Modified Gram Stain & OF Tests

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modified gram stain (Burke modification)

A modified Gram stain using methyl violet, NaHCO3, iodine, acetone, and safranin for 2 minutes.

glucose non-fermenter TSI

Alkaline/No Change; indicates that the organism doesn't ferment glucose.

oxidative-fermentation test (OF) medium includes

Medium used to determine if an organism is oxidative or fermentative, containing 1% carbs, peptones, and a lower agar concentration.

acid production in both OF tubes

The organism is a fermenter and can produce acid both aerobically and anaerobically.

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acid production only in open OF tube

The organism is a glucose oxidizer (non-fermenter), producing acid only in the presence of oxygen.

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no acid production in either OF tube

The organism doesn't produce acid in either open or closed tubes, meaning it cannot utilize the carbohydrate source.

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Hugh-Leifson OF indicator?

Bromthymol blue.

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King's OF indicator?

Phenol red.

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color of OF tube if acid produced?

Yellow.

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glucose to mixed & lactic acids, which pathway?

Embden-Meyerhoff (fermentation).

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glucose to pyruvic acid to Kreb's cycle, which pathway?

Entner-Duoderoff (oxidation).

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porphyrin test purpose?

To determine if a Haemophilus strain requires X factor (hemin) for growth.

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porphyrin test: X-independent strains secrete enzymes in the biosynthesis of ________

Heme.

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adding kovac's reagent, red = porphyrin presence. biosynthesis of heme = ?

NO need for X factor.

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LAP (leucine aminopeptidase) test purpose?

Disk test to detect leucine aminopeptidase activity, indicated by a pink color after adding cinnamaldehyde reagents.

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enterococcus and some other strep are LAP ______; aerococcus is LAP _______

Enterococcus and some other strep are LAP positive; aerococcus is LAP negative.

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P. aeruginosa POSITIVES (OMEGA U)

Oxidase, Motile, Elastase, Gelatinase, Arginine, and Urease.

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P. aeruginosa: type of fermenter?

Non-fermenter (glucose oxidation).

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P. aeruginosa gram morph

Gram-negative long, thin rods.

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P. aeruginosa hemolysis, odor?

Beta-hemolysis; grape-like or tortilla-like odor.

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pyocyanin: color? chloroform __________

Blue, non-fluorescent; chloroform soluble.

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pyoverdine: color? chloroform ______________

Yellow, fluorescent; chloroform-insoluble.

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environment P. aeruginosa prefers

Moist environments: sinks, catheters, sponges, hot tubs.

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P. aeruginosa virulence factor?

Exotoxin A.

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exotoxin A in P. aeruginosa is similar to which toxin?

Diphtheria toxin.

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how does exotoxin A from P. aeruginosa inhibit protein synthesis?

By ADP ribosylation.

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true or false: systemic effects of Pseudomonas Exotoxin A (PEA) always affect

True.

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typical P. aeruginosa infections & who it affects?

UTIs, septicemia, respiratory disease (CF), wound/sepsis, osteomyelitis; affects immunocompromised.

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P. aeruginosa sepsis is often manifested by appearnce of

Ecthyma gangrenosum.

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P. aeruginosa folliculitis associated with?

Hot tubs & whirlpools.

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in Cystic Fibrosis (CF), bacteria clog the

Alveoli.

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P. aeruginosa highly resistant to antibiotics, but is sensitive to ____________________

Sensitive to colistin/polymixin B.

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CF isolates of P. aeruginosa look like? what are they more sensitive to?

Mucoid, shorter rods; more sensitive to antibiograms.

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what are other fluorescent species of pseudomonas besides P. aeruginosa?

P. fluorescens and P. putida.

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how to differentiate P. aeruginosa from P. fluorescens & P. putida?

P. aeruginosa grows at 42C & reduces nitrate.

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P. stutzeri general description

Non-fluorescent, wrinkled, light-brown colonies.

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P. luteola & P. oryzihabitan general description

Oxidase negative, orange or yellow pigment.

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how to type P. aeruginosa infections?

Molecular fingerprinting.

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Burkholderia important pathogenic species

cepacia complex (sp cepacia), mallei, pseudomallei.

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Burkholderia oxidase, catalase, motlity?

Oxidase variable, catalase positive, motile.

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Burkholderia gram morph

Gram-negative straight or curved rods.

