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modified gram stain (Burke modification)
modified gram stain (Burke modification)
A modified Gram stain using methyl violet, NaHCO3, iodine, acetone, and safranin for 2 minutes.
glucose non-fermenter TSI
glucose non-fermenter TSI
Alkaline/No Change; indicates that the organism doesn't ferment glucose.
oxidative-fermentation test (OF) medium includes
oxidative-fermentation test (OF) medium includes
Medium used to determine if an organism is oxidative or fermentative, containing 1% carbs, peptones, and a lower agar concentration.
acid production in both OF tubes
acid production in both OF tubes
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acid production only in open OF tube
acid production only in open OF tube
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no acid production in either OF tube
no acid production in either OF tube
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Hugh-Leifson OF indicator?
Hugh-Leifson OF indicator?
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King's OF indicator?
King's OF indicator?
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color of OF tube if acid produced?
color of OF tube if acid produced?
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glucose to mixed & lactic acids, which pathway?
glucose to mixed & lactic acids, which pathway?
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glucose to pyruvic acid to Kreb's cycle, which pathway?
glucose to pyruvic acid to Kreb's cycle, which pathway?
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porphyrin test purpose?
porphyrin test purpose?
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porphyrin test: X-independent strains secrete enzymes in the biosynthesis of ________
porphyrin test: X-independent strains secrete enzymes in the biosynthesis of ________
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adding kovac's reagent, red = porphyrin presence. biosynthesis of heme = ?
adding kovac's reagent, red = porphyrin presence. biosynthesis of heme = ?
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LAP (leucine aminopeptidase) test purpose?
LAP (leucine aminopeptidase) test purpose?
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enterococcus and some other strep are LAP ______; aerococcus is LAP _______
enterococcus and some other strep are LAP ______; aerococcus is LAP _______
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P. aeruginosa POSITIVES (OMEGA U)
P. aeruginosa POSITIVES (OMEGA U)
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P. aeruginosa: type of fermenter?
P. aeruginosa: type of fermenter?
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P. aeruginosa gram morph
P. aeruginosa gram morph
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P. aeruginosa hemolysis, odor?
P. aeruginosa hemolysis, odor?
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pyocyanin: color? chloroform __________
pyocyanin: color? chloroform __________
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pyoverdine: color? chloroform ______________
pyoverdine: color? chloroform ______________
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environment P. aeruginosa prefers
environment P. aeruginosa prefers
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P. aeruginosa virulence factor?
P. aeruginosa virulence factor?
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exotoxin A in P. aeruginosa is similar to which toxin?
exotoxin A in P. aeruginosa is similar to which toxin?
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how does exotoxin A from P. aeruginosa inhibit protein synthesis?
how does exotoxin A from P. aeruginosa inhibit protein synthesis?
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true or false: systemic effects of Pseudomonas Exotoxin A (PEA) always affect
true or false: systemic effects of Pseudomonas Exotoxin A (PEA) always affect
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typical P. aeruginosa infections & who it affects?
typical P. aeruginosa infections & who it affects?
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P. aeruginosa sepsis is often manifested by appearnce of
P. aeruginosa sepsis is often manifested by appearnce of
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P. aeruginosa folliculitis associated with?
P. aeruginosa folliculitis associated with?
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in Cystic Fibrosis (CF), bacteria clog the
in Cystic Fibrosis (CF), bacteria clog the
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P. aeruginosa highly resistant to antibiotics, but is sensitive to ____________________
P. aeruginosa highly resistant to antibiotics, but is sensitive to ____________________
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CF isolates of P. aeruginosa look like? what are they more sensitive to?
CF isolates of P. aeruginosa look like? what are they more sensitive to?
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what are other fluorescent species of pseudomonas besides P. aeruginosa?
what are other fluorescent species of pseudomonas besides P. aeruginosa?
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how to differentiate P. aeruginosa from P. fluorescens & P. putida?
how to differentiate P. aeruginosa from P. fluorescens & P. putida?
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P. stutzeri general description
P. stutzeri general description
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P. luteola & P. oryzihabitan general description
P. luteola & P. oryzihabitan general description
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how to type P. aeruginosa infections?
how to type P. aeruginosa infections?
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Burkholderia important pathogenic species
Burkholderia important pathogenic species
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Burkholderia oxidase, catalase, motlity?
