Biopharmaceuticals and Cell Growth Media
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Questions and Answers

What are primary metabolites, and why are they essential during the growth phase of cells?

Primary metabolites are essential compounds such as amino acids and vitamins synthesized by cells during their growth phase, crucial for their growth and development.

List two examples each of sugars and vitamins that are commonly used in growth media for mammalian cells.

Examples of sugars include glucose and lactose; examples of vitamins include ascorbic acid and thiamine.

Describe the lag phase of bacterial growth during fermentation.

The lag phase is when bacteria do not divide but adapt to the growth conditions in the medium, preparing for subsequent growth.

What occurs during the stationary phase of bacterial growth?

<p>During the stationary phase, active cell growth slows due to nutrient depletion and medium spoilage, leading to stable cell numbers.</p> Signup and view all the answers

Identify the trace minerals necessary for mammalian cell growth, and explain their role.

<p>Essential trace minerals include iron, copper, cobalt, and magnesium, which play vital roles in enzyme function and cellular metabolism.</p> Signup and view all the answers

What is the primary source for the production of biopharmaceutical products as of 2010?

<p>Mammalian cells.</p> Signup and view all the answers

Identify the three classifications of bioreactor systems based on capacity.

<p>Laboratory (&lt; 50 L), Experimental (50 – 50,000 L), Industrial (&gt; 50,000 L).</p> Signup and view all the answers

How long do cultured cells remain in bioreactors during continuous processes?

<p>90 days.</p> Signup and view all the answers

What happens to the reactor after the biochemical conversions in batch processes?

<p>The tank is emptied and the end products are purified.</p> Signup and view all the answers

What is the purpose of the starting material and cells in bioreactors?

<p>They are used for biochemical conversions to produce therapeutic recombinant proteins.</p> Signup and view all the answers

What percentage of the 58 biopharmaceutical products were produced in E. coli from 2006 to 2010?

<p>Approximately 29% (17 out of 58).</p> Signup and view all the answers

Which type of bioreactor system is used for small-scale experimentation?

<p>Laboratory bioreactor.</p> Signup and view all the answers

In large-scale manufacturing, what is the role of fermenters?

<p>Fermenters facilitate the cultivation of cells for producing therapeutic recombinant proteins.</p> Signup and view all the answers

What type of bioreactor system is defined by a capacity greater than 50,000 L?

<p>Industrial bioreactor.</p> Signup and view all the answers

What is the significance of having fermentation or bioreactor processes in biotechnology?

<p>They are essential for the large-scale production of biologics and therapeutic proteins.</p> Signup and view all the answers

What is biotechnology and how does it utilize living organisms for production processes?

<p>Biotechnology is a multidisciplinary field that integrates natural and engineering sciences to apply organisms for product and service creation through processes involving living organisms like bacteria and yeast.</p> Signup and view all the answers

Explain the role of genetic engineering in modifying organisms and provide an example.

<p>Genetic engineering involves altering the genetic makeup of organisms by inserting genes from one into another to achieve desired traits; for instance, creating bacteria that produce human insulin.</p> Signup and view all the answers

What are recombinant proteins and why are they significant in biotechnology?

<p>Recombinant proteins are artificially produced using genetic engineering techniques, and they are significant in biotechnology for their use in research and as drugs for treating diseases.</p> Signup and view all the answers

Describe the process through which recombinant proteins are produced using a common bacterium.

<p>The process involves inserting a human gene into the genetic material of a bacterium, which then utilizes this genetic information to produce the encoded protein.</p> Signup and view all the answers

When was the first recombinant protein used in treatment and what was it?

<p>The first recombinant protein used in treatment was recombinant human insulin, introduced in 1982.</p> Signup and view all the answers

What impact has the recombinant protein industry had since its inception?

<p>The recombinant protein industry has rapidly grown, with over 130 recombinant proteins approved by the US FDA for clinical use to date.</p> Signup and view all the answers

Identify two applications of biotechnology in the production of valuable substances.

<p>Biotechnology is used to produce vaccines and enzymes through the use of engineered organisms.</p> Signup and view all the answers

What are some drawbacks of using animal sources for protein pharmaceuticals?

