The Basics of Brain Development PDF

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University of California, San Diego

2010

Joan Stiles & Terry L. Jernigan

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brain development neurobiology human development genetics

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This review article explores the stages and mechanisms of mammalian brain development. It highlights the crucial role of genes and environment in shaping brain structure and function, using data from diverse levels of neural organization. The article also emphasizes the intricate interplay of various processes in brain maturation.

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Neuropsychol Rev (2010) 20:327–348 DOI 10.1007/s11065-010-9148-4 REVIEW The Basics of Brain Development Joan Stiles & Terry L. Jernigan Received: 7 August 2010 / Accepted: 11 October 2010 / Published online: 3 November 2010 # The Author(s) 2010. This article is published with open access at Spri...

Neuropsychol Rev (2010) 20:327–348 DOI 10.1007/s11065-010-9148-4 REVIEW The Basics of Brain Development Joan Stiles & Terry L. Jernigan Received: 7 August 2010 / Accepted: 11 October 2010 / Published online: 3 November 2010 # The Author(s) 2010. This article is published with open access at Springerlink.com Abstract Over the past several decades, significant mediate them. This chapter is intended to provide an overview advances have been made in our understanding of the of some very basic principles of brain development, drawn basic stages and mechanisms of mammalian brain from contemporary developmental neurobiology, that development. Studies elucidating the neurobiology of may be of use to investigators from a wide range of brain development span the levels of neural organization disciplines. from the macroanatomic, to the cellular, to the molecular. Together this large body of work provides a picture of Keywords Brain development; maturation. Magnetic brain development as the product of a complex series of resonance imaging. Diffusion weighted imaging. Genetic dynamic and adaptive processes operating within a highly patterning of brain. Neurogenesis. Myelination. constrained, genetically organized but constantly chang- Effects of experience on connectivity ing context. The view of brain development that has emerged from the developmental neurobiology literature Acronym List presents both challenges and opportunities to psychologists CP cortical plate seeking to understand the fundamental processes that underlie CR Cajal-Retzius cells social and cognitive development, and the neural systems that CT corticothalamic pathway DTI diffusion tensor imaging E# embryonic day (number of days post This work was supported by grants to Joan Stiles from the National Institute of Child Health and Human Development: R01-HD25077, conception, e.g. E25) R01 HD060595, and to Terry Jernigan from the National Institute of FA fractional anisotrophy Drug Abuse: RC2DA029475 and the Lundbeck Foundation: R32- GW# gestational week (number of weeks post A3161. The authors would also like to acknowledge the support of the conception, e.g. GW8) UCSD Kavli Institute for Brain and Mind. M1 primary motor cortex J. Stiles : T. L. Jernigan MR magnetic resonance Department of Cognitive Science, Center for Human MRI magnetic resonance imaging Development, University of California, San Diego, CA, USA MZ marginal zone ODC ocular dominance columns T. L. Jernigan OPC oligiodendrocyte progenitor cells Departments of Psychiatry and Radiology, School of Medicine, PAC primary auditory cortex University of California, San Diego, CA, USA PVC primary visual cortex S1 somatosensory cortex T. L. Jernigan (*) SP subplate UCSD Center Human Development 0115, TC thalamocortical pathway 9500 Gilman Drive, La Jolla, CA 92093, USA V1 primary visual cortex e-mail: [email protected] VZ ventricular zone 328 Neuropsychol Rev (2010) 20:327–348 Human brain development is a protracted process that ogy of the prenatal neural system are underpinned by begins in the third gestational week (GW) with the changes occurring at the cellular level. Neuron production differentiation of the neural progenitor cells and extends in humans begins on embryonic day 42. E42, i.e. 42 days at least through late adolescence, arguably throughout the post conception (Bystron et al. 2008; Stiles 2008) and is lifespan. The processes that contribute to brain develop- largely complete by midgestation. As they are produced ment range from the molecular events of gene expression to neurons migrate to different brain areas where they begin to environmental input. Critically, these very different levels make connections with other neurons establishing rudimentary and kinds of processes interact to support the ongoing series of neural networks. By the end of the prenatal period major events that define brain development. Both gene expression fiber pathways, including the thalamocortical pathway, and environmental input are essential for normal brain are complete. development, and disruption of either can fundamentally alter Brain development continues for an extended period neural outcomes. But neither genes nor input is prescriptive or postnatally. The brain increases in size by four-fold during determinative of outcome. Rather brain development is aptly the preschool period, reaching approximately 90% of adult characterized as a complex series of dynamic and adaptive volume by age 6 (Reiss et al. 1996; Iwasaki et al. 1997; processes that operate throughout the course of development Courchesne et al. 2000; Kennedy and Dehay 2001; Paus et to promote the emergence and differentiation of new neural al. 2001; Kennedy et al. 2002; Lenroot and Giedd 2006). structures and functions. These processes operate within But structural changes in both the major gray and white highly constrained and genetically organized, but constantly matter compartments continue through childhood and changing contexts that, over time, support the emergence of adolescence, and these changes in structure parallel changes the complex and dynamic structure of the human brain in functional organization that are also reflected in (Waddington 1939; Morange 2001; Stiles 2008). behavior. During the early postnatal period, level of This paper will review some of the major events that connectivity throughout the developing brain far exceeds contribute to the development of the human brain from its that of adults (Innocenti and Price 2005). This exuberant early embryonic state through adolescence. It begins by connectivity is gradually pruned back via competitive examining the foundational changes that occur during the processes that are influenced by the experience of the embryonic period, which in humans extends through the organism. These early experience dependent processes eighth week post conception (gestational week eight, or underlie the well-documented plasticity and capacity for GW8). By the end of the embryonic period the rudimentary adaptation that is the hallmark of early brain development. structures of the brain and central nervous system are By way of background, this chapter begins with a established and the major compartments of the central and consideration of two important concepts that are essential peripheral nervous systems are defined (see Fig. 1). The for understanding how brains develop. The first involves ensuing period of fetal development extends through the gene expression: what genes are and how they play an end of gestation. During this time there is rapid growth and important role in brain development. The second is the elaboration of both cortical and subcortical structures, outcome of brain development, the mature brain: what are including the rudiments of the major fiber pathways the major structures and what are the basic principles of (Kostovic and Jovanov-Milosevic 2006); (Kostovic and brain organization. The chapter then considers some of Jovanov-Milosevic 2006). Changes in the gross morphol- the major milestones of brain development with the aim of illustrating the dynamic, interactive nature of brain development. Genes and Gene Products Genes are the material substance that is passed intergenerationally from parent to offspring. Genes are contained in the nucleotide sequences of DNA that are found in the nucleus of every cell in the body. The expression of a gene has one result: the production of a protein molecule. These molecular products of gene expression are essential for all aspects of development. Genes provide a template for making proteins and it is the Fig. 1 Human embryo at Carnegie Stage 23, the end of the embryonic proteins that are the active agents in biological development. period (GW8). It is 30 mm long. Image from the Kyoto Collection Thus, while genes contain information that is essential for the reproduced with permission of Prof Kohei Shiota, Graduate School of Medicine, Kyoto University, and obtained with permission of Dr. development and functioning of the biological organism, Mark Hill, University of New South Wales, http://embryology.med. genes are basically inert molecules. Genes cannot participate unsw.edu.au/embryo.htm directly in biological processes. They do not directly create Neuropsychol Rev (2010) 20:327–348 329 blue eyes, disease proclivity, intelligence or behavior. Rather, thoughts, sensations, feelings and actions. Since each there is an indirect relationship between the information in a neuron can make connections with more than 1,000 other gene and a developmental outcome. The information in the neurons, the adult brain is estimated to have more than 60 gene sequences must be extracted, recoded and translated into trillion neuronal connections. The point of connection proteins. It is the proteins that enter into the complex, between two neurons is called a synapse. interactive signaling cascades that usually involve many gene The mature human brain has a characteristic pattern of products as well as influences from the environment. A folds (the sulci) and ridges (the gyri). The enfolding of the particular gene product is thus one of many essential elements mature brain is thought to be an adaptation to the dramatic that interact to support and guide the complex process of brain growth in the size of the brain during the course of development. evolution. The folding of brain tissue allowed