Influenza Virus Genome and Protein Coding

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43 Questions

Which segment of the influenza virus genome codes for a shorter protein PB1-F2?

Segment 2

What is the function of the non-structural protein NS1 in the influenza virus?

Interfering with host cell immune response

What facilitates fusion of viral envelope with the endosomal membrane in the influenza virus?

Cleavage of HA by cellular proteases

Which part of the hemagglutinin (HA) protein binds to sialic acid on cell surface receptors?

HA1 subunit

Where does nucleocapsids enter for mRNA synthesis and RNA replication?

Nucleus

Which protein is involved in 'pinching' the budding virions from the plasma membrane?

M2

What do inhibitors of cellular RNA synthesis block in influenza virus replication?

Replication of influenza virus

What is the primary function of the viral protein M2?

Form an ion channel allowing protons to weaken M1-nucleocapsid interaction

What happens to each genomic RNA segment after transcription?

Segments 1-6 are exported directly to the cytoplasm

What is a potential consequence of targeting M2 with antiviral drugs?

Viral mutations leading to drug resistance

What is the role of matrix protein (M1) and NS2 in relation to nucleocapsids?

Export nucleocapsids from the nucleus

What is required for orthomyxoviruses to replicate?

Complex machinery for viral replication in the nucleus

What do capped cellular pre-mRNAs serve as in influenza virus replication?

Primers for synthesis of viral mRNAs

Where do viral envelope proteins assemble before being incorporated into budding virions?

ER and Golgi

What do viral mRNAs terminate in?

Poly(A) tail

What is the primary role of Uni-12 and Uni-13 sequences in the context of influenza virus?

They are universal primers for PCR amplification

What is the function of the non-structural protein NS1 in influenza virus?

Evasion of host immune response

What is the role of the viral protein M2 in the influenza virus life cycle?

Acts as a proton channel for viral uncoating

What is the consequence of HA cleavage by cellular proteases?

Activation of fusion with endosomes

What is the role of M2 in influenza virus replication?

Forming an ion channel to weaken the interaction of M1 with nucleocapsids

What happens to each genomic RNA segment after transcription in influenza virus?

Exported directly to the cytoplasm

What do inhibitors of cellular RNA synthesis block in influenza virus replication?

The replication of influenza virus

What is the function of the non-structural protein NS1 in the influenza virus?

Interfering with host cell antiviral response

What is a potential consequence of targeting M2 with antiviral drugs?

Viral mutations leading to drug resistance

What do capped cellular pre-mRNAs serve as in influenza virus replication?

Primers for synthesis of viral mRNAs

Where does nucleocapsids enter for mRNA synthesis and RNA replication?

The nucleus

Which part of the hemagglutinin (HA) protein binds to sialic acid on cell surface receptors?

The globular head domain

What facilitates fusion of viral envelope with the endosomal membrane in influenza virus?

Hemagglutinin (HA) protein

What is the role of the non-structural protein NS1 in influenza virus?

Inhibiting host cell mRNA processing and export

Which segment of the influenza virus genome codes for a shorter protein PB1-F2?

Segment 2

What facilitates fusion of viral envelope with the endosomal membrane in the influenza virus?

Cleavage of HA by cellular proteases

What is the primary role of Uni-12 and Uni-13 sequences in the context of influenza virus?

Serving as highly conserved universal primers

What is the role of M2 in influenza virus replication?

Forming an ion channel that allows protons to enter the virus

What is the consequence of targeting M2 with antiviral drugs?

Viral mutations leading to drug resistance

What do capped cellular pre-mRNAs serve as in influenza virus replication?

Primers for synthesis of viral mRNAs

What do inhibitors of cellular RNA synthesis block in influenza virus replication?

Synthesis of viral mRNAs

Where do viral envelope proteins assemble before being incorporated into budding virions?

Golgi apparatus

What is required for orthomyxoviruses to replicate?

Replication in the nucleus with machinery for mRNA synthesis and RNA replication

What happens to each genomic RNA segment after transcription?

Exported directly to the cytoplasm

What is the function of the non-structural protein NS1 in influenza virus?

