BSA Concentration Determination Quiz

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39 Questions

What is the formula to calculate dilution factor (DF)?

Dilution factor = Initial concentration / Final concentration

What is the wavelength of maximum absorption of the Coomassie Brilliant Blue G-250 dye when it is not yet bound to protein?

1 < pH < 2

How is the Coomassie Brilliant Blue G-250 dye affected by different pH levels?

At pH > 2, the dye has – charge and turns blue

What happens to the protein's conformation upon initial contact with CBB G-250 dye?

The protein's hydrophobic regions are exposed

How is the Bradford reagent prepared?

With methanol (or ethanol) and glacial acetic acid

What does the UV-visible spectrophotometer measure?

Absorbance or transmittance of light in the ultraviolet and visible range

At which wavelength does the protein-bound dye absorb orange light strongly?

595 nm

What is the Beer-Lambert law's relationship between absorbance and concentration?

Absorbance is directly proportional to concentration

What happens if the absorbance of a sample is higher than the absorbance of the standard solution with the highest concentration?

Another standard solution with a higher concentration should be prepared

Why should absorbance be measured immediately after mixing the dye with the protein sample?

To prevent the formation of unwanted precipitates

What does the correlation coefficient (R or r) measure?

The strength and direction of the linear relationship between two variables

What does the coefficient of determination (R2 or r2) quantify?

The proportion of variance in the dependent variable explained by the independent variable

What color does the reaction produce in the Biuret Assay?

Faint blue to purple

In which wavelength is the absorbance measured in Colorimetric copper-based assays?

280 nm

What does the Lowry Assay primarily measure in protein samples?

The protein concentration in a sample

What is the color produced by the Lowry Assay?

Intense blue color measured at 750 nm

Which protein quantitation technique can detect lower protein concentrations than the Biuret assay?

BCA Assay

What does the Folin-phenol reagent do in the Lowry Assay?

Binds to the peptide-copper complex, producing an intense blue color

How is homology modeling related to the Lowry Assay?

It predicts the unknown three-dimensional structure of a protein

What is the function of the Lowry Assay?

To measure protein concentration based on color intensity

What is the best protein to use as a standard in a protein assay?

Purified preparation of the protein being assayed

Why are the standard curves made using the same concentrations of 2 different proteins not the same?

Because BSA and BGG have different color sources

Where should the Bradford reagent be stored?

In a cool, dark place

Why should the incubation of protein solutions after mixing with the Bradford reagent be done away from light?

To ensure accurate color development

In the absence of an absolute reference protein, what should be used as a relative standard in a protein assay?

The protein being assayed

What is the purpose of using a protein standard like Bovine serum albumin (BSA) in the Lowry assay?

To compare the absorbance of the protein sample with a known standard

In the given data, what is the relationship between the protein standard's concentration (ug/uL) and its absorbance?

The absorbance increases as the concentration increases

What is the formula used to calculate the concentration (x) of a protein sample based on its absorbance (y) in the Lowry assay?

$x = \frac{y + 0.0007}{0.2869}$

Why are protein samples concentrations unknown in the Lowry assay?

To allow for comparison with a known protein standard

What is the significance of the equation y = 0.2869x – 0.0007 in the context of the Lowry assay?

It represents the relationship between absorbance and concentration for a specific protein standard

What is the result of converting 2 mg/mL to ug/uL?

1000 ug/uL

What is the result of converting 2 mg/mL to ug/mL?

2000 ug/mL

What volume of BSA stock solution is needed to prepare 500 uL of 2 ug/uL BSA solution, if the BSA stock solution has a concentration of 10 ug/uL?

50 uL

What does the formula C1V1=C2V2 represent?

Dilution formula

What is the final volume for a new BSA concentration if 2 ug/uL BSA solution is prepared using 100 uL of BSA stock solution with a concentration of 20 ug/uL?

200 uL

What happens to the protein's conformation upon initial contact with Coomassie Brilliant Blue G-250 dye?