large brains to fit in comparatively small cranial vaults that had to The Organization of the Mature Brain The human brain is remain small to accommodate the birth process (see arguably the most complex of all biological systems. The Fig. 3a). The largest and most important brain information mature brain is composed of more than 100 billion neurons processing networks involve the neocortex and the subcortical (Pakkenberg and Gundersen 1997). Neurons are the nuclei that relay information to and from the neocortex. The information processing cells in the brain (see Fig. 2). There neocortex is a 2–5 mm thick layer of cells that lies on the are many different kinds of neurons that vary in their size surface of the brain (the word cortex comes from the Latin and shape as well as in their function. Neurons make term meaning bark, as in the bark of a tree). In the cross- connections with other neurons to form the information section of the brain shown in Fig. 3b the neocortex is the thin, processing networks that are responsible for all of our dark gray strip that follows the brain surface. The subcortical nuclei are clusters of neurons that serve as both signal relay centers communicating between the neocortex and the rest of the body, and as relays among different areas of the cortex. They are located deep in the brain below the cortex and are thus referred to as “subcortical” nuclei. Because both the neocortex and the subcortical nuclei contain the cell bodies of neurons they are gray in appearance, thus giving rise to the term “gray matter”. Populations of neurons are connected to one another by fibers that extend from cell bodies of the individual neurons. There are two kinds of connecting fibers, dendrites and axons (see Fig. 2). Dendrites are arrays of short fibers that look like the branches of a tree; collections of dendrites are often referred to as dendritic arbors. They extend only a short distance away from the neuron cell body. Their main Fig. 3 Two views of the human brain. a. Lateral view (rostral end is Fig. 2 Schematic drawing of a neuron. Each neuron a single large left, caudal is right) shows an apparently uniform surface marked by axon. At the distal tip of the axon is a growth cone that serves to guide gyri and sulcal folds (Right hemisphere of J. Piłsudski’s brain, lateral the axon to targeted brain regions. Once the axon reaches the target view, image in the public domain). b. Coronal cross-section (cut at site, synapses, or points of connection, form between the axon and the approximately the level of the dotted line in A) stained for cell bodies target neuron. The synapse allows electrochemical signals to be that mark neurons. The neocortex is the thin mantel layer (dark purple) transmitted to the target neuron. Each neuron also has a complex arbor on the surface of the brain. The white areas are connecting fiber of dendrites that receive information from other neurons. Image in the pathways. Image reproduced with permission from http://www.brains. public domain uploaded from: http://upload.wikimedia.org/wikipedia/ rad.msu.edu which is supported by the U.S. National Science commons/7/72/Neuron-figure-notext.svg. Original image from Nicolas Foundation. Images obtained with permission from Wiki Commons, Rougier http://commons.wikimedia.org/wiki 330 Neuropsychol Rev (2010) 20:327–348 function is to receive the electrochemical input signals from The First Step in Brain Development: Differentiation other neurons. Axons are long connecting fibers that extend of the Neural Progenitor Cells over long distances and make connections with other neurons, often at the dendrites. Axons act a little like At the end of the second week after conception, the embryo telephone wires in that they are responsible for sending is a simple, oval-shaped, two-layered structure. Figure 4a electrochemical signals to neurons located in distant provides an overview of the major spatial dimensions of the locations. Bundles of individual axons from many different embryo on embryonic day 13 (E13; note during the neurons within one region of the brain form fiber tracts that embryonic period age is often denoted by the number of extend to, and make connections with, groups of neurons in days after conception, which is referred to as the embryonic other regions of the brain forming the information process- day, thus gastrulation begins on embryonic day 13, or E13). ing networks. Axons are wrapped in a fatty substance called Figure 4b orients the embryo within the context of the myelin that, like insulation on a telephone wire, makes the embryonic placenta, and Fig. 4c shows how the embryonic transmission of electrochemical signals between regions spatial axes relate to the major spatial dimensions of the efficient. Myelin is white in appearance, thus fiber path- infant (see figure caption for details). ways of brain are often referred to as “white matter”, or Each of the two layers contains a different, very “white matter pathways”. primitive cell type (Fig. 5b). The upper layer contains At the very center of the brain are a series of epiblast cells and the lower layer contains hypoblast cells. interconnected cavities that form the ventricular system of By the end of the third week, the embryo is transformed the brain (see Fig. 2b). The ventricular system is filled with through a set of processes that are referred to collectively as a fluid called cerebral spinal fluid that is completely gastrulation into a three-layered structure. While this may recycled several times per day. The ventricular system has seem to be a simple change, the transformations of cell a number of important functions including cushioning and lines that occur during gastrulation set the stage for all protection of the brain, removal of waste material, and subsequent developments in the embryo. The epiblast cells transport of hormones and other substances (Brodal 2010). of the upper cell layer will differentiate into the three During brain development the walls of the ventricles are the primary stem cell lines that will eventually give rise to all of site of most neuron production. the structures in the developing embryo, while the Although the neocortex of the brain may appear to be hypoblast cells of the lower layer will form extraembryonic relatively uniform in structure (lateral view), it is actually tissues such as the fetal component of the placenta and the parcellated into structurally and functionally distinct areas. connecting stalk. Among the stem cell lines that emerge The areas differ in the kinds of neurons they contain, the during gastrulation are the neural stem cells. The neural kinds of input they receive, and in the types of connections stem cells are capable of producing all of the different cells they make with other brain areas. These structural that make up the brain and central nervous system, and for differences result in functional differences creating brain areas this reason the neural stem cells are usually called the that are specialized for carrying out different kinds of neural progenitor cells. processes. The first step in the process of gastrulation is signaled by the appearance of a slit-like opening in the upper layer of the embryo called the primitive streak (Fig. 5a). This Brain Development in the Embryonic and Early Fetal opening provides access to the lower regions of the embryo. Periods Next, a subset of the epiblast cells detach from the upper layer of the embryo and begin to migrate toward the This section considers some of the major foundational primitive streak. When they reach the opening they change changes that occur during the embryonic period and early direction and pass through the primitive streak and under fetal period. In humans the embryonic period begins at the upper layer (see Fig. 5b). They then change direction conception and extends through GW8. By the end of the again and begin moving toward the rostral end of the embryonic period the rudimentary structures of the brain embryo (see Fig. 5c). The rostral end of the embryo will and central nervous system are established and the major develop into the head of the baby. The earliest migrating compartments of the central and peripheral nervous systems cells will move to the most rostral positions in the embryo, are defined. The early fetal period, which extends to later migrating cells will move to successively more caudal approximately midgestation, is a critical period in the regions that will develop into the neck and trunk of the development of the neocortex. Most cortical neurons are body. The migrating cells will form two new embryonic generated by that time and many have migrated to their layers. The cells that form the deepest layer will displace positions in the neocortex and have begun to from essential the hypoblast cells and form the endodermal stem cell layer brain networks for information processing. which will give rise to structures of the gut and respiratory Neuropsychol Rev (2010) 20:327–348 331 A. Dorsal View of an E13 Embryo Rotated to Position in Placenta (in B): o o Rostral (head) Rotate 90 right Rotate 90 in depth Caudal (Tail) B. Cross-section: Placenta and Embryo C. Comparable Spatial Axes for an Infant Amniotic Sac Dorsal Surface of Embryo Rostral EMBRYO End of Embryo Yolk Sac Fig. 4 The major spatial dimensions of the E13 embryo. a. The dorsal context of the lateral view of the embryo and placenta shown in B, it is surface view of the embryo on E13 is shown in the first panel. The necessary to first rotate the embryo so that the rostral end faces right wall of the amniotic sac has been cut away to reveal the dorsal surface (second panel of A), and then rotate the embryo in depth so that the (epiblast layer) of the embryo. The rostral (“head”) end of the embryo dorsal surface faces up (last panel of A). C. The comparable rostral- is on the top of this figure, and the caudal (“tail”) end is at the bottom. caudal and dorsal-ventral spatial axes of an infant. The spatial axes of b. A lateral cross-section of the embryo and placenta at E13. On E13, a crawling infant are comparable to the position of the embryo in B. the two-layered embryo is located centrally between two major Illustrations by Matthew Stiles Davis reprinted by permission of the placental sacs. The amniotic sac (which later in development will publisher from THE FUNDAMENTALS OF BRAIN