<p>Variability in amino acid sequences, limited production quantities, low purity, and potential immunological reactions.</p> Signup and view all the answers

List the first two steps involved in recombinant protein production.

<p>Isolating the gene and vector, and combining the gene with the vector.</p> Signup and view all the answers

What is the significance of integrating the recombinant vector into the host cell?

<p>It allows for the expression of the desired protein within the host organism.</p> Signup and view all the answers

Identify one potential contaminant that may need to be removed in downstream processing.

<p>Endotoxins or residual host cell proteins.</p> Signup and view all the answers

Why is the choice of expression systems important in biotechnology?

<p>Different expression systems can affect yield, post-translational modifications, and overall protein functionality.</p> Signup and view all the answers

What type of cultivation system is typically used for large-scale recombinant protein production?

<p>Bioreactors.</p> Signup and view all the answers

What role does the culture medium play in recombinant protein production?

<p>It provides essential nutrients for the host cells to grow and produce proteins.</p> Signup and view all the answers

What is downstream processing in biotechnology?

<p>The purification and recovery of biological products after fermentation or cell culture.</p> Signup and view all the answers

What is one of the major benefits of recombinant protein production compared to traditional methods?

<p>Recombinant production allows for larger quantities of proteins with high purity levels.</p> Signup and view all the answers

What is the doubling time of E. coli under optimal conditions?

<p>About 20 minutes.</p> Signup and view all the answers

List one significant advantage of using mammalian cells in biotechnology.

<p>They provide post-translational modifications like glycosylation.</p> Signup and view all the answers

Name one limitation of using mammalian expression systems in industrial applications.

<p>They are highly expensive.</p> Signup and view all the answers

What type of host organism is E. coli classified as?

<p>Prokaryotic cells.</p> Signup and view all the answers

What does 'scalability' refer to in the context of mammalian cell use in biotechnology?

<p>The ability to produce proteins in both small or large-scale processes.</p> Signup and view all the answers

Identify the most commonly used host cell line for therapeutic protein production.

<p>Chinese Hamster Ovary (CHO) cells.</p> Signup and view all the answers

Explain one reason why rich complex media are advantageous for E. coli cultivation.

<p>They can be made from inexpensive and readily available components.</p> Signup and view all the answers

What is the main advantage of plasmid transformation in E. coli?

<p>It can be performed in as little as 5 minutes.</p> Signup and view all the answers

Why might potential contamination with animal viruses be a concern in mammalian expression systems?

<p>It can affect the safety and efficacy of therapeutic products.</p> Signup and view all the answers

Mention one reason why proteins produced in mammalian cells are preferred in human applications.

<p>They are more likely to be bioactive and functional in humans.</p> Signup and view all the answers

Flashcards

What is Biotechnology?

A field that combines natural and engineering sciences to use living organisms for products and services. It involves using bacteria, yeast, etc., to perform specific tasks or create valuable substances.

What is Genetic Engineering?

Modifying the genetic makeup of organisms (like adding genes) to create new traits or change existing ones.

What are Recombinant Proteins?

Proteins artificially produced using genetic engineering techniques. They are used in research and as drugs.

How are Recombinant Proteins produced?

Scientists insert a human gene into a common bacterium. The bacterium then produces the protein encoded by the human gene.

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What was the first recombinant protein used in treatment?

Recombinant human insulin, approved in 1982.

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How many recombinant proteins are approved by the US FDA?

Over 130 recombinant proteins are approved for clinical use.

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What is the significance of recombinant proteins in biotechnology?

Recombinant proteins have revolutionized the field of biomedical biotechnology, used in research and as drugs for a range of diseases.

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What are primary metabolites?

Essential substances synthesized by cells during their active growth phase. They are crucial for the cell's survival and development, examples include amino acids and vitamins.

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What is the 'Log Phase' in cell growth?

The phase where cells multiply rapidly, and their genes are most active. This is also called the exponential growth phase.

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What happens during the 'Stationary Phase' of bacterial growth?

Cell growth slows down as resources become scarce and waste products accumulate in the environment.