Burkholderia oxidase, catalase, motlity?
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Burkholderia gram morph
Burkholderia gram morph
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Burkholderia can grow on
Burkholderia can grow on
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pigment for B. cepacia?
pigment for B. cepacia?
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Burkholderia cepacia complex has how many different genomovars
Burkholderia cepacia complex has how many different genomovars
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Burkholderia infections
Burkholderia infections
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in CF patients, B. cepacia complex infections occurs after _________________ infection
in CF patients, B. cepacia complex infections occurs after _________________ infection
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which agar is used for specimens from CF patients w/ Burkholderia
which agar is used for specimens from CF patients w/ Burkholderia
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B. cepacia complex septicemia is more common in patients with?
B. cepacia complex septicemia is more common in patients with?
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B. cepacia vs. B. gladioli: oxidase & sucrose?
B. cepacia vs. B. gladioli: oxidase & sucrose?
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like pseudomonas, burkholderia is often resistant to antibiotics & forms ?
like pseudomonas, burkholderia is often resistant to antibiotics & forms ?
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is antibiotic susceptibility important in non-CF patients?
is antibiotic susceptibility important in non-CF patients?
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which species of Burkholderia are BT agents?
which species of Burkholderia are BT agents?
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what do both B. mallei & B. pseudomallei cause? how do they spread?
what do both B. mallei & B. pseudomallei cause? how do they spread?
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B. mallei: growth at 42C? motility? oxidase? nitrate?
B. mallei: growth at 42C? motility? oxidase? nitrate?
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B. pseudomallei: growth at 42C? motility? oxidase? nitrate?
B. pseudomallei: growth at 42C? motility? oxidase? nitrate?
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B. mallei gram & colony morph
B. mallei gram & colony morph
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B. pseudomallei gram & colony morph
B. pseudomallei gram & colony morph
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what are both B. mallei & B. pseudomallei negative for?
what are both B. mallei & B. pseudomallei negative for?
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Burkholderia colistin/polymixin B?
Burkholderia colistin/polymixin B?
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Stenotrophomonas maltophilia previously named
Stenotrophomonas maltophilia previously named
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S. maltophilia oxidase? glucose?
S. maltophilia oxidase? glucose?
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S. maltophilia grows on?
S. maltophilia grows on?
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third most common non-fermenter in clinical lab (behind Pseudomonas & Acinetobacter)?
third most common non-fermenter in clinical lab (behind Pseudomonas & Acinetobacter)?
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S. maltophilia infections
S. maltophilia infections
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S. maltophilia primarily affects
S. maltophilia primarily affects
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S. maltophilia septicemia associated with
S. maltophilia septicemia associated with
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S. maltophilia infections tend to be
S. maltophilia infections tend to be
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S. maltophilia color on BAP? odor?
S. maltophilia color on BAP? odor?
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selective media used for S. maltophilia
selective media used for S. maltophilia
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which organism is extremely resistant to antimicrobials (more than Pseudomonas)?
which organism is extremely resistant to antimicrobials (more than Pseudomonas)?
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unusual characteristics S. maltophilia
unusual characteristics S. maltophilia
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Acinetobacter general characteristics
Acinetobacter general characteristics
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Acinetobacter grows on? pigment?
Acinetobacter grows on? pigment?
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among the non-fermenters, which organism is relatively biochemically inert
among the non-fermenters, which organism is relatively biochemically inert
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major pathogen of Acinetobacter
major pathogen of Acinetobacter
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Ac. baumannii is part of what complex?
Ac. baumannii is part of what complex?
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Acinetobacter infections
Acinetobacter infections
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risk factors for Acinetobacter infections
risk factors for Acinetobacter infections
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Acinetobacter pneumonia infection associated with
Acinetobacter pneumonia infection associated with
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Acinetobacter: risk factors for septicemia include ____________ score
Acinetobacter: risk factors for septicemia include ____________ score
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Acinetobacter wound infections seen in?
Acinetobacter wound infections seen in?
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Acinetobacter grows well on? odor?
Acinetobacter grows well on? odor?
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Acinetobacter NEGATIVE for...
Acinetobacter NEGATIVE for...
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Aceintobacter is glucose...
Aceintobacter is glucose...