DEVELOP- surround the embryo) is located above the embryo, and the yolk sac is MENT: INTEGRATING NATURE AND NURTURE by Joan Stiles, located below. The rostral end of the embryo is to the right in this Cambridge, Mass.: Harvard University Press, Copyright © 2008 by figure. To place the embryo shown in the first panel of A within the the President and Fellows of Harvard College A B C D Fig. 5 The major events of gastulation occur between E13 and E20. (blue arrows). The first cells to migrate form the most rostral regions a. The onset of gastrulation is marked by the formation of the of the newly forming endodermal and mesodermal layers. Later primitive streak and the primitive node. The primitive streak provides migrating cells form progressively more caudal regions of the layers. an opening to deeper embryonic layers. The primitive node is a critical d. Cells that migrate along the axial midline send molecular signals molecular signaling center. On E13, cells from the epiblast layer begin that induce cells in the overlying epiblast layer to differentiate into to migrate toward the primitive node and streak (blue arrows). The neuroectodermal cells (red band) which are the neural progenitor cells. dotted line indicates the cross-sectional view shown in panel B. b. The Migrating cells also receive a second set of signals from the node that migrating cells first move to the primitive streak and then change induce anterior or posterior fate in different subpopulations of the direction and move down and under the upper layer (blue arrows). As neurectodermal cells. Early migrating cells signal anterior fate in the the cells pass the node they receive molecular signals that induce gene progenitor cells, while late migrating cells signal posterior fate. expression in the migrating cells. By the end of gastrulation, the Illustrations by Matthew Stiles Davis reprinted by permission of the hypoblast layer is replaced by the newly formed endodermal layer and publisher from THE FUNDAMENTALS OF BRAIN DEVELOP- the epiblast layer by the ectodermal layer. Between these layers the MENT: INTEGRATING NATURE AND NURTURE by Joan Stiles, mesodermal layer forms. c. Once under the upper layer, the cells Cambridge, Mass.: Harvard University Press, Copyright © 2008 by change direction and begin migrating rostrally under the upper layer the President and Fellows of Harvard College 332 Neuropsychol Rev (2010) 20:327–348 tract, while the cells that form the new intermediate ing epidermal cells move to the most rostral end of the mesodermal stem cell layer will give rise to structures such embryo and later migrating cells move to successively more as muscle, bone, cartilage and the vascular system. Cells caudal locations. The primitive node signals all migrating that remain in the epidermal layer are transformed into one cells to produce the proteins that signal neural progenitor of two types of ectodermal layer stem cells. Epidermal fate, but each successive wave of migrating cells also ectodermal stem cells will give rise to structures such as receives a second signal that specifies a regional identity for skin, nails, and sweat glands, while neurectodermal stem the neural progenitors. Thus, primitive node signals early cells will give rise to the brain and central nervous system. migrating epidermal cells to produce molecular signals for The neuroectodermal stem cells are the neural progenitor the cells in the overlying layer to differentiate into neural cells. progenitors capable of producing cells appropriate for Differentiation of all of the embryonic stem cell lines forebrain structures, while later migrating cells signal involves complex cascades of molecular signaling. Only the differentiation of neural progenitors capable of producing differentiation of the neural stem cells (neural progenitors) cells appropriate for hindbrain or spinal cord structures. will be considered here. At the beginning of gastrulation the epiblast layer cells that will differentiate into neural The Formation of the Neural Tube: The First Brain progenitor cells are located along the rostral-caudal midline Structure of the two-layered embryo (indicated in red in Fig. 5d). The differentiation of these cells into neural progenitor cells is The next major step in brain development involves the the result of complex molecular signaling that involves formation of the first well-defined neural structure, the multiple gene products (i.e., proteins) that are produced by neural tube. The neural tube forms during the third week of several different populations of embryonic cells. Recall that gestation, between E20-27. As discussed in the last section, at the beginning of gastrulation, epiblast cells begin to by the end of gastrulation the neural progenitor cells have migrate toward and then through the primitive streak. As differentiated and are positioned along the rostral-caudal the subset of cells that migrate along the rostral-caudal midline of the upper layer of the three-layered embryo. The midline of the embryo approach the opening they pass region of the embryo containing the neural progenitor cells another structure called the primitive node that is located at is referred to as the neural plate. The first sign of neural the rostral end of the primitive streak (see Fig. 5a, b, c and tube development is the appearance of two ridges that form d). The primitive node is a molecular signaling center. Cells along the two sides of the neural plate on approximately of the primitive node send a molecular signal to the subset E21 (Fig. 6a). The neural progenitor cells lie between the of cells that migrate along the rostral-caudal midline of the two ridges. Over the course of several days, the ridges rise, embryo and that signal, in turn, triggers gene expression in fold inward and fuse to form a hollow tube (Copp et al. the migrating cells. The gene expression in the migrating 2003). Fusion begins in the center of the developing neural cell produces a protein that is secreted into the space tube and then proceeds in both the rostral and caudal between the migrating cells and the cells that remain in the directions (Fig. 6b and c). The anterior neuropore at the midline region of the upper epiblast layer. The secreted most rostral end of the neural tube and the posterior protein binds to receptors on the surface of cells in the neuropore at the caudal end, are the last segments to close, upper layer of the embryo and induces the epiblast cells to on E25 and E27, respectively (Fig. 6d). When the neural differentiate into the neural progenitor cells. tube is complete, the neural progenitors form a single layer Thus, at the end of gastrulation the cells located along of cells that lines the center of the neural tube immediately the midline of the upper layer of the embryo have adjacent to its hollow center. In the embryo, the hollow transformed into neural progenitor cells (central red center of the neural tube is cylindrical, like the center of a rectangle in Fig. 5d). The differentiation of neural progen- straw. But as the brain becomes larger and more complex, itor cells requires complex genetic signaling among at least the shape of the hollow cavity also changes, eventually three cell populations: the cells of the node, the migrating forming the ventricular system of the brain. Because the cells and the cells that will become the neural progenitors. neural progenitors are located in the region that will However, this early signaling is even more complex. In become the ventricles, the region is called the “ventricular addition to providing the molecular signals that induce the zone” (VZ). The neural progenitor cells in the most rostral migrating cells to produce proteins that will transform the region of the neural tube will give rise to the brain, while overlying epidermal cells into neural progenitor cells, the more caudally positioned cells will give rise to the primitive node generates a second set of signals that hindbrain and spinal column. changes over the course of gastrulation and serves to Although the basic three-dimensional organization of the establish the basic rostral-caudal organization of the embryo is evident with the formation of the neural tube, embryonic nervous system. Recall that the earliest migrat- over the next month, the embryo undergoes rapid growth. Neuropsychol Rev (2010) 20:327–348 333 A B C D E F E28 E49 Fig. 6 Changes in the morphology of the embryo in the embryonic evident by E28. These include the Prosencephalon, Mesencephalon, period. The formation of the neural tube occurs between E19 and E29. and Rhombencephalon. f. By E49 the secondary vesicles emerge. The a. The emergence of the neural ridges is observed on E19. b. The Prosencephalon differentiates into the Telencephalon and Diencephalon, ridges fold over to begin the process of neural tube formation. c. and the Rhombencephalon into the Metencephalon and Myelencephalon. Closure of the neural tube begins on E22 in central regions of the Illustrations by Matthew Stiles Davis reprinted by permission of the newly forming neural tube. d. Closure continues in rostral and caudal publisher from THE FUNDAMENTALS OF BRAIN DEVELOPMENT: direction. The anterior neuropore closes on E25, and the posterior on INTEGRATING NATURE AND NURTURE by Joan Stiles, Cambridge, E27. e. Following the closure of the neural tube, the embryo begins to Mass.: Harvard University Press, Copyright © 2008 by the President and expand particularly in anterior regions. The primary vesicles are Fellows of Harvard College At the end of neurulation the embryo is 3 to 5 mm long, “metencephalon” and “myelencephalon”. The mesenceph- and by the end of the GW8 it grows to 27 to 31 mm, a alon does not further divide. These five subdivisions are tenfold increase. During this period the shape of the aligned along the rostral-caudal axis of the embryo and primitive nervous system changes dramatically. Just before establish the primary organization of the central nervous neural tube closure, the anterior end of the tube begins to system (Stiles 2008). expand forming the three primary brain vesicles, or pouches (Fig. 6e). The most anterior of these embryonic Neural Patterning in the Embryonic Period brain vesicles is called the “prosencephalon” which is the embryonic precursor of the forebrain. The middle vesicle is The transformations in the overall shape of