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Questions and Answers
What is the primary function of cytochrome c oxidase?
What is the primary function of cytochrome c oxidase?
- Oxidizing Fe(III) to Fe(II)
- Reducing dioxygen (O2) to water (correct)
- Transferring electrons to cytochrome b
- Facilitating electron transfer between cytosines
Which oxidation states of iron are involved in the function of cytochrome c?
Which oxidation states of iron are involved in the function of cytochrome c?
- Fe(II) and Fe(III) (correct)
- Fe(III) and Fe(I)
- Fe(I) and Fe(IV)
- Fe(0) and Fe(V)
What occupies the 5th and 6th coordination sites of the iron in cytochrome c?
What occupies the 5th and 6th coordination sites of the iron in cytochrome c?
- Valine and Tryptophan
- Histidine and Methionine sulfur (correct)
- Cysteine and Histidine
- Methionine and Arginine
How many amino acids can cytochrome c have in its polypeptide chain?
How many amino acids can cytochrome c have in its polypeptide chain?
What type of redox change does cytochrome c undergo?
What type of redox change does cytochrome c undergo?
Cytochromes are classified based on:
Cytochromes are classified based on:
What structural feature of porphyrin contributes to its rigidity?
What structural feature of porphyrin contributes to its rigidity?
What type of spectroscopy might be used to investigate cytochrome c oxidase?
What type of spectroscopy might be used to investigate cytochrome c oxidase?
What is the primary role of enzymes in biological systems?
What is the primary role of enzymes in biological systems?
Which statement accurately describes Carboxypeptidase A (CPA-1)?
Which statement accurately describes Carboxypeptidase A (CPA-1)?
What characteristic allows chlorophyll to participate effectively in capturing light energy?
What characteristic allows chlorophyll to participate effectively in capturing light energy?
Which wavelengths of light are absorbed by the two reaction centers P680 and P700?
Which wavelengths of light are absorbed by the two reaction centers P680 and P700?
What is produced during the redox reactions initiated by P680 and P700?
What is produced during the redox reactions initiated by P680 and P700?
How do carotenoids contribute to the function of chlorophyll during photosynthesis?
How do carotenoids contribute to the function of chlorophyll during photosynthesis?
What is the molecular weight of Carboxypeptidase A (CPA-1)?
What is the molecular weight of Carboxypeptidase A (CPA-1)?
Which feature differentiates the reaction centers P680 and P700?
Which feature differentiates the reaction centers P680 and P700?
What is the main function of cytochrome c in the reaction with dioxygen?
What is the main function of cytochrome c in the reaction with dioxygen?
How many electrons does each cytochrome c molecule carry?
How many electrons does each cytochrome c molecule carry?
What happens to the protons during the dioxygen reduction process?
What happens to the protons during the dioxygen reduction process?
What is the net product of the electron transfer reaction involving cytochrome c and dioxygen?
What is the net product of the electron transfer reaction involving cytochrome c and dioxygen?
How many protons are required for the complete reduction reaction involving cytochrome c?
How many protons are required for the complete reduction reaction involving cytochrome c?
What triggers the electron transfer process involving cytochrome c?
What triggers the electron transfer process involving cytochrome c?
What is the product formed alongside protons when cytochrome c donates electrons in the reduction of dioxygen?
What is the product formed alongside protons when cytochrome c donates electrons in the reduction of dioxygen?
What structural feature of cytochrome c allows it to carry electrons?
What structural feature of cytochrome c allows it to carry electrons?
Flashcards
Cytochrome Function
Cytochrome Function
Redox-active proteins involved in electron transport and catalysis, using heme-bound iron.
Cytochrome Structure
Cytochrome Structure
Proteins with a heme cofactor containing an iron atom; categorized by heme type and binding.
Cytochrome Classification
Cytochrome Classification
Common types include a, b, c, and d; others exist like cytochrome o and P450.
Cytochrome c Heme Binding
Cytochrome c Heme Binding
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Cytochrome c Oxidase Role
Cytochrome c Oxidase Role
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Heme Structure
Heme Structure
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Redox Potential & Cytochromes
Redox Potential & Cytochromes
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Electron Transfer Process
Electron Transfer Process
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Cytochrome c role in dioxygen reduction
Cytochrome c role in dioxygen reduction
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Protons in dioxygen reduction
Protons in dioxygen reduction
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Chlorophyll structure
Chlorophyll structure
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Chlorophyll function
Chlorophyll function
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Photo-induced electron transfer
Photo-induced electron transfer
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Photosynthesis electron carriers
Photosynthesis electron carriers
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Dioxygen reduction product
Dioxygen reduction product
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Four protons role in dioxygen reduction
Four protons role in dioxygen reduction
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Photosynthesis reaction centers
Photosynthesis reaction centers
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Chlorophyll (Chl)
Chlorophyll (Chl)
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Enzyme function
Enzyme function
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Enzyme substrate
Enzyme substrate
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Carboxypeptidase A (CPA-1)
Carboxypeptidase A (CPA-1)
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Activation energy
Activation energy
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Photosynthesis
Photosynthesis
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Redox reactions
Redox reactions
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Study Notes
Ferritin
- Ferritin is a blood protein that stores iron.
