Neoplasia and Cancer Genes

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Questions and Answers

Which mechanism exemplifies how a chromosome translocation can lead to oncogenesis by altering gene expression?

  • The fusion of two gene fragments to create a novel protein with altered function.
  • A point mutation within the coding region of a tumor suppressor gene.
  • The deletion of a microRNA gene, leading to reduced post-transcriptional regulation of target mRNAs.
  • The translocation of an oncogene to a chromosomal region with high transcriptional activity, resulting in its overexpression. (correct)

A researcher observes that a cancer cell line exhibits resistance to apoptosis despite the presence of DNA damage. Further investigation reveals increased expression of BCL-2. How does BCL-2 contribute to this resistance?

  • By directly stimulating cell proliferation through activation of growth factor signaling pathways.
  • By inhibiting the release of cytochrome c from mitochondria, preventing the activation of caspases. (correct)
  • By downregulating the expression of pro-apoptotic proteins, shifting the balance towards cell survival.
  • By promoting DNA repair mechanisms, thereby correcting the DNA damage and preventing apoptosis.

How do homogeneously staining regions (HSRs) contribute to cancer development, and what is their origin?

  • HSRs represent sites of active DNA repair, preventing genomic instability and cancer progression.
  • HSRs are formed through epigenetic silencing of repetitive DNA sequences, altering chromatin structure.
  • HSRs originate from integrated double-minute chromosomes (DMs), leading to stable amplification of oncogenes. (correct)
  • HSRs arise from the initial deletion of tumor suppressor genes and promote loss of heterozygosity.

A scientist discovers a novel mutation in a gene that regulates tumor-immune interactions. Which of the following mechanisms is MOST likely to be affected by this mutation?

<p>Enhanced expression of major histocompatibility complex (MHC) molecules on tumor cells. (A)</p> Signup and view all the answers

What is the primary distinction between driver mutations and mutations in apoptosis regulator genes in the context of cancer development?

<p>Driver mutations directly initiate and promote tumor growth, while mutations in apoptosis regulator genes primarily enhance cancer cell survival. (D)</p> Signup and view all the answers

Following exposure to a mutagen, a cell exhibits increased activity in the PI3K-AKT and JAK-STAT pathways. How might this alteration contribute to cancer development?

<p>By enhancing cell survival and resistance to apoptosis. (D)</p> Signup and view all the answers

In the context of cancer genetics, what is the significance of epigenetic modifications, and how do they differ from genetic mutations?

<p>Epigenetic modifications are heritable changes in gene expression without altering the DNA sequence, whereas genetic mutations involve alterations to the DNA sequence itself. (C)</p> Signup and view all the answers

A researcher is investigating a new cancer therapy that aims to reactivate tumor suppressor genes silenced by DNA methylation. Which of the following mechanisms would BEST describe the action of this therapy?

<p>Blocking the activity of DNA methyltransferases (DNMTs) to reduce DNA methylation and restore gene expression. (A)</p> Signup and view all the answers

A patient is diagnosed with Chronic Myeloid Leukemia (CML) characterized by the presence of the Philadelphia chromosome. How does the BCR-ABL fusion protein contribute to the pathogenesis of CML?

<p>It possesses constitutive tyrosine kinase activity, leading to uncontrolled proliferation of myeloid cells. (C)</p> Signup and view all the answers

When considering mutations in cancer, what is the significance of the 'two-hit hypothesis' in the context of tumor suppressor genes?

<p>It proposes that both alleles of a tumor suppressor gene must be inactivated to eliminate its function and promote tumor development. (C)</p> Signup and view all the answers

Flashcards

Neoplasia

Mutations in genes that regulate cell behavior, leading to uncontrolled cell growth and tumor formation.

Proto-oncogenes

Normal genes that regulate cell growth; can become oncogenes if mutated or overexpressed.

Tumor Suppressor Genes

Genes that normally prevent uncontrolled cell growth; inactivation leads to cancer progression.

Driver Mutations

Mutations that directly contribute to tumor formation and progression by affecting cell division or survival.

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Point Mutations

Single nucleotide substitutions or small insertions/deletions that can activate oncogenes or inactivate tumor suppressor genes.

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Chromosomal Rearrangements (in cancer)

Chromosome translocations where regulatory elements enhance oncogene expression or create oncogenic fusion proteins.

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Gene Amplifications (in cancer)

Extra copies of oncogenes that increase the production of tumor-promoting proteins, either on double minutes or within chromosomes.