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What factors are necessary for mammalian cell growth?

Mammalian cells require various nutrients for growth, including sugars (for energy), fatty acids, water, amino acids, electrolytes (for osmotic balance), vitamins, essential proteins, trace minerals, and hormones.

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What is the 'Death Phase' in bacterial growth?

The final stage where bacterial cells die off due to lack of resources and accumulation of toxic byproducts.

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Prokaryotic Host Cells

Single-celled organisms lacking a nucleus and membrane-bound organelles, like bacteria. They are often used as host cells in biotechnology due to their rapid growth and ease of manipulation.

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Eukaryotic Host Cells

Organisms with complex cells containing a nucleus and membrane-bound organelles, like yeast and fungi. They are often used as host cells in biotechnology due to their ability to perform more complex biological processes.

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E. coli Advantages

E.coli is commonly used as a host cell in biotechnology due to its rapid growth rate, ability to be easily manipulated, and relatively low cost of culture.

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Mammalian Cell Advantages

Mammalian cells are used in biotechnology because they can correctly modify proteins, making them more biologically relevant and useful.

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Mammalian Cell Disadvantages

Mammalian cells are often difficult to cultivate, expensive to maintain, and carry a risk of contamination.

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CHO Cells

Chinese Hamster Ovary (CHO) cells are the most commonly used mammalian cell line in biotechnology. They are known for their ability to reliably produce a variety of therapeutic proteins.

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Post-Translational Modification

The process of modifying a protein after it is synthesized. This can involve adding sugars, phosphates, or other molecules to the protein.

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Glycosylation

A type of post-translational modification where sugars are added to a protein. This modification is important for protein stability, function, and recognition.

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Phosphorylation

A type of post-translational modification where a phosphate group is added to a protein. This modification can activate or deactivate the protein.

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Protein Folding

The process by which a protein takes on its correct three-dimensional structure. This structure is essential for the protein's function.

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What are bioreactors?

Large tanks used for cultivating cells to produce therapeutic proteins or other valuable substances.

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How are bioreactors classified by size?

Bioreactors are classified into three sizes:

  1. Laboratory (< 50 L)
  2. Experimental (50 – 50,000 L)
  3. Industrial (> 50,000 L)
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What are the three main types of bioreactor processes?

  1. Batch processes: Cells are grown in a closed system for a short time, then the product is extracted.
  2. Continuous processes: Fresh medium is constantly added, and product is continuously removed.
  3. Fed-batch processes: Cells are cultured for a longer period, with fresh medium added periodically.
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What are batch processes like?

Cells are grown in a closed system for a few hours to days. Fresh medium is added at the beginning. The reactor is emptied after the process, and the products are purified.

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What are continuous processes like?

Fresh medium is constantly added to the reactor, and the product is continuously removed. Cells remain in the reactor constantly.

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What are fed-batch processes like?

Cells are cultured for extended periods (up to 90 days). Fresh medium is added regularly, but the reactor isn't fully emptied.

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What are mammalian cells used for in biotechnology?

Mammalian cells are widely used to produce therapeutic proteins, such as antibodies and hormones.

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Why are mammalian cells preferred for protein production?

They are capable of producing complex proteins with post-translational modifications.

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What are some other types of cells used for protein production?

Other types of cells used include bacteria (E.coli), yeast, insect cells, and even transgenic animals.

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What is the current trend in biotechnological protein production?

Mammalian cell production dominates the current biotechnology industry, with over half of new biopharmaceuticals produced in these cells.

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Why were proteins obtained from animal sources before genetic engineering?

Before the advent of genetic engineering, proteins like hormones were primarily sourced from animals (cows, pigs). This was due to the lack of efficient methods to produce them synthetically. However, this method had several drawbacks, such as potential differences in amino acid sequence compared to human proteins, difficulty in obtaining large quantities, purity issues, and the risk of immune reactions in humans.

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What are the key steps in recombinant protein production?

Recombinant protein production involves several crucial steps: 1) Isolating the gene of interest and a suitable vector (often a bacterial plasmid). 2) Combining the gene and vector. 3) Integrating the recombinant vector into a host cell (e.g., bacteria). 4) Growing the host cell in a culture medium. 5) Extracting the protein from the host.