- A ferritin test measures iron stores in the body.
- Ferritin is a universal intracellular protein that stores iron and releases it in a controlled fashion.
- This protein is found in almost all living organisms (archaea, bacteria, algae, plants, and animals).
- In humans, ferritin acts as a buffer against iron deficiency and iron overload.
- Ferritin is a globular protein consisting of 24 protein subunits forming a nanocage.
- It facilitates multiple metal-protein interactions, maintaining iron in a soluble, non-toxic form.
- Ferritin without iron is called apoferritin.
Additional Properties of Ferritin
- Â Ferritin is approximately 12 nm in diameter
- Â The iron core is approximately 8 nm in diameter
- Â The protein shell of ferritin is about 12nm in diameter.
- Â The composition of the iron core is about 8(FeOOH). FeO. H2PO4
Red-brown color observation
- Ferritin displays a red-brown color
- The molecule structure is aspherical shaped and contains a hollow sphere.
Magnetic Behavior & Protein Composition
- Ferritin protein core has a high-spin state of Fe3+ and exhibits anti-ferromagnetic coupling with S = 5/2
- Protein consists of 24 subunits with a molecular weight of 480 kDa
- 8 hydrophilic channels and 6 hydrophobic channels for controlled access to the core
- The Fe core density is 2.5 times that of apoferritin
- Iron enters via hydrophilic channels and exits via hydrophobic channels
- Average channel diameter measures ~ 0.4 nm (as determined by X-ray)
- Molecules larger than 0.4 nm can still penetrate the interior due to conformational flexibility
Protein Channels
- 4-fold channels lined with leucine residues which are hydrophobic
- 3-fold channels lined with glutamate and aspartate residues which are hydrophilic
Iron Release Mechanism
- Iron is released by dissolving the iron lattice structure
- Dihydroxy fumarate is used as a reducing agent
- Iron reacts with water forming a "water cage" around Fe2+, resulting in a hydrated Fe2+ ion
- Fe2+ is released from ferritin through 3-fold protein channels due to polarity reasons
Transferrin
- A protein that transports iron in blood plasma
- Molecule weight of ~ 80 kDa
- Contains two high-affinity iron (III) binding sites
- This glycoprotein binds iron tightly yet reversibly
- High affinity for Fe(III) (association constant ~10^20 at pH 7.4)
- Produced in the liver
Hemoglobin
- A protein responsible for oxygen transport
- Approximate tetramer of myoglobin
- Molecular weight ~ 64,500 g/mol
- Contains four heme groups bound to four protein chains
- Quaternary globins with four subunits; 2α– chains and 2β– chains
- Peptide chains bound through hydrogen bonds, salt bridges, and hydrophobic interactions
Heme
- Organic planar protoporphyrin consisting of four pyrrole rings, four methyl groups, two vinyl groups, and two propionate side chains.
- Inorganic Fe2+ is bonded to four pyrroles and has additional coordination sites on each side of the heme plane
Hemerythrin
- An oxygen carrier that does not contain heme but contains two iron atoms
- Single chain protein of 115 amino acid residues
- Fe atoms (2Fe2+) bound to 2-carboxylates (Aspartic or Glutamic) with 5-imidazole N from histidines
- In blood in the octomeric form and as monomers, dimers, trimers, or tetramers in tissues
Ferredoxin
- Non-heme Fe-S protein
- Mediates electron transfer in metabolic reactions
- Two types of iron-sulfur clusters: [2Fe-2S] and [4Fe-4S]
Chlorophyll
- Green pigments in thylakoid membranes (found in chloroplasts)
- Involved in photosynthesis
- Two types: Chl-a and Chl-b
- Contain a magnesium (Mg2+) center
- Phytyl group for membrane binding
Cytochromes
- Redox-protein containing heme with a central iron atom
- Involved in electron transport of chains and redox catalysis
- Classified based on heme type and binding mode (a, b, c, d)
- Functional groups affect the cytochrome redox potential
Other Natural Oxygen Carriers
- Respiratory metalloproteins in lower animals (Hemerythrin & Hemocyanins) differ from hemoglobin
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Description
This quiz focuses on ferritin, a key blood protein that stores and releases iron in the body. It explores its structure, properties, and biological significance, along with unique observations related to its appearance. Gain a deeper understanding of this essential protein and its role in maintaining iron balance.