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Philadelphia Chromosome

Balanced translocation between chromosomes 9 and 22 creating a hybrid BCR-ABL protein, increasing tyrosine kinase activity.

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Aneuploidy in Cancer

Gain or loss of entire chromosomes or large portions, disrupting gene expression and affecting cancer-related genes.

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Epigenetic Changes in Cancer

Heritable changes in gene expression without direct DNA mutation, such as histone modifications and DNA methylation.

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Study Notes

  • Neoplasia stems from mutations altering genes regulating normal cell behavior.
  • Genes frequently mutated or dysregulated in cancer are known as cancer genes, numbering around 200.
  • Cancer genes are classified into oncogenes, tumor suppressor genes, apoptosis regulator genes, and interaction regulator genes.

Oncogenes

  • Proto-oncogenes are the normal cellular counterparts of oncogenes.
  • Oncogenes promote increased cell growth when overexpressed or mutated.
  • They typically encode transcription factors or signaling molecules in pro-growth pathways.
  • Oncogenes are dominant, meaning a single allele mutation can produce a pro-oncogenic effect.

Tumor Suppressor Genes

  • Tumor suppressor genes normally prevent uncontrolled growth.
  • Their function is lost in neoplasms via disruptive mutations, epigenetic silencing, or gene repression.
  • Both alleles of a tumor suppressor gene must typically be lost for unregulated cell growth to occur.

Apoptosis Regulator Genes

  • Apoptosis regulator genes primarily enhance cell survival rather than stimulating proliferation.
  • Genes protecting against apoptosis are often overexpressed in cancer, while those promoting it are underexpressed.
  • The overall effect is increased cell survival.

Interaction Regulator Genes

  • Genes that regulate interactions between tumor cells and host cells are frequently mutated in cancers.
  • Genes enhancing or inhibiting tumor cell recognition by the host immune system are particularly important.

Driver Mutations

  • Driver mutations promote cancer development or progression.
  • Most driver mutations affect protein-coding genes, but genes encoding regulatory RNAs, like microRNA, can also be affected.

Point Mutations

  • Point mutations involve single nucleotide substitutions or small insertions and deletions.
  • They can either activate an oncogene or inactivate a tumor suppressor gene, depending on their location and timing.

Large Deletions

  • Large deletions remove an entire gene or several genes.
  • The genes removed often have tumor suppression functions.

Chromosome Rearrangements

  • Chromosome rearrangements frequently appear as translocations, causing significant changes in chromosome structure.
  • In some cases, the rearrangement places a strong regulatory element near an oncogene, leading to overexpression of a normal protein.

Fusion Proteins

  • Chromosome rearrangement can lead to the creation of a chimeric gene which encodes an oncogenic fusion protein composed of portions of two different proteins.
  • These rearrangements are common in blood cancers and sarcomas.

MYC Gene

  • Balanced translocation involving chromosomes 8 and 14 places the MYC gene near strong regulatory elements of the immunoglobulin heavy chain gene, leading to MYC overexpression.
  • MYC is an oncogenic transcription factor.

Chronic Myeloid Leukemia

  • In chronic myeloid leukemia, a balanced translocation involving chromosomes 9 and 22 creates a chimeric gene containing BCR and ABL gene pieces.
  • This encodes a chimeric BCR-ABL fusion protein with constitutively active tyrosine kinase activity.

Gene Amplifications

  • Gene amplifications produce extra copies of one or more oncogenes.
  • This is another way to increase the level of protein with oncogenic activity.
  • Amplified genes can be carried in extra-chromosomal DNA fragments, known as double-minute chromosomes.
  • They can be present within a chromosome, appearing as an abnormal, homogeneous staining region.

NYC Gene

  • NYC gene amplification in human neuroblastoma is an example of gene amplification
  • The NYC gene, normally on chromosome 2p, becomes amplified.
  • It appears either as extra-chromosomal double minutes or as a chromosomally integrated homogeneous staining region.
  • NYC is structurally related to MYC and is an oncogenic transcription factor.

Aneuploidy

  • Aneuploidy is defined as gains or losses of whole chromosomes or large portions thereof.
  • How this causes cancer is incompletely understood.
  • It is believed to involve changes in the expression of cancer genes in affected chromosomal regions.

Epigenetic Changes

  • Epigenetic changes are heritable alterations in gene expression without mutation of the gene.
  • Gene expression is regulated by post-translational histone modifications and DNA methylation.
  • Both are frequently altered in cancer cells compared to normal cells.
  • The contribution of epigenetic alterations is not fully understood but is likely significant in most instances of cancer.

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