Podcast
Questions and Answers
What is formed when an apoenzyme combines with a cofactor?
What is formed when an apoenzyme combines with a cofactor?
Which of the following is a function of coenzymes?
Which of the following is a function of coenzymes?
What type of molecule typically acts as a coenzyme?
What type of molecule typically acts as a coenzyme?
Which of the following vitamins is commonly known to act as a coenzyme?
Which of the following vitamins is commonly known to act as a coenzyme?
Signup and view all the answers
Which of the following statements about cofactors is correct?
Which of the following statements about cofactors is correct?
Signup and view all the answers
Which enzyme class is responsible for the hydrolysis of proteins?
Which enzyme class is responsible for the hydrolysis of proteins?
Signup and view all the answers
What type of reaction do decarboxylases catalyze?
What type of reaction do decarboxylases catalyze?
Signup and view all the answers
Which enzyme class synthesizes larger molecules from smaller ones?
Which enzyme class synthesizes larger molecules from smaller ones?
Signup and view all the answers
Isomerases can facilitate which of the following reactions?
Isomerases can facilitate which of the following reactions?
Signup and view all the answers
The function of synthetases relates to which type of chemical reaction?
The function of synthetases relates to which type of chemical reaction?
Signup and view all the answers
What is typically the composition of simple enzymes?
What is typically the composition of simple enzymes?
Signup and view all the answers
What does the first digit of an enzyme's EC number represent?
What does the first digit of an enzyme's EC number represent?
Signup and view all the answers
Which of the following statements about apoenzymes is true?
Which of the following statements about apoenzymes is true?
Signup and view all the answers
Which class of enzymes is responsible for catalyzing oxidation-reduction reactions?
Which class of enzymes is responsible for catalyzing oxidation-reduction reactions?
Signup and view all the answers
What is the consequence of enzyme denaturation?
What is the consequence of enzyme denaturation?
Signup and view all the answers
Which of the following is NOT a major class of enzymes according to the IUBMB classification?
Which of the following is NOT a major class of enzymes according to the IUBMB classification?
Signup and view all the answers
What defines a conjugated enzyme?
What defines a conjugated enzyme?
Signup and view all the answers
What happens to enzymes when exposed to high temperatures?
What happens to enzymes when exposed to high temperatures?
Signup and view all the answers
What happens to enzyme activity when pH deviates from its optimum level?
What happens to enzyme activity when pH deviates from its optimum level?
Signup and view all the answers
At what pH does the digestive enzyme pepsin exhibit maximum activity?
At what pH does the digestive enzyme pepsin exhibit maximum activity?
Signup and view all the answers
Which statement accurately describes the relationship between enzyme concentration and reaction rate?
Which statement accurately describes the relationship between enzyme concentration and reaction rate?
Signup and view all the answers
What occurs when substrate concentration is increased while enzyme concentration remains constant?
What occurs when substrate concentration is increased while enzyme concentration remains constant?
Signup and view all the answers
How does temperature generally affect reaction rates of enzymes?
How does temperature generally affect reaction rates of enzymes?
Signup and view all the answers
What happens when all active sites of an enzyme are occupied?
What happens when all active sites of an enzyme are occupied?
Signup and view all the answers
Which of the following statements is true regarding enzyme behavior?
Which of the following statements is true regarding enzyme behavior?
Signup and view all the answers
What is the typical pH range within which most enzymes exhibit maximum activity?
What is the typical pH range within which most enzymes exhibit maximum activity?
Signup and view all the answers
What is formed when the substrate binds to an enzyme's active site?
What is formed when the substrate binds to an enzyme's active site?
Signup and view all the answers
Which model suggests that the active site of an enzyme is rigid and only fits specific substrates?
Which model suggests that the active site of an enzyme is rigid and only fits specific substrates?
Signup and view all the answers
What term describes the ability of an enzyme to catalyze reactions for only one specific substrate?
What term describes the ability of an enzyme to catalyze reactions for only one specific substrate?
Signup and view all the answers
What happens to an enzyme when the temperature exceeds its optimum level?
What happens to an enzyme when the temperature exceeds its optimum level?
Signup and view all the answers
What factor does NOT affect enzyme activity?
What factor does NOT affect enzyme activity?
Signup and view all the answers
Which type of specificity allows an enzyme to act on substrates with similar functional groups?