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how can Ac. baumannii be separated by other groups
how can Ac. baumannii be separated by other groups
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Acinetobacter memory device?
Acinetobacter memory device?
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in general, non-fermenters are catalase _________ and gram _______
in general, non-fermenters are catalase _________ and gram _______
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in general, non-fermenters are found where?
in general, non-fermenters are found where?
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in general, non-fermenters tend to like ___________ environments & form _________
in general, non-fermenters tend to like ___________ environments & form _________
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in general, non-fermenters infections tend to include? which two orgs can cause meningitis
in general, non-fermenters infections tend to include? which two orgs can cause meningitis
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most common GN non-fermenters in order?
most common GN non-fermenters in order?
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oxidase & motility for each GN non-fermenters?
oxidase & motility for each GN non-fermenters?
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shows multi-drug resistance, which is the most resistant organism from GN non-fermenters?
shows multi-drug resistance, which is the most resistant organism from GN non-fermenters?
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colistin/Polymixin B: Pseudomonas vs. Burkholderia
colistin/Polymixin B: Pseudomonas vs. Burkholderia
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Haemophilus general characteristics
Haemophilus general characteristics
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how does Haemophilus differ from Enterobacteriaceae?
how does Haemophilus differ from Enterobacteriaceae?
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Haemophilus is part of normal flora in
Haemophilus is part of normal flora in
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Haemophilus influenzae infections
Haemophilus influenzae infections
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is meningitis a reportable disease?
is meningitis a reportable disease?
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mode of transmission H. influenzae
mode of transmission H. influenzae
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Study Notes
Modified Gram Stain (Burke Modification)
- Utilizes methyl violet with NaHCO3, iodine, acetone, and safranin (2 min).
Glucose Non-Fermenter TSI Reaction
- Yields a K/NC (alkaline/no change) reaction with growth on Triple Sugar Iron (TSI) agar.
Oxidative-Fermentation (OF) Medium
- Contains 1% carbohydrates and peptones.
- Features a lower peptone concentration to prevent alkaline reactions from masking acid production.
- Has a reduced agar concentration for improved visualization.
OF Test: Acid Production in Both Tubes
- Indicates the organism is a fermenter.
OF Test: Acid Production Only in Open Tube
- Classifies the organism as a glucose oxidizer (non-fermenter).
OF Test: No Acid Production in Either Tube
- Indicates the organism is assachrolytic (unable to break down sugars).
Hugh-Leifson OF Indicator
- Uses bromthymol blue as an indicator.
King's OF Indicator
- Employs phenol red, which is less toxic.
OF Tube Color with Acid Production
- Turns yellow.
Embden-Meyerhoff Pathway
- Converts glucose to pyruvic acid, then to mixed and lactic acids (strong acids).
Entner-Duoderoff Pathway
- Converts glucose to pyruvic acid, then to the Krebs cycle (weak acid production).
Porphyrin Test
- Determines the X factor requirement in Haemophilus species.
Porphyrin Test and X-Independent Strains
- X-independent strains secrete enzymes in heme biosynthesis.
Porphyrin Test Interpretation
- Red color after adding Kovac's reagent indicates porphyrin presence; heme biosynthesis occurs, so the organism does not need X factor.
Leucine Aminopeptidase (LAP) Test
- A disk test, similar to PYR.
- Hydrolysis of substrate releases B-napthylamide.
- Combines with cinnamaldehyde reagents to form a pink color.
LAP Test Results
- Enterococcus and some other streptococci are LAP positive.
- Aerococcus is LAP negative.
Pseudomonas aeruginosa Positives (OMEGA U)
- Oxidase, motile, elastase, gelatinase, arginine dihydrolase, and urease positive.
Pseudomonas aeruginosa Fermentation Type
- Non-fermenter, utilizes glucose oxidation.
Pseudomonas aeruginosa Gram Stain Morphology
- Gram-negative, long, thin rods.
Pseudomonas aeruginosa Hemolysis and Odor
- Exhibits beta-hemolysis and produces a grape-like or tortilla-like odor.
Pyocyanin Characteristics
- Blue pigment, non-fluorescent, chloroform soluble, and water-soluble.
Pyoverdine Characteristics
- Yellow pigment, fluorescent, chloroform-insoluble, and water-soluble.