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What are the factors considered for large-scale protein production?

Large-scale production of biotechnology products, especially pharmaceuticals, involves optimizing several aspects: 1) Selecting suitable expression systems (e.g., bacteria, yeast, mammalian cells). 2) Developing appropriate cultivation systems (e.g., bioreactors, growth conditions). 3) Defining the ideal medium for cell growth. 4) Controlling potential contaminants. 5) Implementing robust downstream processing to purify and recover the desired product.

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Why is it important to select the right expression system?

The choice of expression system is crucial because different organisms have different characteristics that affect protein production: 1) Bacteria (e.g., E.coli) grow quickly and are easy to manipulate, but may not always fold proteins correctly. 2) Mammalian cells often produce proteins with correct post-translational modifications, but are more complex to cultivate. 3) Yeast and insect cells offer compromises between these two extremes. Choosing the right expression system depends on the specific protein and the desired outcome.

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What is 'downstream processing' in recombinant protein production?

Downstream processing is the final stage of protein production, focusing on purifying and recovering the desired protein from the culture medium. This involves a series of steps like cell separation, chromatography (to separate proteins by size or charge), filtration, and other methods to achieve the required purity for therapeutic applications.

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What are the benefits of using recombinant proteins?

Recombinant proteins offer numerous advantages over traditional protein sources: 1) They can be produced in large quantities, overcoming limitations of animal sources. 2) They are often highly pure, eliminating the risk of contaminants from animal products. 3) They can be designed with specific modifications for improved efficacy or stability. 4) Recombinant proteins are generally safer than animal-derived proteins, reducing the risk of allergic reactions or disease transmission.

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What is the significance of 'post-translational modifications' in recombinant protein production?

Post-translational modifications are crucial because they can significantly affect the function, stability, and targeting of a protein. These modifications, like adding sugar molecules (glycosylation) or phosphate groups (phosphorylation), are often necessary for proper protein folding and activity. Mammalian cells are particularly adept at performing these modifications, which is why they are often preferred for producing therapeutic proteins.

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What is the role of a bioreactor in recombinant protein production?

Bioreactors are large vessels used to cultivate cells on a large-scale for producing proteins. They create a controlled environment with optimized conditions for cell growth and protein production. Bioreactors come in different sizes, from laboratory scales to industrial-scale production, and different types, such as batch, fed-batch, and continuous reactors.

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Why are mammalian cells often preferred for producing therapeutic proteins?

While bacteria and other organisms are used for protein production, mammalian cells are often favored for producing therapeutic proteins. This is because mammalian cells have the ability to perform complex post-translational modifications, such as glycosylation and phosphorylation, which are essential for proper protein folding, function, and stability. These modifications often lead to proteins that are more biologically relevant and effective in treating human diseases.

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Study Notes

Course Information

  • Course title: Biochemistry and Biotechnology Fundamentals, Industrial Processes in Biotechnology
  • Course code: 1120-111
  • Instructor: Dr. Ahmed Hemdan
  • Department: Pharmaceutical Chemistry

Biotechnology

  • Multidisciplinary field integrating natural sciences and engineering
  • Organisms used to create products and services (genetic engineering)
  • Involves producing valuable substances from raw materials using living organisms (bacteria, yeast)

Recombinant Proteins

  • Artificially produced using genetic engineering
  • Key role in biomedical biotechnology
  • Used in research and as drugs for various diseases
  • Produced by inserting a human gene into a bacterium
  • Recombinant human insulin was the first such protein used in treatment in 1982
  • Over 130 recombinant proteins are currently FDA-approved for clinical use
  • Recombinant proteins used clinically include hormones, interferons, interleukins, growth factors, etc., for treating diabetes, dwarfism, and other diseases.

Plasmids

  • Small, circular DNA molecules
  • Found in bacteria and other microorganisms
  • Physically distinct from chromosomal DNA
  • Replicate independently

Genes

  • Specific DNA sequences
  • Contain information to code for functional products (usually proteins or RNA molecules)
  • Human protein-coding genes vary widely in length from a few hundred to millions of bases
  • Shortest genes are tRNA genes (70-90 nucleotides)
  • Human insulin gene (INS) is a relatively small gene with 1,425 base pairs.