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Burkholderia can grow on

BAP, MAC.

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pigment for B. cepacia?

Yellow.

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Burkholderia cepacia complex has how many different genomovars

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Burkholderia infections

Respiratory disease (contributes to CF), septicemia, soft tissue infections, ocular infections.

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in CF patients, B. cepacia complex infections occurs after _________________ infection

Pseudomonas.

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which agar is used for specimens from CF patients w/ Burkholderia

BCSA (B. cepacia selective agar).

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B. cepacia complex septicemia is more common in patients with?

Granulomatous disease (affecting ability of phagocytes to kill).

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B. cepacia vs. B. gladioli: oxidase & sucrose?

cepacia = oxidase + sucrose+; gladioli = oxidase - sucrose -.

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like pseudomonas, burkholderia is often resistant to antibiotics & forms ?

Biofilms.

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is antibiotic susceptibility important in non-CF patients?

Yes.

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which species of Burkholderia are BT agents?

mallei and pseudomallei.

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what do both B. mallei & B. pseudomallei cause? how do they spread?

Ulcers & respiratory infections; spread via many routes including inhalation.

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B. mallei: growth at 42C? motility? oxidase? nitrate?

No growth at 42C, non-motile, oxidase variable, nitrate negative.

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B. pseudomallei: growth at 42C? motility? oxidase? nitrate?

Growth 42C, motile, oxidase positive, nitrate positive.

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B. mallei gram & colony morph

Gram-negative coccobacilli; grey colonies.

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B. pseudomallei gram & colony morph

Gram-negative bipolar bacilli; white colonies.

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what are both B. mallei & B. pseudomallei negative for?

Indole.

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Burkholderia colistin/polymixin B?

Resistant.

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Stenotrophomonas maltophilia previously named

Pseudomonas maltophilia.

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S. maltophilia oxidase? glucose?

Oxidase negative, glucose variable.

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S. maltophilia grows on?

BAP, MAC.

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third most common non-fermenter in clinical lab (behind Pseudomonas & Acinetobacter)?

S. maltophilia.

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S. maltophilia infections

Septicemia, respiratory tract, UTIs, skin & soft tissue, endocarditis, meningitis, ocular infections.

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S. maltophilia primarily affects

Immunocompromised & hospitalized pts.

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S. maltophilia septicemia associated with

Catheter use.

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S. maltophilia infections tend to be

Rare, but associated with high mortality rate when they do occur.

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S. maltophilia color on BAP? odor?

Lavender-green; ammonia.

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selective media used for S. maltophilia

VIA, SM2i, GNSA.

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which organism is extremely resistant to antimicrobials (more than Pseudomonas)?

S. maltophilia.

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unusual characteristics S. maltophilia

Oxidase negative, maltose positive, lysine positive, Dnase positive, gelatinase positive, ONPG positive.

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Acinetobacter general characteristics

Non-motile, oxidase negative, catalase positive, difficult to destain/decolorize.

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Acinetobacter grows on? pigment?

BAP, MAC; no pigment.

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among the non-fermenters, which organism is relatively biochemically inert

Acinetobacter.

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major pathogen of Acinetobacter

Ac. baumannii.

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Ac. baumannii is part of what complex?

Ac. calcoaceticus-Ac. baumannii.

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Acinetobacter infections

Pneumonia, septicemia, wounds, UTI, meningitis.

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risk factors for Acinetobacter infections

Surgery, hospitalization, medical implantation devices.

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Acinetobacter pneumonia infection associated with

Alcohol abuse, smoking, COPD, diabetes.

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Acinetobacter: risk factors for septicemia include ____________ score

APACHE (acute physiology & chronic health evaluation) score.

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Acinetobacter wound infections seen in?

Military & burn patients.

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Acinetobacter grows well on? odor?

BAP, MAC; fish odor.

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Acinetobacter NEGATIVE for...

All decarboxylases, nitrate, motility, oxidase.

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Aceintobacter is glucose...

Variable.

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how can Ac. baumannii be separated by other groups

Grows 41C & glucose oxidation.

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Acinetobacter memory device?

Acineto = inert: No pigment, decarboxylases, motility, or oxidase.

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in general, non-fermenters are catalase _________ and gram _______

Catalase positive and Gram-negative.

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in general, non-fermenters are found where?

Widespread in environment; many hospital sources (sinks, showers, medical devices, humidifiers).