Pseudomonas aeruginosa Environmental Preference
- Thrives in moist environments such as sinks, catheters, sponges, and hot tubs.
Pseudomonas aeruginosa Virulence Factor
- Exotoxin A.
Pseudomonas aeruginosa Exotoxin A Similarity
- Similar to diphtheria toxin.
Pseudomonas aeruginosa Exotoxin A Mechanism
- Inhibits protein synthesis by ADP ribosylation.
Pseudomonas aeruginosa Exotoxin A Systemic Effects
- Can be expressed systemically but does not always cause systemic effects.
Pseudomonas aeruginosa Infections
- Affects the immunocompromised.
- Causes UTIs, septicemia, respiratory disease (CF), wound/sepsis, and osteomyelitis.
Pseudomonas aeruginosa Sepsis Manifestation
- Often presents with ecthyma gangrenosum.
Pseudomonas aeruginosa Folliculitis
- Associated with hot tubs and whirlpools.
Pseudomonas aeruginosa and Cystic Fibrosis (CF)
- Clogs the alveoli in CF patients.
Pseudomonas aeruginosa Antibiotic Sensitivity
- Highly resistant to antibiotics but sensitive to colistin/polymixin B.
Pseudomonas aeruginosa CF Isolates
- Mucoid, shorter rods.
- More sensitive to antibiograms.
Other Fluorescent Pseudomonas Species
- Pseudomonas fluorescens and Pseudomonas putida.
Differentiation of Pseudomonas aeruginosa
- P. aeruginosa grows at 42°C and reduces nitrate.
Pseudomonas stutzeri Characteristics
- Non-fluorescent, wrinkled, light-brown colonies.
Pseudomonas luteola & Pseudomonas oryzihabitan Characteristics
- Oxidase negative and produce an orange or yellow pigment.
Pseudomonas aeruginosa Typing
- Utilizes molecular fingerprinting for typing.
Important Pathogenic Burkholderia Species
- cepacia complex (sp cepacia), mallei, and pseudomallei.
Burkholderia Characteristics
- Oxidase variable, catalase positive, and motile.
Burkholderia Gram Stain Morphology
- Gram-negative straight or curved rods.
Burkholderia Growth
- Can grow on Blood Agar Plate (BAP) and MacConkey agar (MAC).
Burkholderia cepacia Pigment
- Yellow pigment.
Burkholderia cepacia Complex Genomovars
- Consists of 9 different genomovars.
Burkholderia Infections
- Causes respiratory disease (contributes to CF), septicemia, soft tissue infections, and ocular infections.
Burkholderia cepacia Complex in CF Patients
- Infections often occur after Pseudomonas infections.
Selective Agar for Burkholderia in CF Patients
- Burkholderia cepacia selective agar (BCSA).
Burkholderia cepacia Complex Septicemia
- More common in patients with granulomatous disease.
Burkholderia cepacia vs. Burkholderia gladioli
- B. cepacia: oxidase positive, sucrose positive.
- B. gladioli: oxidase negative, sucrose negative.
Burkholderia Antibiotic Resistance
- Is often resistant to antibiotics and forms biofilms, similar to Pseudomonas.
Burkholderia Antibiotic Susceptibility
- Is very important in non-CF patients.
Burkholderia Species as Bioterrorism (BT) Agents
- B. mallei and B. pseudomallei.
Burkholderia mallei & Burkholderia pseudomallei Infections
- Cause ulcers and respiratory infections, spread via inhalation, and various other routes.
Burkholderia mallei Characteristics
- No growth at 42°C, non-motile, oxidase variable, and nitrate negative.
Burkholderia pseudomallei Characteristics
- Grows at 42°C, motile, oxidase positive, and nitrate positive.
Burkholderia mallei Morphology
- Gram-negative coccobacilli, forming grey colonies.
Burkholderia pseudomallei Morphology
- Gram-negative bipolar bacilli, forming white colonies.
Burkholderia mallei & Burkholderia pseudomallei
- Are both negative for indole production.
Burkholderia Colistin/Polymixin B Resistance
- Burkholderia is resistant.
Stenotrophomonas maltophilia
- Was previously named Pseudomonas maltophilia.
Stenotrophomonas maltophilia Characteristics
- Oxidase negative, glucose variable.
Stenotrophomonas maltophilia Growth
- Grows on BAP and MAC.