the embryo the “mesencephalon” which is the precursor of midbrain reflect more specific change in neural patterning within all structures, and the most posterior is the “rhombencephalon” regions of the embryonic nervous system. These changes which will become the hindbrain. These three segments mark the beginning of a protracted process of neural further subdivide and by the end of the embryonic period patterning within the central nervous system that begins in the five secondary brain vesicles are present (Fig. 6f). The the embryonic period and extends for many years. The prosencephalon divides into the “telencephalon” and the changes are gradual and follow an ongoing course of “diencephalon”, and the rhombencephalon divides into the continuous specification and refinement (Sur and Rubenstein 334 Neuropsychol Rev (2010) 20:327–348 2005). The patterning that emerges in the embryonic period areas shrink (Fig. 7c). Thus it is the effect of the particular provides only a primitive map of eventual nervous system level of one molecular signal in combination with the organization, but it sets the stage for later developments. particular level of another signal that produces the classical Embryonic patterning affects all brain regions from the pattern of sensorimotor organization in the developing forebrain through the spinal column, such that by the end of cortex. Since these original reports of the role of Pax6 and the embryonic period in GW8 primitive patterning of Emx2 signaling in neocortical patterning, it has become clear sensorimotor regions within the neocortex is established that the interactions are more complex. At least two (Bishop et al. 2002), major compartments within diencephalic additional molecules have been identified, Coup-TF1 and and midbrain regions have differentiated (Nakamura et al. SP8. Both are produced in gradients. Coup-TF1 is expressed 2005; Kiecker and Lumsden 2004), and the segmental in greatest concentration in caudal-lateral regions, while SP8 organization of the hindbrain and spinal column have been is expressed in rostral-medial regions. As was the case with specified (Lumsden and Keynes 1989; Gavalas et al. 2003). Pax6 and Emx2, blocking the expression of these genes Space does not permit an extended discussion of embryonic results in dramatic alteration in the sensorimotor organization neural patterning. Rather, one example, focused on very early of the neocortex (O’Leary et al. 2007; Zembrzycki et al. patterning within the developing neocortex, will serve both to 2007; O’Leary and Sahara 2008; Sansom and Livesey 2009). define the construct of neural patterning, and to illustrate the These graded patterns of molecular signaling occur in idea of continuous specification and refinement of brain areas. regions of the neocortical proliferative zone that during The mature neocortex is partitioned into well-defined gastrulation had been specified as “anterior”. Thus this later structurally and functionally distinct “areas” that are patterning constitutes a regional elaboration or refinement differentiated by their cellular organization and patterns of of an earlier phase of neural patterning. As will be discussed neuronal connectivity. Initial patterning of neocortex into later, patterning within these regions is far from complete at cortical areas results from different molecular signals the end of the embryonic period. Fundamental organizational present in different regions of the neocortical proliferative features of the sensory and motor cortices will not arise until zone. Two signaling molecules, Emx2 and Pax6, play an the late fetal period. In addition, across the period of fetal and essential role in the early patterning of the presumptive early postnatal development the structural and functional neocortex. Emx2 and Pax6 are transcription factor proteins identity of these basic brain areas remains malleable and that are the molecular products of Emx2 and Pax6 gene subject to the effects of input and experience. expression.1 These two signaling molecules are produced in opposite gradients along the anterior-posterior extent of the neocortical proliferative zone (see Fig. 7a). The concentra- Brain Development in the Fetal Period tion of Emx2 is highest in posterior and medial regions, and lowest in anterior lateral regions; Pax6 has the opposite The fetal period of human development extends from the expression pattern. The interaction of these two gradients ninth gestational week through the end of gestation. The contributes to early patterning of the neocortex (Bishop et gross morphology of the developing brain undergoes al. 2002; Hamasaki et al. 2004). High concentrations of striking change during this time. The human brain begins Pax6 combined with low Emx2 induces progenitors to as a smooth, “lissencephalic” structure and gradually produce neurons appropriate for motor cortex (M1), while develops the characteristic mature pattern of gyral and the reverse concentrations induce production of neurons for sulcal folding. The formation of gyri and sulci follows an visual cortex (V1). At intermediate levels of both factors orderly sequence. Primary sulci are first seen as grooves somatosensory cortices (S1) emerge. positioned in specifically targeted brain regions, second- Studies of mutant mice, for which expression of either ary branches then begin to form off the primary sulci, Emx2 or Pax6 is blocked (thus altering the balance of followed later by the tertiary branches. The first fissure signals across the cortical proliferative zone), show systematic to form is the longitudinal fissure that separates two cerebral shifts in the organization of cortical areas (Bishop et al. 2000; hemispheres. Its development begins in rostral regions as Bishop et al. 2002). These studies confirm that it is the early as GW8 (Chi et al. 1977) and proceeds caudally until it interaction of the two signaling molecules that induces is complete at GW22. Other primary sulci form between change in the surrounding cell populations. When Emx2 GW14-26. These include: Sylvian, Cingulate, Parieto- expression is blocked, visual areas shrink and somatosensory Occipital and Calcarine (GW14-16); Central and Superior and motor areas enlarge (Fig. 7b); when Pax6 expression is Temporal (GW20-24); and Superior Frontal, Precentral, blocked, visual areas enlarge while somatosensory and motor Inferior Frontal, Postcentral, and Intraparietal (GW25-26). Secondary sulci emerge between GW30-35; formation of 1 Note that by convention gene names are italicized, and the name of tertiary sulci begins during GW36 and extends well into the proteins that are the products of gene expression are not. postnatal period. Neuropsychol Rev (2010) 20:327–348 335 Fig. 7 The effects of different concentrations of Emx2 and Pax6 on the development of sensorimotor cortical areas. It is the combination of the specific concentration of each molecule that determines the identity of the cortical region. Mutations that affect the quantities of either molecule alter cortical patterning. Adapted with permission from Bishop et al. (2002). "Distinct actions of Emx1, Emx2, and Pax6 in regulating the specification of areas in the developing neocortex."J Neurosci 22(17): 7627–7638, Fig. 1 The changes that occur in the gross anatomy of the fetal step in neuron production involves increasing the size of the brain reflect dramatic changes occurring at the cellular level. neural progenitor cell population. Neural progenitors are a Neuron production begins in the embryonic period on E42, mitotic population of cells, that is, they can divide to form new and extends through midgestation in most brain areas. cells. Neurons are post-mitotic cells; once formed they are no Regions of the brain that contain the cell bodies of neurons longer capable of dividing and producing new cells. From the are gray in appearance, hence the name. Different populations end of gastrulation through approximately E42 in humans, the of neurons form gray matter structures in many regions of the population of neural progenitor cells divides by what is brain including hindbrain and spinal column, cerebellum, described as a “symmetrical” mode of cell division. Symmetrical midbrain structures, deep subcortical nuclei and the neocortex. cell division produces two identical neural progenitor cells. Over Soon after they are produced, neurons migrate away from the multiple rounds of cell division between E25 and E42, proliferative regions of the VZ. The neurons that will form the symmetrical cell division provides the means for augmenting neocortex migrate in an orderly fashion forming the six- the size of the neural progenitor pool. layered neocortical mantel. Once positioned in cortex neurons Beginning on E42, the mode of cell division begins to begin to differentiate producing neurotransmitter and neuro- shift from symmetrical to asymmetrical. During asymmet- trophic factors, and extending the dendritic and axonal rical cell division, two different types of cells are produced. processes that form fiber pathways of the brain neural In neural progenitors, asymmetrical cell division produces networks. The major fiber pathways make up the brain white one neural progenitor and one neuron (Wodarz and Huttner matter. The efficiency of information transmission in the 2003). The new progenitor cell remains in the proliferative pathways is greatly enhanced by myelin which ensheaths the zone and continues to divide, while the postmitotic neuron axons. Myelin is a fatty substance that is white in appearance, leaves the proliferative zone to take its place in the hence the name white matter. Much of brain development in developing neocortex. The shift to asymmetrical cell the fetal period centers around the processes of neuron division among the progenitor population is gradual and production, migration and differentiation. The remainder of initially includes only a small proportion of progenitors, but this section will consider these processes in greater detail. those numbers increase dramatically by the end of cortical neurogenesis. In humans cortical neurogenesis is complete Neuron Production by approximately E108 (Clancy et al. 2001). The human brain contains billions of neurons most of Neuron Migration which are produced by mid-gestation (Bayer et al. 1993; Rakic 1995). The pool of neural progenitor cells that is Most