Which type of specificity allows an enzyme to act on substrates with similar functional groups?
Signup and view all the answers
Which amino acid property is crucial for determining the specificity of the substrate at the active site?
Which amino acid property is crucial for determining the specificity of the substrate at the active site?
Signup and view all the answers
Which of the following describes the enzyme's active site changing shape to better accommodate the substrate?
Which of the following describes the enzyme's active site changing shape to better accommodate the substrate?
Signup and view all the answers
What is the primary effect of a substrate concentration increase on enzyme activity, assuming other factors are constant?
What is the primary effect of a substrate concentration increase on enzyme activity, assuming other factors are constant?
Signup and view all the answers
Which type of specificity involves the enzyme acting on a particular type of chemical bond?
Which type of specificity involves the enzyme acting on a particular type of chemical bond?
Signup and view all the answers
What effect does an irreversible inhibitor have on an enzyme?
What effect does an irreversible inhibitor have on an enzyme?
Signup and view all the answers
How does a competitive inhibitor affect enzyme activity?
How does a competitive inhibitor affect enzyme activity?
Signup and view all the answers
What happens to enzymes when body temperature rises from 37ᵒC to 42ᵒC?
What happens to enzymes when body temperature rises from 37ᵒC to 42ᵒC?
Signup and view all the answers
What characteristic distinguishes non-competitive inhibitors from competitive inhibitors?
What characteristic distinguishes non-competitive inhibitors from competitive inhibitors?
Signup and view all the answers
What is the role of positive allosteric regulators?
What is the role of positive allosteric regulators?
Signup and view all the answers
Which statement best describes reversible competitive inhibition?
Which statement best describes reversible competitive inhibition?
Signup and view all the answers
Which of the following describes allosteric enzymes?
Which of the following describes allosteric enzymes?
Signup and view all the answers
What is a common characteristic of irreversible inhibitors?
What is a common characteristic of irreversible inhibitors?
Signup and view all the answers
Which of the following does not represent a type of enzyme inhibition?
Which of the following does not represent a type of enzyme inhibition?
Signup and view all the answers
What position does a non-competitive inhibitor bind to on the enzyme?
What position does a non-competitive inhibitor bind to on the enzyme?
Signup and view all the answers
Flashcards
Cofactor (Coenzyme)
Cofactor (Coenzyme)
A non-protein part of an enzyme that helps it function.
Apoenzyme
Apoenzyme
The protein part of an enzyme, without any cofactors attached.
Holoenzyme
Holoenzyme
A complete active enzyme, formed by the apoenzyme combined with its cofactor.
Coenzyme
Coenzyme
Signup and view all the flashcards
Simple Enzyme
Simple Enzyme
Signup and view all the flashcards
What are enzymes?
What are enzymes?
Signup and view all the flashcards
What are enzymes composed of?
What are enzymes composed of?
Signup and view all the flashcards
What is the structure of an enzyme?
What is the structure of an enzyme?
Signup and view all the flashcards
How are enzymes named?
How are enzymes named?
Signup and view all the flashcards
What is enzyme specificity?
What is enzyme specificity?
Signup and view all the flashcards
What are conjugated enzymes?
What are conjugated enzymes?
Signup and view all the flashcards
What is an apoenzyme?
What is an apoenzyme?
Signup and view all the flashcards
What are cofactors?
What are cofactors?
Signup and view all the flashcards
Hydrolases
Hydrolases
Signup and view all the flashcards
Lyases
Lyases
Signup and view all the flashcards
Isomerases
Isomerases
Signup and view all the flashcards
Ligases
Ligases
Signup and view all the flashcards
Hydrolysis
Hydrolysis
Signup and view all the flashcards
Optimum pH (pHOPT)
Optimum pH (pHOPT)
Signup and view all the flashcards
Enzyme Denaturation
Enzyme Denaturation
Signup and view all the flashcards
Enzyme Function
Enzyme Function
Signup and view all the flashcards
Saturation Point
Saturation Point
Signup and view all the flashcards
Enzyme Concentration and Reaction Rate
Enzyme Concentration and Reaction Rate
Signup and view all the flashcards
Enzyme Reusability
Enzyme Reusability
Signup and view all the flashcards
Active Site
Active Site
Signup and view all the flashcards
Substrate
Substrate
Signup and view all the flashcards
What is the active site of an enzyme?