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in general, non-fermenters tend to like ___________ environments & form _________

Moist environments and form biofilms.

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in general, non-fermenters infections tend to include? which two orgs can cause meningitis

Respiratory infections, septicemia, wound infections, UTIs, meningitis (Acineto & Steno).

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most common GN non-fermenters in order?

Pseudomonas > Acinetobacter > Stenotrophomonas.

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oxidase & motility for each GN non-fermenters?

Pseudomonas = ox +, motile; Burkholderia = motor V, motile; Stenotrophomonas = ox -, motile; Acinetobacter = ox -, non-motile.

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shows multi-drug resistance, which is the most resistant organism from GN non-fermenters?

Stenotrophomonas.

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colistin/Polymixin B: Pseudomonas vs. Burkholderia

Pseudomonas = susceptible; Burkholderia = resistant.

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Haemophilus general characteristics

Gram-negative rod (possibly filamentous), oxidase +, non-motile, facultative anaerobe, fastidious, requires X &/or V factors from blood.

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how does Haemophilus differ from Enterobacteriaceae?

Haemophilus is oxidase +.

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Haemophilus is part of normal flora in

Nasopharynx.

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Haemophilus influenzae infections

Meningitis, pneumonia, sinusitis, otitis media, cellulitis.

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is meningitis a reportable disease?

Yes.

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mode of transmission H. influenzae

Droplet infection.

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Study Notes

Modified Gram Stain (Burke Modification)

  • Utilizes methyl violet with NaHCO3, iodine, acetone, and safranin (2 min).

Glucose Non-Fermenter TSI Reaction

  • Yields a K/NC (alkaline/no change) reaction with growth on Triple Sugar Iron (TSI) agar.

Oxidative-Fermentation (OF) Medium

  • Contains 1% carbohydrates and peptones.
  • Features a lower peptone concentration to prevent alkaline reactions from masking acid production.
  • Has a reduced agar concentration for improved visualization.

OF Test: Acid Production in Both Tubes

  • Indicates the organism is a fermenter.

OF Test: Acid Production Only in Open Tube

  • Classifies the organism as a glucose oxidizer (non-fermenter).

OF Test: No Acid Production in Either Tube

  • Indicates the organism is assachrolytic (unable to break down sugars).

Hugh-Leifson OF Indicator

  • Uses bromthymol blue as an indicator.

King's OF Indicator

  • Employs phenol red, which is less toxic.

OF Tube Color with Acid Production

  • Turns yellow.

Embden-Meyerhoff Pathway

  • Converts glucose to pyruvic acid, then to mixed and lactic acids (strong acids).

Entner-Duoderoff Pathway

  • Converts glucose to pyruvic acid, then to the Krebs cycle (weak acid production).

Porphyrin Test

  • Determines the X factor requirement in Haemophilus species.

Porphyrin Test and X-Independent Strains

  • X-independent strains secrete enzymes in heme biosynthesis.

Porphyrin Test Interpretation

  • Red color after adding Kovac's reagent indicates porphyrin presence; heme biosynthesis occurs, so the organism does not need X factor.

Leucine Aminopeptidase (LAP) Test

  • A disk test, similar to PYR.
  • Hydrolysis of substrate releases B-napthylamide.
  • Combines with cinnamaldehyde reagents to form a pink color.

LAP Test Results

  • Enterococcus and some other streptococci are LAP positive.
  • Aerococcus is LAP negative.

Pseudomonas aeruginosa Positives (OMEGA U)

  • Oxidase, motile, elastase, gelatinase, arginine dihydrolase, and urease positive.

Pseudomonas aeruginosa Fermentation Type

  • Non-fermenter, utilizes glucose oxidation.

Pseudomonas aeruginosa Gram Stain Morphology

  • Gram-negative, long, thin rods.

Pseudomonas aeruginosa Hemolysis and Odor

  • Exhibits beta-hemolysis and produces a grape-like or tortilla-like odor.

Pyocyanin Characteristics

  • Blue pigment, non-fluorescent, chloroform soluble, and water-soluble.

Pyoverdine Characteristics

  • Yellow pigment, fluorescent, chloroform-insoluble, and water-soluble.

Pseudomonas aeruginosa Environmental Preference

  • Thrives in moist environments such as sinks, catheters, sponges, and hot tubs.