neurons are produced in the VZ and migrate radially specified at the end of gastrulation is far too small to from the VZ in the center of the brain out to the developing accommodate neuron production on this scale. Thus, the first neocortex (see Fig. 8a and b). Very early in neocortical 336 Neuropsychol Rev (2010) 20:327–348 A Pial Surface B Pial Surface C Ventricular Zone Ventricular Zone Fig. 8 Different modes of neuronal migration to the neocortex. a. (2003). Neuronal Migration in the Developing Cerebral Cortex: Neuron migration by somal translocation where cell extends a Observations Based on Real- time Imaging. Cerebral Cortex, 13, cytoplasmic process and attaches to the outside of the brain 607–611. Figure 5. Figure C adapted from illustrations by Matthew compartment (pial surface), and then the nucleus moves up into the Stiles Davis reprinted by permission of the publisher from THE brain area. b. Neuron migraton radial glial guide. Radial glial provides FUNDAMENTALS OF BRAIN DEVELOPMENT: INTEGRATING scaffold for neuron to migrate along. c. Neuron migration from second NATURE AND NURTURE by Joan Stiles, Cambridge, Mass.: proliferative zone in ganglionic eminences by tangential migration Harvard University Press, Copyright © 2008 by the President and (arrows indicate direction of migration for different neuron popula- Fellows of Harvard College tions). Figures A and B adapted with permission from Nadarajah et al. development the distances the neuron must traverse are are actually the neural progenitor cells (Noctor et al. 2001; small. Thus the earliest produced neurons can use a mode Noctor et al. 2002; Parnavelas et al. 2002; Weissman et al. of migration referred to as somal translocation (Nadarajah 2003). and Parnavelas 2002). In somal translocation the neuron Very recent studies have identified a second proliferative extends a long basal process, which is an extension of the zone located in the region of the ventral telencephalon that cell’s body, just beyond the edge of the VZ into the outer will later develop into the basal ganglia (see Fig. 8c). region of the brain compartment (see Fig. 8a). The basal During embryonic and fetal development three compart- process attaches to the pial surface, which is the outer ments in this region, the medial, lateral and caudal surface of the developing brain (Miyata et al. 2001). The ganglionic eminences, are the source of an important class nucleus of the cell then moves through cytoplasm of the of inhibitory cortical interneurons (Anderson et al. 2001; basal process. As the nucleus moves up the process Corbin et al. 2001; Nery et al. 2002). Unlike neurons becomes shorter and thicker but remains attached to the migrating from the VZ, these neurons traverse long pial surface. At the end of somal translocation the nucleus distances using a mode of migration that has been termed of the cell has moved out of the VZ and into the embryonic “tangential migration”, because the route of migration cortex. traverses the contour of developing cortical mantle tangen- As development proceeds, the brain becomes larger and tially. Tangential migration involves a variety of signaling the primary mode of neuronal migration from the VZ pathways not seen in radial migration. Neurons use a changes. Because of the greater distances, neurons require number of guidance molecules produced in local regions what was originally identified as a special population of along their migratory route to direct their movement into cells within the VZ called “radial glial guides” to support the cortex (Marin and Rubenstein 2001; Huang 2009; their migration (Rakic 1972). Much like neurons migrating Valiente and Marin 2010). via somal translocation, radial glial guides extend a basal The migration of neurons into the developing neocortex process that attaches to the pial surface of the brain. results in the formation of an orderly 6-layered structure However, the nucleus of the radial glial cells remains in the (Cooper 2008). With one exception, earlier migrating VZ, and the basal process forms a kind of scaffolding along neurons form deepest layers of cortex and later migrating which neurons can migrate (see Fig. 8b). The migrating neurons form successively more superficial layers (see neurons attach themselves to the radial glial guide and Fig. 9a) such that the order of migration has been described move along the cellular scaffold out into the developing as inside-out. The exception to the inside-out rule is the cortical plate (Nadarajah and Parnavelas 2002). Each glial very earliest set of migrating neurons. These first neurons to scaffold can support the migration of many neurons. leave the proliferative zone initially form a primitive Although the radial glial guides were originally thought to structure called the preplate (PP; see Fig. 9b, first panel). be a special, transient population of cells, it has recently Once the preplate is complete, the next wave of migrating been discovered that the cells that provide the scaffolding neurons splits the preplate into two separate regions, the Neuropsychol Rev (2010) 20:327–348 337 a Fig. 9b, third panel). The MZ contains an important class of cells, the Cajal-Retzius cells (CR), that control the positioning of neurons into the correct layers of cortex. The CR cells produce a molecular signal, called Reelin, that is part of the pathway that signals neurons when to stop migrating and take up their positions in cortex (Bielle et al. 2005; Huang 2009; Valiente and Marin 2010). Each new wave of migrating neurons bypasses the previous wave of neurons such that each new wave of migrating cells assumes the most superficial position within the developing cortex. As each new wave of neurons reaches the top of the cortical plate, it moves into the zone of Reelin signaling and b receives the cue to stop. The cortex of animals with defects in Reelin signaling lack laminar structure; the preplate fails to split, and the neurons simply conglomerate under the abnormal preplate (Rice and Curran 2001). Finally, neurons in the subplate layer do not participate in the formation of cortical layers, but as will be discussed later, they are essential for establishing the primary sensory inputs to the developing neocortex. Neuron Differentiation The different layers of cortex contain different types of neurons. One question is how these different classes of neurons are derived. This question was addressed by McConnell and colleagues (McConnell and Kaznowski 1991; Frantz and McConnell 1996; Desai and McConnell Fig. 9 a. The earliest produced neurons migrate to the deepest cortical 2000) in a series of studies that asked whether different layers (dark blue). Subsequently migrating neurons migrate to succes- subsets of progenitor cells produce specific kinds of sively more superficial layers (lighter blues) creating an inside out order neurons, or if the same progenitor is capable of producing of migration. Adapted with permission from Cooper (2008). Trends in Neuroscience, 31(3), 113-19. b. As shown in the first panel, the first multiple neuron types? They found that early in cortico- neurons migrate from the ventricular zone (VZ) to form the preplate genesis neural progenitor cells are capable of producing any (PP). As shown in the second panel, the next neurons split the PP into neuron type, but that with development they became more the marginal zone (MZ) an the subplate (SP), both transient brain and more restricted in the types of neurons they can structures. The mature brain, shown in the third panel, has six well developed cortical layers (I-VI), but none of the embryonic structures produce. McConnell and colleagues used progenitor cell (MZ, SP, VZ). The intermediate zone (IZ) has become a mature white transplant studies to examine this question. They took matter layer (WM). Illustrations by Matthew Stiles Davis reprinted by dividing progenitor cells from a host fetus of a particular permission of the publisher from THE FUNDAMENTALS OF BRAIN age, and transplanted the cells into a donor animal of a DEVELOPMENT: INTEGRATING NATURE AND NURTURE by Joan Stiles, Cambridge, Mass.: Harvard University Press, Copyright © different age. The key question was, what kinds of neurons 2008 by the President and Fellows of Harvard College do the transplanted progenitors produce in the host environment? In the first experiment, progenitor cells were taken from young donor animals (if left in the donor these marginal zone (MZ) and the subplate (SP). These neurons progenitors would produce neurons for layer 6 of cortex), begin to form a new region between the MZ and SP that is and transplanted them into an older host (whose progenitors the emerging cortical plate (CP; see Fig. 9b, second panel). were producing layer 2–3 neurons). The transplanted The first neurons to arrive in the CP are the cells that will progenitors produced layer 2–3 neurons suggesting that form cortical layer 6, the deepest layer of cortex, subsequently some kind of signaling from the host induced a change in migrating cells will form progressively more superficial layers the type of neurons being produced by the transplanted of cortex. progenitors. However, when the timing was reversed and Both the MZ and the SP are transient brain layers that progenitors from an older host were transplanted to a play a critical role in the development of the cortex, but younger animal, the progenitors continued to produce cells both largely disappear by the end of the fetal period (see appropriate for the donor animal. It appears that early in 338 Neuropsychol Rev (2010) 20:327–348 corticogenesis progenitor cells can receive signals to instructive input to the TC neurons during this period. In produce any neural cell line, but as development proceeds the absence of subplate neuron signaling, normal patterns and these early cell types are no longer needed, the of connectivity between TC axons and layer 4 cortical progenitor loses the capacity to generate those cells, neurons do not develop. A similar pattern of instructive exhibiting what is termed fate restriction. While there is connectivity is seen in the development of the CT pathway. evidence that fate restriction may be at least in part Prior to the establishment of connections between neurons controlled by cell intrinsic signaling (Shen et al. 2006; from the deep layers of cortex (layers 5 and 6) and the