Interfering with host immune response

What is the primary function of the viral protein M2?

Forming an ion channel that allows protons to enter the virus

Which part of the hemagglutinin (HA) protein binds to sialic acid on cell surface receptors?

Head region

What is a potential consequence of targeting M2 with antiviral drugs?

Viral mutations leading to drug resistance

Study Notes

Influenza Virus Replication and Antiviral Targets

  • The viral protein M2 forms an ion channel that allows protons to enter the virus, weakening the interaction of M1 with nucleocapsids
  • M2 is a target for antiviral drugs, but drug resistance can occur due to viral mutations
  • M2 is a relatively small protein that forms a tetramer and creates a small pore in the virus envelope
  • Nucleocapsids enter the nucleus where mRNA synthesis and RNA replication occur
  • Orthomyxoviruses replicate in the nucleus, requiring complex machinery for viral replication
  • Nucleocapsids are exported from the nucleus in a complex with matrix protein (M1) and NS2
  • Capped cellular pre-mRNAs are used as primers for synthesis of viral mRNAs
  • Inhibitors of cellular RNA synthesis block the replication of influenza virus
  • Each genomic RNA segment contains a stretch of poly-U and viral mRNAs terminate in poly(A) tail
  • Transcription generates a set of 8 viral mRNAs, with segments 1-6 exported directly to the cytoplasm
  • Viral envelope proteins transverse through the ER and Golgi to assemble in the plasma membrane
  • M2 is involved in "pinching" the budding virions from the plasma membrane

Influenza Virus Replication and Antiviral Targets

  • The viral protein M2 forms an ion channel that allows protons to enter the virus, weakening the interaction of M1 with nucleocapsids
  • M2 is a target for antiviral drugs, but drug resistance can occur due to viral mutations
  • M2 is a relatively small protein that forms a tetramer and creates a small pore in the virus envelope
  • Nucleocapsids enter the nucleus where mRNA synthesis and RNA replication occur
  • Orthomyxoviruses replicate in the nucleus, requiring complex machinery for viral replication
  • Nucleocapsids are exported from the nucleus in a complex with matrix protein (M1) and NS2
  • Capped cellular pre-mRNAs are used as primers for synthesis of viral mRNAs
  • Inhibitors of cellular RNA synthesis block the replication of influenza virus
  • Each genomic RNA segment contains a stretch of poly-U and viral mRNAs terminate in poly(A) tail
  • Transcription generates a set of 8 viral mRNAs, with segments 1-6 exported directly to the cytoplasm
  • Viral envelope proteins transverse through the ER and Golgi to assemble in the plasma membrane
  • M2 is involved in "pinching" the budding virions from the plasma membrane

Influenza Virus Replication and Antiviral Targets

  • The viral protein M2 forms an ion channel that allows protons to enter the virus, weakening the interaction of M1 with nucleocapsids
  • M2 is a target for antiviral drugs, but drug resistance can occur due to viral mutations
  • M2 is a relatively small protein that forms a tetramer and creates a small pore in the virus envelope
  • Nucleocapsids enter the nucleus where mRNA synthesis and RNA replication occur
  • Orthomyxoviruses replicate in the nucleus, requiring complex machinery for viral replication
  • Nucleocapsids are exported from the nucleus in a complex with matrix protein (M1) and NS2
  • Capped cellular pre-mRNAs are used as primers for synthesis of viral mRNAs
  • Inhibitors of cellular RNA synthesis block the replication of influenza virus
  • Each genomic RNA segment contains a stretch of poly-U and viral mRNAs terminate in poly(A) tail
  • Transcription generates a set of 8 viral mRNAs, with segments 1-6 exported directly to the cytoplasm
  • Viral envelope proteins transverse through the ER and Golgi to assemble in the plasma membrane
  • M2 is involved in "pinching" the budding virions from the plasma membrane

Test your knowledge of the highly conserved sequences, protein coding, and non-coding regions in the influenza virus genome. Learn about RNA polymerase subunits, envelope glycoprotein, neuraminidase, and alternate splicing.

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