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Questions and Answers
What was the purpose of spinning the solution in a CsCl density gradient?
What was the purpose of spinning the solution in a CsCl density gradient?
What type of DNA was confirmed to be produced through semi-conservative replication?
What type of DNA was confirmed to be produced through semi-conservative replication?
Which factors are required for the in vitro replication of DNA as discovered by Arthur Kornberg?
Which factors are required for the in vitro replication of DNA as discovered by Arthur Kornberg?
What is the primary direction of new DNA strand synthesis mediated by polymerases?
What is the primary direction of new DNA strand synthesis mediated by polymerases?
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Which enzyme is essential for DNA replication in E. coli?
Which enzyme is essential for DNA replication in E. coli?
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What additional activities does Pol I possess apart from 5' to 3' DNA polymerizing?
What additional activities does Pol I possess apart from 5' to 3' DNA polymerizing?
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What was the conclusion regarding the forms of DNA visible after one generation in the experiment?
What was the conclusion regarding the forms of DNA visible after one generation in the experiment?
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Which of the following was NOT a condition needed for DNA replication as identified by Kornberg?
Which of the following was NOT a condition needed for DNA replication as identified by Kornberg?
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Who discovered Pol III, the enzyme essential for DNA replication in E. coli?
Who discovered Pol III, the enzyme essential for DNA replication in E. coli?
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What mechanism describes how DNA replication results in each daughter DNA molecule containing one parental strand?
What mechanism describes how DNA replication results in each daughter DNA molecule containing one parental strand?
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Which process helps to compact E. coli DNA into its small cell size?
Which process helps to compact E. coli DNA into its small cell size?
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What is the primary role of nucleoid-associated proteins in E. coli?
What is the primary role of nucleoid-associated proteins in E. coli?
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What type of base pairing occurs between adenine and thymine during DNA structure formation?
What type of base pairing occurs between adenine and thymine during DNA structure formation?
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What is the outcome of Meselson and Stahl's experiments on DNA replication?
What is the outcome of Meselson and Stahl's experiments on DNA replication?
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How long is the total DNA length in a human somatic cell?
How long is the total DNA length in a human somatic cell?
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Which of the following statements about DNA replication error rates is true?
Which of the following statements about DNA replication error rates is true?
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What experimental technique did Meselson and Stahl use to differentiate between DNA replication models?
What experimental technique did Meselson and Stahl use to differentiate between DNA replication models?
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What is the approximate size of the human genome in base pairs?
What is the approximate size of the human genome in base pairs?
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Which model of DNA replication suggests that both parental strands remain intact?
Which model of DNA replication suggests that both parental strands remain intact?
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Which process helps compact DNA in E. coli?
Which process helps compact DNA in E. coli?
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What model of DNA replication did Watson and Crick propose?
What model of DNA replication did Watson and Crick propose?
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What technique did Meselson and Stahl use to test their DNA replication model?
What technique did Meselson and Stahl use to test their DNA replication model?
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What is the primary function of DNA polymerases?
What is the primary function of DNA polymerases?
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What is required for DNA polymerase to synthesize new DNA?
What is required for DNA polymerase to synthesize new DNA?
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Which enzyme is essential for DNA replication in E. coli?
Which enzyme is essential for DNA replication in E. coli?
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What characteristic of DNA replication was demonstrated by the Watson-Crick model?
What characteristic of DNA replication was demonstrated by the Watson-Crick model?
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Which model of DNA replication was confirmed by Meselson and Stahl’s experiment?
Which model of DNA replication was confirmed by Meselson and Stahl’s experiment?
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Study Notes
DNA Replication
- DNA is organised in a circular, double-stranded structure
- Bacterial DNA (e.g., Escherichia coli) has a size of 4639 kb
- Base pairs are spaced 0.34 nm apart
- Total DNA length in E. coli is 1.6 mm
- Bacterial cell size is 1-2 μm
- DNA compaction mechanisms include supercoiling and nucleoid-associated proteins
- Supercoiling reduces size by twisting the DNA
- Nucleoid-associated proteins help compact DNA within the bacterial cell
- Human DNA has a genome size of 6.4 Gbp and a total length of ~2.2 m per cell.
Compaction Mechanics
- Nucleus size is approximately 6 μm in diameter.
- DNA compaction occurs through nucleosomes and chromatin fibres.
- Eukaryotic DNA is packed more densely than E. coli DNA.
- DNA length in humans is sufficient to stretch to the Sun and back approximately 730 times.
DNA Replication Mechanisms
- DNA must decompact and be copied during cell division
- Error rate during replication is very low
- Watson-Crick model: DNA strands can act as templates to build complementary strands, resulting in identical daughter molecules
- Watson-Crick model proposes that base pairing (A-T, G-C) holds the strands together.
- Each strand is complementary to the other, therefore, each can act as a template for DNA replication.
Testing Models of DNA Replication
- Meselson and Stahl (1958) used caesium chloride (CsCl) equilibrium density gradient centrifugation to test DNA replication models
- The technique separates molecules based on density.
- Using isotopes, they tracked DNA replication to determine whether replication was conservative, semi-conservative or dispersive.
- The results confirmed semi-conservative replication, meaning each new DNA molecule consisted of one original strand and one newly synthesized strand.
DNA Polymerases
- DNA polymerase enzymes are responsible for DNA replication
- DNA polymerase I can synthesize DNA and has editing and error correction functions
- It possesses 5' to 3' polymerase, 3' to 5' exonuclease, and 5' to 3' exonuclease activities.
- DNA polymerase III is essential for DNA replication in E. coli.
- New DNA strands are extended in a 5' to 3' direction by DNA polymerase.
- DNA polymerase has two active sites: one for polymerization and one for editing.
- The editing site is the 3' to 5' exonuclease active site.
DNA Replication Polarity
- The DNA strands run anti-parallel (5' to 3' and 3' to 5')
- DNA replication is semi-continuous (one leading and one lagging strand.)
- New DNA is made in the 5’ → 3’ direction
- Priming is required for replication, with the primers extended in 5’ → 3’ direction.
- Lagging strand requires new priming and extension because DNA synthesis occurs in the opposite direction.
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Description
This quiz covers the fundamental concepts of DNA replication, including the structure and compaction mechanisms in both bacterial and eukaryotic cells. Explore the differences in DNA organization, size, and replication processes. Challenge your understanding of key terms and models in genetics.