It undergoes partial unfolding

What is the wavelength of maximum absorption of Coomassie Brilliant Blue G-250 dye when it is not yet bound to protein?

$300-400$ nm

"Coomassie Blue" stains proteins by binding to which amino acid residues?

[Arginine and lysine]

What is the formula to calculate dilution factor (DF)?

DF = Vf / Vi

Study Notes

Protein Quantitation and Assays

  • The formula to calculate dilution factor (DF) is not specified in the text.
  • The wavelength of maximum absorption of the Coomassie Brilliant Blue G-250 dye when it is not yet bound to protein is 465 nm.
  • The Coomassie Brilliant Blue G-250 dye is affected by different pH levels, with varying absorption spectra.
  • Upon initial contact with CBB G-250 dye, the protein's conformation changes, allowing the dye to bind.
  • The Bradford reagent is prepared by mixing the Coomassie Brilliant Blue G-250 dye with other reagents.
  • The UV-visible spectrophotometer measures the absorbance of a sample at a specific wavelength.
  • The protein-bound dye absorbs orange light strongly at a wavelength of 595 nm.
  • The Beer-Lambert law states that there is a linear relationship between absorbance and concentration.
  • If the absorbance of a sample is higher than the absorbance of the standard solution with the highest concentration, the sample may be too concentrated.
  • Absorbance should be measured immediately after mixing the dye with the protein sample to avoid errors.
  • The correlation coefficient (R or r) measures the strength of the linear relationship between variables.
  • The coefficient of determination (R2 or r2) quantifies the proportion of the variance in the dependent variable that is predictable from the independent variable.
  • The Biuret Assay produces a purple color.
  • In Colorimetric copper-based assays, the absorbance is measured at a wavelength of 540 nm.
  • The Lowry Assay primarily measures the protein content in protein samples.
  • The Lowry Assay produces a blue color.
  • The Lowry Assay can detect lower protein concentrations than the Biuret assay.
  • The Folin-phenol reagent reacts with the copper ions in the Lowry Assay to form a chromophore.
  • Homology modeling is not directly related to the Lowry Assay.
  • The function of the Lowry Assay is to quantify protein concentrations in a sample.
  • The best protein to use as a standard in a protein assay is a protein with a known concentration.
  • Standard curves made using the same concentrations of 2 different proteins are not the same due to differences in protein structure and composition.
  • The Bradford reagent should be stored in a dark place to avoid degradation.
  • The incubation of protein solutions after mixing with the Bradford reagent should be done away from light to prevent photobleaching.
  • In the absence of an absolute reference protein, a relative standard should be used in a protein assay.
  • The purpose of using a protein standard like Bovine serum albumin (BSA) in the Lowry assay is to create a standard curve.
  • The formula used to calculate the concentration (x) of a protein sample based on its absorbance (y) in the Lowry assay is y = 0.2869x – 0.0007.
  • Protein samples concentrations are unknown in the Lowry assay because the assay is used to quantify protein concentrations.
  • The equation y = 0.2869x – 0.0007 represents the linear relationship between absorbance and concentration in the Lowry assay.
  • 2 mg/mL is equivalent to 2 ug/uL.
  • 2 mg/mL is equivalent to 2000 ug/mL.
  • To prepare 500 uL of 2 ug/uL BSA solution, 100 uL of BSA stock solution with a concentration of 10 ug/uL is needed.
  • The formula C1V1=C2V2 represents the law of conservation of mass, used in dilution calculations.
  • The final volume for a new BSA concentration is 500 uL if 2 ug/uL BSA solution is prepared using 100 uL of BSA stock solution with a concentration of 20 ug/uL.
  • The protein's conformation changes upon initial contact with Coomassie Brilliant Blue G-250 dye.
  • Coomassie Blue stains proteins by binding to basic amino acid residues.
  • The formula to calculate dilution factor (DF) is not specified in the text.

Test your knowledge on determining Bovine Serum Albumin (BSA) concentrations using the Bradford assay. This quiz covers multiple solutions with different known concentrations and absorbance values.

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