Leone et al. 2008) the particular signaling pathways that thalamus, subplate neurons extend and establish connec- induce these shifts in the progenitor population remain tions with thalamic neurons. It is thought that the subplate poorly defined (Molyneaux et al. 2007). connections may serve to guide the CT axons to their Once they have reached their target region of cortex, the positions in the thalamus. Once the TC and CT pathways young neurons need to become part of information are complete, the subplate neurons retract their connections processing networks. In order to become integrated into and the cells themselves gradually die off. neural networks, the neurons need to develop neuronal processes (axons and dendrites) that allow them to Regressive Events in Prenatal Brain Development communicate with other neurons. Axons are the principal means of sending signals from the neuron, while dendrites While most neurodevelopmental events involve the prolif- are major sites for receiving input from other neurons. Each eration of neural elements, two important processes involve cell has many dendrites that form dense “arbors” in the substantial loss of neural elements. These two processes immediate vicinity of the cell, and a single axon that can include naturally occurring cell death, which involves the extend for some distance away from the cell. At the tip of normal loss of 50% or more of the neurons within a brain each axon is a structure called a growth cone. The growth region; and synaptic exuberance and pruning in which there cone is the site of axon elongation and extension (Brown et is massive excess production of connections followed by al. 2001). As the axon is extended, the growth cone samples the systematic elimination of up to 50% of those con- the local environment for guidance molecules that direct the nections. Both of these processes reflect nonpathological axon toward its target. Some guidance cues are attractive events that play an essential role in establishing the and signal movement toward a source, others are repulsive complex networks of the developing brain. The timescales and guide movement away. Once the axon has reached its of these two sets of events are different. Most naturally target, connections called synapses are formed with the occurring cell death in neuronal populations occurs prenatally, target cell. Synapses allow for the transmission of electro- while both cell death in glia populations and the events chemical information which is the essential means of involving exuberant production and pruning of connections communication in the brain. are largely postnatal events. This section will consider cell Two of the most important pathways in the brain are the death in neural populations during the prenatal period. The ones that transmit sensorimotor information, the thalamo- major postnatal regressive events will be discussed in the next cortical (TC) and corticothalamic (CT) pathways. The TC section. relays sensory and motor information from the receptors in There are two broad categories of cell death. Necrotic the retina, cochlea, muscle or skin to the sensorimotor cell death is a pathological process that follows insult or regions of the neocortex via the major subcortical sensori- injury to a population of cells and is a mechanism for motor relay, the thalamus. The CT pathway completes the eliminating damaged tissue from the biological system. feedback loop by transmitting information from cortex back Apoptosis is a distinct form of cell death that reflects a to the thalamus. These essential pathways begin to form in highly regulated sequence of physiological events. Apoptosis the later part of the second trimester in humans, and are is a well-understood cell-intrinsic process. It involves a complete by GW 26 (Kostovic and Jovanov-Milosevic cascade of gene expression that ultimately results in the 2006). The cells of the transient subplate layer of the breakdown of nuclear chromatin (DNA and support proteins) developing brain (see Fig. 9b) play an essential role in and the fragmenting of the cell. All neurons and neural establishing these pathways. When TC axons arrive at the progenitor cells (as well as many other types of cells) have this developing cortex during GW22 they do not immediately intrinsic “suicide” program. The set of genes involved in the make connections with neurons in the primary input layer apoptotic cascade is large, but very specific, with each of cortex (layer 4). Rather, they initially make connections molecular signal triggering the next step in the cascade. A with the neurons of the subplate layer. The TC-subplate wide variety of cell intrinsic and environmental factors can connections last for approximately 4 weeks, during which influence the apoptotic process. Some trigger cell death, while time the subplate neurons make connections with neurons others protect the cell by preventing the cascade. Apoptosis in cortical layer 4. The subplate neurons appear to provide has been documented within all of the neuronal and neural Neuropsychol Rev (2010) 20:327–348 339 progenitor cell compartments in the human brain (Rakic and proliferation, migration, differentiation, and regression during Zecevic 2000). Across the cortex, rates of apoptosis within the postnatal period in humans, and about the timing of these all layers is high, reaching 70% in some regions (Rabinowicz processes relative to each other. In vivo brain imaging of et al. 1996). children is providing important clues about the time course of One factor that protects against the apoptosis cascade is age-related biological alterations in the brain, and provides an uptake of neurotrophic substances (Levi-Montalcini 1964; opportunity to link these changes to evolving behavior. Oppenheim 1989). Neurotrophic factors are produced by target neurons at synaptic sites, and are taken up by the Postnatal Proliferation and Migration afferent neurons that make effective connections with the targets (Huang and Reichardt 2001). During development it In the postnatal period, neurogenesis continues to only a is thought that neurons compete for neurotrophic resources. very limited degree; however, in the subventricular zone, According to the neurotrophic hypothesis (Oppenheim new neurons continue to emerge and migrate to the 1989), neurons that establish effective connections are able olfactory bulb, and neurons are also produced in the dentate to obtain more neurotrophic factor and are more likely to gyrus of the hippocampus, where they migrate from the survive. Thus one important function of cell death in brain subgranular layer only as far as the nearby granular layer. development is its role in regulating the establishment of These exceptional forms of neurogenesis appear to continue effective and functional neural circuits (Buss et al. 2006). In throughout adult life but produce only a small percentage of addition, a number of other functions for cell death have the neuronal population. In contrast, proliferation and been proposed. Although the evidence is somewhat limited, migration of glial progenitors, while beginning prenatally, cell death may serve as a mechanism for correcting errors in continue for a protracted period as oligodendrocytes and neuronal production or migration (Buss and Oppenheim astrocytes differentiate; in fact, glial progenitors (particularly 2004). There is substantial evidence that cell death plays an oligodendrocyte progenitor cells, or OPCs) appear to persist essential role in eliminating cell populations that serve only indefinitely in the adult brain in a wide anatomical distribu- a transient function in brain development, such as cells of tion, and can differentiate in response to injury. Glial the MZ or SP. Importantly there is strong evidence of high progenitors proliferate in the forebrain subventricular zone levels of cell death in the neural progenitor population (de and migrate outward into the overlying white matter and la Rosa and de Pablo 2000; Yeo and Gautier 2004). Rates cortex, striatum, and hippocampus, where they differentiate of apoptosis in the VZ increase across the period of into oligodendrocytes and astrocytes. Unlike neural progen- corticogenesis suggesting gradual elimination of this itors, glial progenitors continue to proliferate as they migrate important but transient cell population. Note that the (Cayre et al. 2009). mechanism for triggering cell death in the MZ, SP or progenitor cell populations must differ from those discussed Myelination for neurons. None of these populations contain cells that enter neural networks, thus the specific effects of neurotrophin Upon reaching its destination, an OPC begins to differen- availability are not likely associated with the apoptotic tiate by extending processes and increasing myelin protein pathways in these cells groups. expression. The processes then begin to form membrane wraps around nearby axons. Eventually the oligodendrocyte forms tightly wrapped multi-layered sheaths from which Brain Development in the Postnatal Period most of the cytoplasm has been extruded. The dramatic increase in axonal conduction velocity associated with Though the production and migration of neurons are myelination is well known. However, recent research largely prenatal events, proliferation and migration of suggests that functional interactions between oligodendro- glial progenitors continues for an extended period after cytes and neurons extend far beyond the effects of the birth, and the differentiation and maturation of these cells electrically insulating sheath. Oligodendrocytes synthesize continue throughout childhood. The full scope of neuron-glia a number of trophic factors that appear to contribute to the interactions is still not fully defined, but it is clear that these maintenance of axonal integrity and neuronal survival, and interactions play an important role in functional organization neuron-oligodendrocyte interactions have been shown to of neural circuits during postnatal life. Importantly, estimates influence neuronal size and axon diameter (McTigue and of the developmental time course in humans of the postnatal Tripathi 2008). An intriguing new line of evidence also processes outlined below are derived by extrapolation from suggests that a subset of the OPCs dispersed throughout the data acquired in other species, often rodents, and from very brain form excitatory and inhibitory connections with limited human postmortem material. Unfortunately, the result neurons, and thus may contribute actively and directly to is much remaining uncertainty about the temporal extent of neural signaling (Lin and Bergles 2004). 