What is the active site of an enzyme?
Signup and view all the flashcards
How is the active site formed?
How is the active site formed?
Signup and view all the flashcards
What is an enzyme-substrate complex?
What is an enzyme-substrate complex?
Signup and view all the flashcards
Explain the 'lock and key' model of enzyme action.
Explain the 'lock and key' model of enzyme action.
Signup and view all the flashcards
What is the 'induced fit' model of enzyme action?
What is the 'induced fit' model of enzyme action?
Signup and view all the flashcards
What type of specificity is most restrictive?
What type of specificity is most restrictive?
Signup and view all the flashcards
What is group specificity?
What is group specificity?
Signup and view all the flashcards
What is linkage specificity?
What is linkage specificity?
Signup and view all the flashcards
What is stereochemical specificity?
What is stereochemical specificity?
Signup and view all the flashcards
What happens to enzymes when body temperature increases?
What happens to enzymes when body temperature increases?
Signup and view all the flashcards
What happens to a chemical reaction if the enzyme is non-functional?
What happens to a chemical reaction if the enzyme is non-functional?
Signup and view all the flashcards
What is an enzyme inhibitor?
What is an enzyme inhibitor?
Signup and view all the flashcards
What is reversible competitive inhibition?
What is reversible competitive inhibition?
Signup and view all the flashcards
What is reversible non-competitive inhibition?
What is reversible non-competitive inhibition?
Signup and view all the flashcards
What is irreversible inhibition?
What is irreversible inhibition?
Signup and view all the flashcards
What are allosteric enzymes?
What are allosteric enzymes?
Signup and view all the flashcards
What is a positive allosteric regulator?
What is a positive allosteric regulator?
Signup and view all the flashcards
What is a negative allosteric regulator?
What is a negative allosteric regulator?
Signup and view all the flashcards
How does a positive allosteric regulator affect an enzyme's activity?
How does a positive allosteric regulator affect an enzyme's activity?
Signup and view all the flashcards
Study Notes
Biochemistry - Enzymes and Coenzymes
- The study covers enzymes and coenzymes, focusing on their characteristics, structure, nomenclature, function, specificity, activity factors, inhibition, regulation, medical uses, and active sites.
Session Plan
- General Characteristics of Enzymes
- Enzyme Structure
- Enzyme Nomenclature
- Enzyme Function
- Enzyme Specificity
- Factors Affecting Enzyme Activity
- Enzyme Inhibition
- Regulation of Enzyme Activity
- Medical Uses of Enzymes
General Characteristics of Enzymes
- Enzymes are typically proteins acting as catalysts in specific biochemical reactions within cells.
- Each human cell contains thousands of different enzymes.
- Each biochemical reaction within a cell needs a specific enzyme.
- Most enzymes are globular proteins, but some are composed of RNA, catalyzing reactions involving nucleic acids.
- Enzymes are proteins and undergo denaturation due to pH or temperature changes, which impact protein function in humans.
Enzyme Action
- Enzymes speed up reactions, lowering activation energy.
- Without enzymes, reactions often occur significantly slower.
- Reactants (e.g., glucose + O2) become products (e.g., CO2 + H2O).
Nomenclature/Enzyme Classification
- The International Union of Biochemistry and Molecular Biology (IUBMB) provides a standardized system for enzyme naming.
- Each enzyme is assigned a trivial name (common name) and a systematic name (official name), such as EC 3.2.1.1 (hexokinase).
Enzyme Code Number
- Each enzyme has a unique code number (EC number) with four digits separated by dots.
- The first digit determines the enzyme class.
- The second, third, and fourth digits give more detailed information about the reaction the enzyme performs.
Enzyme Classification
- Enzymes are grouped into six major classes based on the type of reaction they catalyze.
- These include oxidoreductases, transferases, hydrolases, lyases, isomerases, and ligases.
Enzyme Nomenclature: Type of Reaction
- The name of the enzyme often indicates the general type of reaction it catalyzes.
- For example, "oxidase" indicates a redox reaction, and "hydrolase" indicates a reaction involving water.
Enzyme Structure: Simple & Conjugated Enzymes
- Simple enzymes consist only of protein.
- Conjugated enzymes consist of a protein portion (apoenzyme) and a non-protein component (cofactor), which might be a metal ion or a coenzyme.
- The combination of both forms the whole, functional enzyme (holoenzyme).