Pseudomonas aeruginosa Virulence Factor

  • Exotoxin A.

Pseudomonas aeruginosa Exotoxin A Similarity

  • Similar to diphtheria toxin.

Pseudomonas aeruginosa Exotoxin A Mechanism

  • Inhibits protein synthesis by ADP ribosylation.

Pseudomonas aeruginosa Exotoxin A Systemic Effects

  • Can be expressed systemically but does not always cause systemic effects.

Pseudomonas aeruginosa Infections

  • Affects the immunocompromised.
  • Causes UTIs, septicemia, respiratory disease (CF), wound/sepsis, and osteomyelitis.

Pseudomonas aeruginosa Sepsis Manifestation

  • Often presents with ecthyma gangrenosum.

Pseudomonas aeruginosa Folliculitis

  • Associated with hot tubs and whirlpools.

Pseudomonas aeruginosa and Cystic Fibrosis (CF)

  • Clogs the alveoli in CF patients.

Pseudomonas aeruginosa Antibiotic Sensitivity

  • Highly resistant to antibiotics but sensitive to colistin/polymixin B.

Pseudomonas aeruginosa CF Isolates

  • Mucoid, shorter rods.
  • More sensitive to antibiograms.

Other Fluorescent Pseudomonas Species

  • Pseudomonas fluorescens and Pseudomonas putida.

Differentiation of Pseudomonas aeruginosa

  • P. aeruginosa grows at 42°C and reduces nitrate.

Pseudomonas stutzeri Characteristics

  • Non-fluorescent, wrinkled, light-brown colonies.

Pseudomonas luteola & Pseudomonas oryzihabitan Characteristics

  • Oxidase negative and produce an orange or yellow pigment.

Pseudomonas aeruginosa Typing

  • Utilizes molecular fingerprinting for typing.

Important Pathogenic Burkholderia Species

  • cepacia complex (sp cepacia), mallei, and pseudomallei.

Burkholderia Characteristics

  • Oxidase variable, catalase positive, and motile.

Burkholderia Gram Stain Morphology

  • Gram-negative straight or curved rods.

Burkholderia Growth

  • Can grow on Blood Agar Plate (BAP) and MacConkey agar (MAC).

Burkholderia cepacia Pigment

  • Yellow pigment.

Burkholderia cepacia Complex Genomovars

  • Consists of 9 different genomovars.

Burkholderia Infections

  • Causes respiratory disease (contributes to CF), septicemia, soft tissue infections, and ocular infections.

Burkholderia cepacia Complex in CF Patients

  • Infections often occur after Pseudomonas infections.

Selective Agar for Burkholderia in CF Patients

  • Burkholderia cepacia selective agar (BCSA).

Burkholderia cepacia Complex Septicemia

  • More common in patients with granulomatous disease.

Burkholderia cepacia vs. Burkholderia gladioli

  • B. cepacia: oxidase positive, sucrose positive.
  • B. gladioli: oxidase negative, sucrose negative.

Burkholderia Antibiotic Resistance

  • Is often resistant to antibiotics and forms biofilms, similar to Pseudomonas.

Burkholderia Antibiotic Susceptibility

  • Is very important in non-CF patients.

Burkholderia Species as Bioterrorism (BT) Agents

  • B. mallei and B. pseudomallei.

Burkholderia mallei & Burkholderia pseudomallei Infections

  • Cause ulcers and respiratory infections, spread via inhalation, and various other routes.

Burkholderia mallei Characteristics

  • No growth at 42°C, non-motile, oxidase variable, and nitrate negative.

Burkholderia pseudomallei Characteristics

  • Grows at 42°C, motile, oxidase positive, and nitrate positive.

Burkholderia mallei Morphology

  • Gram-negative coccobacilli, forming grey colonies.

Burkholderia pseudomallei Morphology

  • Gram-negative bipolar bacilli, forming white colonies.

Burkholderia mallei & Burkholderia pseudomallei

  • Are both negative for indole production.

Burkholderia Colistin/Polymixin B Resistance

  • Burkholderia is resistant.

Stenotrophomonas maltophilia

  • Was previously named Pseudomonas maltophilia.

Stenotrophomonas maltophilia Characteristics

  • Oxidase negative, glucose variable.

Stenotrophomonas maltophilia Growth

  • Grows on BAP and MAC.