Protein Pharmaceuticals from Animal Sources

  • Previously, protein pharmaceuticals/hormones were derived from animals (e.g., bovine or porcine)
  • Potential drawbacks include: not having the exact same amino acid sequence as in humans; difficulty obtaining large quantities; limited purity, and immunological reactions.

Recombinant Protein Production Steps

  • 1. Isolate the gene and vector (e.g., bacterial plasmid)
  • 2. Combine the gene and vector
  • 3. Integrate the recombinant vector into host cells
  • 4. Grow the cells in a culture medium
  • 5. Extract the protein

Large-Scale Production of Biotechnology Products (Pharmaceuticals)

  • Expression Systems: (choosing the appropriate organism eg. Bacteria, Yeast, Filamentous fungi, Mammalian cells, and Unicellular algae).
  • Cultivation Systems: Large tanks also known as fermenters or bioreactors.
    • Includes Laboratory-scale systems (<50L)
    • Experimental systems (50-50,000L)
    • Industrial systems (>50,000L)
  • Medium of cultivation: The liquid mixture of nutrients and salts for cells to grow.
  • Removal of Potential Contaminants: Crucial for product purity
  • Downstream Processing: Purification and recovery of biological products.

Three Bioreactor Processes

  • Discontinuous/Batch Process: Material added to tank and processes till completion, then tank emptied and product purified
  • Continuous Process: Continuous supply of raw materials, while equivalent amount of the reaction mixture containing the end product is taken out
  • Semi-continuous Process: Cells remain in the reactor for a fixed period and are supplied with fresh medium and starting material regularly

Cultivation Systems (Mammalian Cells) - Components of Growth Medium

  • Sugars: Glucose, lactose, sucrose, and maltose
  • Fats: Fatty acids and triglycerides
  • Water: Sterile water (high quality)
  • Amino acids: Glutamine
  • Electrolytes: Calcium, sodium, potassium, and phosphate
  • Vitamins: Ascorbic acid, tocopherol, thiamine, riboflavin, and folic acid
  • Fetal Calf Serum: proteins, albumin, transferrin
  • Trace Minerals: Iron, copper, cobalt, and magnesium
  • Hormones: Growth factors

Cultivation Systems (Bacteria) - Phases of Growth

  • Lag Phase: Cells adapt to the medium; no cell division
  • Log Phase: Rapid cell growth and gene expression
  • Stationary Phase: Cell growth slows; cell division and death rates are approximately equal.
  • Death Phase/Decline Phase: Nutrient depletion and waste accumulation leads to cell death.

Primary Metabolites

  • Synthesized during the growth phase
  • Essential for growth (e.g., amino acids, vitamins)
  • Amount increases as long as cells are proliferating

Secondary Metabolites

  • Produced at late stages of cell life cycle
  • Important for various applications, including antibiotics and toxins (but need conditions to be optimal)

Optimization of Recombinant Protein Production

  • Reduce lag phase duration
  • Delay stationary phase onset
  • Control culture medium pH
  • Effective control of oxygen and temperature
  • Strict sterile measures and work protocols

Potential Contaminants in Cultivation Process

  • Viral contaminants: Removed by chromatography, inactivation (heat or neutralization).
  • Bacterial contaminants: Removed by chromatography.
  • Cellular DNA contaminants: Removed.
  • Foreign protein contaminants: These pose health risks through immune reactions.

Therapeutic Proteins produced by Recombinant Protein Technology-Criteria

  • Ease of large-scale production and purification.
  • Absence of peptides and other contaminants.
  • Potentially fewer immune reactions.
  • Meeting regulatory standards.

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Description

This quiz explores essential concepts related to biopharmaceutical production, including primary metabolites and their role in cell growth. It also delves into the phases of bacterial growth during fermentation and the importance of trace minerals in mammalian cell culture. Test your understanding of bioreactor systems and the biopharmaceutical products derived from E. coli.

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