Coenzymes and Cofactors
- Coenzymes are non-protein organic molecules derived from vitamins or vitamin derivatives that function as cofactors in conjugated enzymes.
- Metal ions also act as cofactors (e.g. Mg2+, Zn2+, Fe2+).
Enzyme Definitions
- Enzyme: A protein that catalyzes biochemical reactions.
- Coenzyme: A non-protein (often vitamin-derived) molecule that assists an enzyme.
- Cofactor: A non-protein molecule (including metal ions) that assists an enzyme.
- Apoenzyme: The protein portion of a conjugated enzyme.
- Holoenzyme: The complete, active enzyme (apoenzyme + cofactor).
Enzyme Nomenclature
- Enzyme names often indicate reaction type and substrate.
- A substrate is the reactant an enzyme acts upon.
- The enzyme binds to the substrate and catalyzes the reaction.
Enzyme Activity: Factors Affecting It
- Enzyme activity (rate at which an enzyme converts substrate to products) is affected by factors such as temperature, pH, substrate concentration, and enzyme concentration.
Enzyme Activity: Effect of Temperature
- Increased temperature generally increases enzyme activity, up to a certain optimal point (e.g., 37°C for human enzymes).
- Beyond this optimum, excessive heat denatures the enzyme, decreasing activity.
Enzyme Activity: Effect of pH
- Each enzyme's activity is influenced by pH.
- A narrow optimal pH range exists for each enzyme.
- Changes outside this range hinder enzyme function due to denaturation.
Enzyme Specificity
- Enzymes exhibit various specificity levels.
- Absolute specificity: An enzyme catalyzes only one specific reaction.
- Group specificity: An enzyme catalyzes reactions on similar substrates.
- Linkage specificity: An enzyme acts upon a specific chemical bond regardless of the larger substrate molecule,
- Stereochemical Specificity: An enzyme distinguishes between stereoisomers, such as L- and D-amino acids
Enzyme Active Sites
- The active site is the region on an enzyme where the substrate binds.
- It's a crevice-like cavity in the enzyme's tertiary structure.
- Specific amino acid side chains in the active site interact with the substrate.
Enzyme-Substrate Complex
- When the substrate binds to the active site, an enzyme-substrate complex forms.
- This complex facilitates the chemical reaction, converting the substrate to product/s, much more rapidly than in the absence of an enzyme.
Lock and Key Model
- In the lock-and-key model, the active site has a rigid shape, and the substrate must fit perfectly.
- This model is not completely accurate, as it does not account for flexibility and induced shape changes.
Induced Fit Model
- The induced-fit model suggests that the active site changes shape upon substrate binding to better accommodate the substrate in the complex, and thus optimize the reaction.
Enzyme Inhibition
- Enzyme inhibition is the interruption of an enzyme's catalytic activity.
- Inhibitors reduce enzyme activity either reversibly or irreversibly.
Enzyme Inhibition Types
- Competitive inhibition: The inhibitor structurally resembles the substrate and competes for binding to the active site.
- Noncompetitive inhibition: The inhibitor binds to an enzyme site other than the active site, changing the enzyme's conformation, and preventing the substrate from binding.
- Irreversible inhibition: The inhibitor forms a covalent bond with the enzyme, permanently inactivating it.
Allosteric Enzymes
- Allosteric enzymes possess more than one binding site; one for the substrate and one for allosteric regulators.
- Binding of regulators alters the enzyme's three-dimensional structure, impacting its active site's ability to bind to the substrate.
- Positive allosteric regulators enhance enzyme activity, while negative allosteric regulators decrease activity.
Substrate Concentration: Effect on Reaction Rate
- At low substrate concentrations, the reaction rate increases linearly with substrate concentration.
- At high substrate concentrations, the reaction rate reaches a maximum, where all active sites are occupied.
Enzyme Concentration: Effect on Reaction Rate
- Increasing enzyme concentration increases the reaction rate, as more enzymes are available to catalyze the reaction.
Studying That Suits You
Use AI to generate personalized quizzes and flashcards to suit your learning preferences.
Related Documents
Description
Test your knowledge on enzyme structure, function, and classification through this comprehensive quiz. Explore topics such as apoenzymes, coenzymes, enzyme classes, and their roles in biochemical reactions. This quiz is designed for students studying biochemistry or related fields.