Stenotrophomonas maltophilia Prevalence
- The third most common non-fermenter in clinical labs.
Stenotrophomonas maltophilia Infections
- Causes septicemia, respiratory tract infections, UTIs, skin and soft tissue infections, endocarditis, meningitis, and ocular infections.
Stenotrophomonas maltophilia Patients Affected
- Primarily affects immunocompromised and hospitalized patients.
Stenotrophomonas maltophilia Septicemia
- Associated with catheter use.
Stenotrophomonas maltophilia Infections Mortality Rate
- Infections are rare, but have a high mortality rate when they occur.
Stenotrophomonas maltophilia Color and Odor
- Lavender-green color on BAP and produces an ammonia odor.
Selective Media for Stenotrophomonas maltophilia
- Utilizes VIA, SM2i, and GNSA.
Stenotrophomonas maltophilia Antibiotic Resistance
- Extremely resistant to antimicrobials, more so than Pseudomonas.
Stenotrophomonas maltophilia Unusual Characteristics
- Oxidase negative, maltose positive, lysine positive, DNase positive, gelatinase positive, and ONPG positive.
Acinetobacter General Characteristics
- Non-motile, oxidase negative, catalase positive, and difficult to decolorize during Gram staining.
Acinetobacter Growth and Pigment
- Grows on BAP and MAC, and produces no pigment.
Acinetobacter Biochemical Activity
- Relatively biochemically inert among non-fermenters.
Acinetobacter Major Pathogen
- Acinetobacter baumannii.
Acinetobacter baumannii Complex
- Part of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex.
Acinetobacter Infections
- Causes pneumonia, septicemia, wounds, UTIs, and meningitis.
Acinetobacter Infection Risk Factors
- Surgery, hospitalization, and medical implantation devices.
Acinetobacter Pneumonia Risk Factors
- Alcohol abuse, smoking, COPD, and diabetes.
Acinetobacter Septicemia Risk Factors
- Include a high APACHE (acute physiology & chronic health evaluation) score.
Acinetobacter Wound Infections
- Seen in military and burn patients.
Acinetobacter Growth and Odor
- Grows well on BAP and MAC, producing a fishy odor.
Acinetobacter Negative Reactions
- Negative for all decarboxylases, nitrate reduction, motility, and oxidase production.
Acinetobacter Glucose Use
- Glucose variable.
Acinetobacter baumannii Differentiation
- Can be differentiated by growth at 41°C and glucose oxidation.
Acinetobacter Memory Device
- Acineto = inert: No pigment, decarboxylases, motility, nitrate, or oxidase.
General Non-Fermenter Characteristics
- Catalase positive and Gram-negative.
General Non-Fermenter Habitat
- Widespread in the environment and found in many hospital sources.
General Non-Fermenter Environmental Preference
- Tend to like moist environments forming biofilms.
General Non-Fermenter Infections
- Tend to include respiratory infections, septicemia, wound infections, and UTIs; Acinetobacter and Stenotrophomonas can cause meningitis.
Most Common Gram-Negative Non-Fermenters
- Pseudomonas > Acinetobacter > Stenotrophomonas.
Oxidase and Motility of Each Gram-Negative Non-Fermenter
- Pseudomonas: Oxidase positive, motile.
- Burkholderia: Oxidase variable, motile.
- Stenotrophomonas: Oxidase negative, motile.
- Acinetobacter: Oxidase negative, non-motile.
Most Resistant Gram-Negative Non-Fermenter
- Stenotrophomonas shows multi-drug resistance.
Colistin/Polymixin B Sensitivity
- Pseudomonas is sensitive.
- Burkholderia is resistant.
Haemophilus General Characteristics
- Gram-negative rods (possibly filamentous), oxidase positive, non-motile, facultative anaerobe, fastidious.
- Requires X and/or V factors from blood.
Haemophilus vs. Enterobacteriaceae
- Haemophilus is oxidase positive.
Haemophilus Normal Flora
- Part of the normal flora in the nasopharynx.
Haemophilus influenzae Infections
- Meningitis, pneumonia, sinusitis, otitis media, and cellulitis.
Meningitis Reporting
- Meningitis is a reportable disease.
Haemophilus influenzae Transmission
- Via droplet infection.
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