340 Neuropsychol Rev (2010) 20:327–348 In summary, proliferation and migration of glial precursors exuberance of connectivity extends beyond the sheer and differentiation of astrocytes and oligodendrocytes are numbers of connections within a brain region. Early in largely postnatal processes. While there is little doubt that these development transient connections form throughout the processes play a critical role in the functional maturation of brain, which are not observed in adults. Exuberant developing neural circuits, the full scope of their impact on connectivity has been documented in pathways as diverse neural dynamics may be much greater than was previously as the corpus callosum, thalamocortical pathways, cortico- appreciated. Ongoing research continues to uncover additional spinal tract and pathways linking the temporal lobe and the molecular interactions between neurons, oligodendrocytes, limbic system (Stanfield et al. 1982; Stanfield and O’Leary and astrocytes. The existence of these interactions implies that 1985; Innocenti and Price 2005). Many factors affect the the late maturation of glial populations probably has wide- retention or elimination of pathways. Competition for spread functional implications. resources such as neurotrophic factors plays a significant Regressive Events in the Postnatal Period Cell Death in Glial Populations As described above, brain development involves overproduction of neurons and glial cells, neural processes, and synapses. Although neural apoptosis has its peak during prenatal life, apoptosis in glial cell populations has a time course corresponding to the protracted postnatal time course of differentiation from glial precursors. During the period of initial myelination, many excess oligodendrocytes undergo apoptosis a few days after differentiating, and there is evidence that this process depends on signals from nearby axons, such that the number of surviving oligodendrocytes matches the local axonal surface area (see McTigue and Tripathi 2008, for review). Synaptic Exuberance and Pruning Although the develop- ment of neural networks requires the formation of precise connections between developing neurons and their targets, it is well documented that initial patterns of connectivity in the developing brain are exuberant in terms of both the numbers of connections formed and their topography. This exuberance can be observed on two very different time scales that appear to support different aspects of the process of emerging connectivity in the developing brain. At a macroscopic level, exuberance and pruning can be observed within major brain areas and pathways on timescales that extend over months or even years. But at a microscopic level very rapid formation and retraction of connections can Fig. 10 Synaptic connectivity in the primate brain exhibits initial be observed at the level of individual neurons over periods exuberant production followed by gradual pruning. a. In primate brain, the number of synaptic contacts per probe was plotted along a of minutes or hours. logarithmic scale as a function of days after conception (DAC). At the macroscropic level, studies of both monkeys and Months after birth (MAB) are indicated along the top of the graph, humans have documented widespread exuberant production birth (B) at 166 days post conception is indicated by the thin vertical of connections throughout all brain regions in the early line and puberty (P) at 3–4 years by the thick vertical line.Reprinted with permission from Bourgeois and Rakic (1993). “Changes of postnatal period (Zecevic et al. 1989; Bourgeois and Rakic synaptic density in the primary visual cortex of the macaque monkey 1993; Bourgeois et al. 1994; Huttenlocher and de Courten from fetal to adult stage.” Journal of Neuroscience 13(7): 2801–2820, 1987; Huttenlocher and Dabholkar 1997). Across brain Fig. 3. b. In human brains, counts of the number of synapses per areas, the number of synapses plateaus at levels nearly constant volume of tissue were measured as a function of pre- and postnatal age. Adapted with permission from Huttenlocher and twice as high as those observed in the adult brain, and then Dabholkar (1997). Regional differences in synaptogenesis in human slowly declines to normal adult levels across the period of cerebral cortex. Journal of Comparative Neurology, 387, 167–178, childhood and adolescence (see Fig. 10a and b). But, the Fig. 2 Neuropsychol Rev (2010) 20:327–348 341 role in selection of pathways. Importantly, afferent input synaptic density in cortex during childhood (Huttenlocher plays a critical role in modulating the stabilization or and Dabholkar 1997), but it remains unclear to what extent elimination of pathways. these factors, and perhaps others, contribute to the changing Recent studies using real time imaging have begun to morphology observed with MRI. Data shown in Fig. 11, document the processes of exuberance and pruning at a plotting estimated volumes of brain structures across the more microscopic level. These studies suggest that as axons lifespan, illustrate that during childhood and adolescence seek their targets they very rapidly sample the surrounding changes in brain structure are at least as dramatic as those at space forming and retracting synaptic connections in a the end of life. The plots illustrate results from an extended dynamic, ongoing and balanced fashion (Hua and Smith age-range for volumes of particular brain structures (modified 2004). Thus at the level of individual neurons the processes from Jernigan and Gamst 2005). Shown are continuous age- associated with exuberant production and retraction of related decreases in volume of frontal cortex, thalamus, and connections provide rapid sampling of the local environment nucleus accumbens across the lifespan, and increases in and serve to support axon guidance and target detection. cerebral white matter volume during childhood and early adulthood that give way to decreases later in life. All Imaging Studies of Brain Morphology volumes are normalized for cranial volume—which does not change appreciably over this age range. Since MRI is a safe technique for use in children it has now More recent MR morphometry studies have provided been applied widely in pediatric imaging, and it reveals more anatomical detail by employing mapping methods for dramatic changes in the tissues of the developing brain visualizing the pattern of age-related change (Giedd, Snell during the postnatal brain growth spurt. These MRI signal and et al. 1996; Giedd, Vaituzis and et al. 1996; Sowell et changes reflect alterations in tissue chemistry that are al. 1999a; Sowell et al. 1999b; Sowell et al. 2002). Studies presumed to mark the proliferation of oligodendrocytes of developing children describe the protracted course of and deposition of myelin, and they reveal much about the postnatal white matter growth and establish that before timing and anatomical distribution of these processes adolescence the volume of tissue with the MR signal (Barkovich 2000; Barkovich 2005). The visual appearance characteristics of “gray matter” begins to decline concur- of the brain on MR images changes appreciably over the rently in locations throughout the brain, e.g., in cerebral first 2 to 3 years of life, mirroring an orderly pattern of cortex and deep nuclei. The most detailed studies, employing myelination in white matter regions. However the changes both high-resolution mapping techniques and longitudinal in gross brain structure that continue past this age are assessments (Gogtay et al. 2004; Sowell et al. 2004) have subtler, and were not well described until after quantitative revealed a modal pattern of childhood and adolescent change morphometry techniques were applied. Early MR morphometry in the cerebral cortex that includes not only widespread, studies comparing brain morphology in children and adults regionally specific, apparent cortical thinning, but more showed that gray matter volumes, both in the cerebral cortex and limited areas of cortical thickening as well. On average, in subcortical nuclei, were considerably larger in school-aged cortical thinning appears to occur first in primary sensory- children than in young adults (Jernigan and Tallal 1990; motor cortex and then to progress into secondary, then Jernigan et al. 1991; Pfefferbaum et al. 1994). This suggested multimodal, and then supramodal cortical areas throughout that tissue alterations related to brain maturation might be childhood and adolescence. A recent study [Ostby et al. much more protracted during childhood than was generally 2009] confirmed these observations in a large cross-sectional supposed, and that some of these alterations might be sample and provided concurrent estimates of cortical surface regressive; that is, they might involve tissue loss. These area and cortical thickness. This is an important contribution findings were confirmed and extended by later studies (see since studies of cortical volume conflate these factors, and no Toga et al. 2006 for a review), but the underlying tissue previous studies had addressed whether the changes in alterations remain a matter of speculation. The size of the cortical thickness are accompanied by alterations of surface cranial vault increases dramatically after birth but very little area as well. Ostby et al. (2009) report that between the ages after the first decade. However, the MRI results suggest that of 8 and 30 years more modest decreases in cortical surface throughout childhood and adolescence effects of waning area accompany robust decreases in cortical thickness. progressive changes, associated with continuing maturation of An important issue germane to the interpretation of these glial populations and neurotrophic effects, are opposed by effects is their relationship to myelination. At the most basic concurrent regressive changes, perhaps associated with level, cortical “thinning” could simply reflect increased “pruning” of neuronal processes. These observations are myelination in the white matter tracts coursing within and consistent