Chromosomes decondense. Nucleoli reform. Cytokinesis (division of cytoplasm) occurs, forming two daughter cells.

    Cell Cycle Regulators

    • Internal regulators: Surface/volume ratio, proteins like cyclins and CDKs (cyclin-dependent kinases), G1 and G2 checkpoints.
    • External regulators: Growth factors (GFs), hormones, contact inhibition (cells stop dividing when they touch).

    DNA to Protein

    • DNA undergoes transcription to produce mRNA.
    • mRNA undergoes processing to become mature mRNA.
    • mRNA is translated by ribosomes to synthesize proteins.
    • Proteins are further processed and modified.
    • This process occurs in the nucleus (transcription) and cytoplasm (translation).

    Types of RNA

    • mRNA (messenger RNA): Carries the genetic code from the DNA to the ribosomes.
    • tRNA (transfer RNA): Carries amino acids to the ribosomes, aligning with mRNA codons.
    • rRNA (ribosomal RNA): Structural component of ribosomes.

    Transcription Factors

    • Transcription factors bind to the promoter region of DNA to facilitate unwinding of histones, allowing RNA polymerase to access the promoter.

    RNA Polymerase II

    • RNA polymerase II uses ribonucleoside triphosphates (NTPs) as substrates to synthesize pre-mRNA.

    Transcription Steps

    • Initiation: Requires factors that promote unwinding like HAT (histone acetyltransferase) and chromatin remodeling complexes.
    • Elongation: RNA polymerase synthesizes a pre-mRNA copy of the DNA.
    • Termination: Transcription process ends.

    Important DNA Regions

    • Enhancer: A region of DNA, upstream or downstream of the gene, that can influence transcription when bound by transcription factors (it can bend).
    • Promoter: A region of DNA close to the gene, crucial for transcription initiation.
    • Coding Strand: The DNA strand whose sequence is similar to the mRNA (except for T = U).
    • Template Strand: The DNA strand that is transcribed into mRNA.

    Sigma Factor

    • Sigma factor promotes specificity, increasing the accuracy of RNA polymerase binding & selection for the appropriate gene/region.

    Transcription Modification

    • mRNA undergoes modifications like a 5' cap, a 3' poly-A tail, and splicing (removing introns) to become mature mRNA.

    Translation

    • Initiation: Small ribosomal subunit finds the START codon (AUG) on mRNA. Methionine (fMet) tRNA binds. Large ribosomal subunit joins.
    • Elongation: New tRNA brings amino acids to the A site of the ribosome. Peptide bonds form. Ribosome moves along mRNA.
    • Termination: STOP codons (UAA, UAG, UGA) signal the end of the protein.

    Protein Synthesis in RER (Endoplasmic Reticulum)

    • mRNA-ribosome complex goes to ER via signal sequence and SRP (signal recognition particle).
    • SRP detaches. Polypeptide chain enters ER membrane pore.
    • Signal sequence is removed, and sugars are added.
    • Completed protein folds.
    • Protein is transported in a vesicle to the Golgi for further processing.

    Genetic Code

    • The genetic code dictates how mRNA sequences translate to amino acid sequences to form a protein.
    • START codon (AUG) and STOP codons (UAA, UAG, UGA) specify protein synthesis initiation and termination.

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    Description

    This quiz delves into the structure of chromatin and the formation of chromosomes, including their composition and organization during cell division. Additionally, it covers the fundamental aspects of the cell cycle, highlighting the phases of interphase. Test your knowledge on these essential biological concepts!

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