Stenotrophomonas maltophilia Prevalence

  • The third most common non-fermenter in clinical labs.

Stenotrophomonas maltophilia Infections

  • Causes septicemia, respiratory tract infections, UTIs, skin and soft tissue infections, endocarditis, meningitis, and ocular infections.

Stenotrophomonas maltophilia Patients Affected

  • Primarily affects immunocompromised and hospitalized patients.

Stenotrophomonas maltophilia Septicemia

  • Associated with catheter use.

Stenotrophomonas maltophilia Infections Mortality Rate

  • Infections are rare, but have a high mortality rate when they occur.

Stenotrophomonas maltophilia Color and Odor

  • Lavender-green color on BAP and produces an ammonia odor.

Selective Media for Stenotrophomonas maltophilia

  • Utilizes VIA, SM2i, and GNSA.

Stenotrophomonas maltophilia Antibiotic Resistance

  • Extremely resistant to antimicrobials, more so than Pseudomonas.

Stenotrophomonas maltophilia Unusual Characteristics

  • Oxidase negative, maltose positive, lysine positive, DNase positive, gelatinase positive, and ONPG positive.

Acinetobacter General Characteristics

  • Non-motile, oxidase negative, catalase positive, and difficult to decolorize during Gram staining.

Acinetobacter Growth and Pigment

  • Grows on BAP and MAC, and produces no pigment.

Acinetobacter Biochemical Activity

  • Relatively biochemically inert among non-fermenters.

Acinetobacter Major Pathogen

  • Acinetobacter baumannii.

Acinetobacter baumannii Complex

  • Part of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex.

Acinetobacter Infections

  • Causes pneumonia, septicemia, wounds, UTIs, and meningitis.

Acinetobacter Infection Risk Factors

  • Surgery, hospitalization, and medical implantation devices.

Acinetobacter Pneumonia Risk Factors

  • Alcohol abuse, smoking, COPD, and diabetes.

Acinetobacter Septicemia Risk Factors

  • Include a high APACHE (acute physiology & chronic health evaluation) score.

Acinetobacter Wound Infections

  • Seen in military and burn patients.

Acinetobacter Growth and Odor

  • Grows well on BAP and MAC, producing a fishy odor.

Acinetobacter Negative Reactions

  • Negative for all decarboxylases, nitrate reduction, motility, and oxidase production.

Acinetobacter Glucose Use

  • Glucose variable.

Acinetobacter baumannii Differentiation

  • Can be differentiated by growth at 41°C and glucose oxidation.

Acinetobacter Memory Device

  • Acineto = inert: No pigment, decarboxylases, motility, nitrate, or oxidase.

General Non-Fermenter Characteristics

  • Catalase positive and Gram-negative.

General Non-Fermenter Habitat

  • Widespread in the environment and found in many hospital sources.

General Non-Fermenter Environmental Preference

  • Tend to like moist environments forming biofilms.

General Non-Fermenter Infections

  • Tend to include respiratory infections, septicemia, wound infections, and UTIs; Acinetobacter and Stenotrophomonas can cause meningitis.

Most Common Gram-Negative Non-Fermenters

  • Pseudomonas > Acinetobacter > Stenotrophomonas.

Oxidase and Motility of Each Gram-Negative Non-Fermenter

  • Pseudomonas: Oxidase positive, motile.
  • Burkholderia: Oxidase variable, motile.
  • Stenotrophomonas: Oxidase negative, motile.
  • Acinetobacter: Oxidase negative, non-motile.

Most Resistant Gram-Negative Non-Fermenter

  • Stenotrophomonas shows multi-drug resistance.

Colistin/Polymixin B Sensitivity

  • Pseudomonas is sensitive.
  • Burkholderia is resistant.

Haemophilus General Characteristics

  • Gram-negative rods (possibly filamentous), oxidase positive, non-motile, facultative anaerobe, fastidious.
  • Requires X and/or V factors from blood.

Haemophilus vs. Enterobacteriaceae

  • Haemophilus is oxidase positive.

Haemophilus Normal Flora

  • Part of the normal flora in the nasopharynx.

Haemophilus influenzae Infections

  • Meningitis, pneumonia, sinusitis, otitis media, and cellulitis.

Meningitis Reporting

  • Meningitis is a reportable disease.

Haemophilus influenzae Transmission

  • Via droplet infection.

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