with ample histological evidence for ongoing near the deepest layer of cortex. In other words the “gray” myelination across this period (Yakovlev and Lecours 1967), signal of the unmyelinated fibers could simply be becoming and more limited, but persuasive, evidence for reduction of more “white” as myelin is deposited. This is clearly a part of 342 Neuropsychol Rev (2010) 20:327–348 Fig. 11 Estimated volumes of brain structures in normal volunteers matter. Note the rapid age-related change (and striking individual are plotted against age. The volumes in the figures are presented as differences) in the childhood and adolescent age-range. (Figures standardized residuals (removing variability associated with volume of modified from Jernigan & Gamst, Neurobiology of Aging, 26 (9), the supratentorial cranial vault). They are, from left, volumes of 1271–1274, 2005) frontal cortex, thalamus, nucleus accumbens, and cerebral white what is measured as cortical thinning with morphometry, Diffusion Imaging of Fiber Tract Development especially in younger children. However, there is evidence that true regressive changes also occur in some structures— Diffusion imaging measures the diffusion of water mole- probably due to loss or simplification of neuronal processes cules through the tissue. A common use of diffusion (dendrites and/or axons). This can be inferred from the fact imaging involves fitting, for each voxel, a mathematical that the progressive changes that would be expected to result function called a tensor, that estimates proton diffusion from continuing myelination do not seem to increase cranial (motion) along each of 3 orthogonal spatial axes. Tensors volume in late childhood (as though they were opposed by from voxels in the brain with high water content, such as in some regressive factor); and from the fact that there are ventricles, exhibit high levels of proton diffusion that has modest but significant CSF volume increases adjacent to the no preferred direction; i.e., the diffusion is random, or cortical surface and in the ventricular system over this age- isotropic. Diffusion in gray matter voxels is lower but also range, as might be expected, ex vacuo, in the wake of the loss relatively isotropic. However, in voxels that contain fiber of neural elements in the adjacent tissues (Jernigan et al. bundles, the diffusion is higher along the long axis of the 1991; Sowell et al. 2002). fibers. This directionality of the diffusion is usually Using mapping methods, Sowell et al. (2004) reported measured as an index of anisotropy, usually as fractional similarities in the patterns of brain growth and cortical anisotropy (FA). It has been shown that proton diffusion in density reductions and interpreted this as evidence that the cerebral white matter of human newborns is high, and local cortical thinning might bear a direct relationship to exhibits low anisotropy (Hermoye et al. 2006). As the fiber myelination of nearby fiber tracts; but the nature of this tracts mature, and myelination proceeds, diffusion declines, relationship remains unclear. It is possible that functional and anisotropy (or FA) increases. By examining the change changes resulting from maturation of fiber tracts stimulate in detail, i.e., by measuring the three tensor eigenvalues cortical thinning (or thickening), or, conversely, that (each a measure of the amount of diffusion along one of the increasing activity due to intrinsic cortical maturation spatial axes), it has been shown that developmental increase stimulates myelination of the axons in the maturing in FA often reflects a decrease in all three diffusivities, network. Neuron-glia signaling mechanisms mediating which is, however, smaller in the principal eigenvalue (i.e., effects of action potentials on oligodendrocyte differentia- in diffusion along the long axis of the tracts). The tion and myelination have been reported (see Fields and interpretation (Suzuki et al. 2003) is that unrestricted water Burnstock 2006 for review); therefore it is plausible that in extra-axonal space declines, decreasing tissue diffusivity increasing activity in neural circuits plays a role both in overall, while diffusion within and/or along the membranes myelination and in stimulating intracortical structural of the axons remains relatively constant or increases. The alterations.. However, the interactions among these factors denser packing of axons that results from myelination and in developing brain tissues are still poorly understood. In increases in axonal diameter are likely to reduce diffusion summary, MR morphometry studies reveal a complex by decreasing extra-axonal water. How alterations of fiber pattern of development in brain structure during childhood morphology or intra-axonal diffusion contribute to changing and hint that ongoing maturation of fiber tracts probably tensor values is less well understood. Nevertheless, there is plays a key role. Only recently, however, has it been growing evidence that alterations reflected in and measurable possible to examine the maturation of fiber tracts directly, with diffusion imaging continue throughout childhood and using diffusion tensor imaging (DTI) (Basser et al. 1994; adolescence (Schneider et al. 2004; Barnea-Goraly et al. Mori and van Zijl 1995). 2005; Snook et al. 2005). The pattern of FA increases, for Neuropsychol Rev (2010) 20:327–348 343 example, suggests that FA reaches asymptote earliest in long In summary, in vivo brain imaging is opening a window projection, then commissural, and finally association fibers, on continuing brain development during infancy and the latter continuing to exhibit age-related FA increases well childhood. As the imaging techniques mature, and the into adulthood (see Huppi and Dubois 2006; Mukherjee and biological significance of the signals they record are more McKinstry 2006 for reviews; Cascio et al. 2007). firmly established, these techniques promise to reveal much Lebel et al. (2008, Lebel and Beaulieu 2009) reported more about the dynamic interactions within human brain diffusion imaging results in a large group of typically tissues that attend the molecular and microstructural events developing children and young adults. Robust increases in described in this review. FA across the age-range from 5–12 years were observed within fiber tracts defined with manual and semiautomated tractography. In Fig. 12 the cross-sectional results are The Role of Experience in Brain Development shown for 4 major tracts: the corpus callosum (splenium), the inferior and superior longitudinal fasciculi, and the The events of the prenatal period serve to establish the core inferior fronto-occipital fascicului. These plots reveal the compartments of the developing nervous system from the rapid change in FA in young school-aged children and also spinal cord and hindbrain to the cortical structures of the demonstrate that different tracts vary in the pace with which telencephalon. These early events also provide initial adult values of FA are approached. This group recently patterning within each of the major subdivisions of the reported individual trajectories of tract FA obtained with brain, but this early patterning, particularly in the neocortex, is repeated imaging of school-aged children. Some of the both underspecified and malleable. The mature organization results are shown in Fig. 13: These data were obtained from of the neocortex emerges over a protracted time during the sessions spaced 2 to 4 years apart, but they clearly postnatal period, and it requires diverse forms of input. Some demonstrate that over this age range substantial increases of this input arises from within the organism in the form of in FA occur within individual children, and they suggest molecular signaling and cross-regional activity. But the wide individual differences in the pace of these changes. specific experience of the individual organism also plays an Fig. 12 Cross sectional data from Lebel et al. (2008, Lebel and Beaulieu 2009) showing robust FA increases in 4 major fiber tracts; note rapid change in FA in young school-aged children and variability in the pace at which FA in the different tracts approaches asymptote. Reprinted with permission from Lebel et al. (2008). “Microstructural maturation of the human brain from childhood to adulthood.” Neuroimage 40 (3): 1044–1055 344 Neuropsychol Rev (2010) 20:327–348 Fig. 13 Individual trajectories for sequential measurements of FA in the genu of the corpus callosum (left) and the superior longitudinal fasciculus (SLF) (right), redrawn from Lebel et al. (2008, Lebel and Beaulieu 2009), illustrating individual differences essential role in establishing the mature organization of the and functional organization of the developing brain. neocortex. The development of normal brain organization Greenough has shown that simply rearing animals in either requires input via all of the major sensory systems. When impoverished (standard laboratory cage) or enriched environ- specific aspects of input are lacking, alternative patterns of ments (large enclosures with interesting and changing brain organization can and do emerge. These alternative landmarks and multiple littermates) affects the development patterns of organization reflect the effects of altered profiles of of a wide range of brain structures and functions (Black et al. neural competition and capture a fundamental property of 1987; Greenough and Chang 1988; Jones and Greenough mammalian brain development, the capacity for plastic 1996; Markham and Greenough 2004). Animals reared in adaptation. complex environments show enhancement in density of cortical synapses, increases in the number of brain support The Role of Input on Brain Development cells, and even augmentation of the complexity of the brain vascular system. Further, many of the effects of Greenough introduced the term “experience expectant” rearing in the complex environment persist even when the development to capture the idea that the early experience animal is returned to more impoverished conditions. of the organism plays an essential role in normal brain Sensory deprivation has more selective effects that development, particularly in the early postnatal period target particular cortical sensory systems. The seminal (Greenough et al. 1987). Although cor

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