Biomolecules: Proteins Fundamentals Quiz
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Questions and Answers

What type of interactions occur between nonpolar R groups in proteins?

  • Van der Waals interactions
  • Ionic interactions
  • Covalent interactions
  • Hydrophobic interactions (weak interactions) (correct)
  • What are Van der Waals interactions?

  • Strong covalent bonds
  • Weak electric forces between neutral molecules (correct)
  • Hydrogen bonds
  • Ionic bonds
  • Which type of bond is the strongest interaction in proteins?

  • Hydrogen bonds
  • Van der Waals interactions
  • Ionic bonds
  • Covalent bonds (specifically disulfide bonds) (correct)
  • How do disulfide bridges form in proteins?

    <p>Between two cysteine monomers</p> Signup and view all the answers

    What does the tertiary structure of a protein refer to?

    <p>The three-dimensional arrangement of a single polypeptide chain</p> Signup and view all the answers

    What does quaternary structure of a protein refer to?

    <p>The arrangement of multiple polypeptide chains in a protein</p> Signup and view all the answers

    How do proteins fold and adopt their functional conformation in vitro?

    <p>Spontaneously</p> Signup and view all the answers

    How are proteins assisted in folding in vivo?

    <p>By molecular chaperones, which bind to exposed and unfolded regions</p> Signup and view all the answers

    What is the cause of sickle cell anemia?

    <p>A single point mutation resulting in a change in the amino acid sequence and the formation of sickle-shaped red blood cells</p> Signup and view all the answers

    What does denaturation refer to?

    <p>Loss of a protein's three-dimensional structure and biological activity</p> Signup and view all the answers

    What determines the polarity and charge of an amino acid?

    <p>The side chains (R groups)</p> Signup and view all the answers

    Which type of side chain makes an amino acid hydrophilic?

    <p>Functional groups like alcohols and amines</p> Signup and view all the answers

    How many amino acids are commonly found in proteins?

    <p>20</p> Signup and view all the answers

    What is the primary structure of a protein?

    <p>Sequence of amino acids joined by peptide bonds</p> Signup and view all the answers

    What type of bonding plays a crucial role in protein structure and function?

    <p>$ ext{Hydrogen bonding}$</p> Signup and view all the answers

    Which level of protein organization is determined by interactions among R groups?

    <p>Tertiary structure</p> Signup and view all the answers

    What is the secondary structure formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain?

    <p>Alpha helices and beta pleated sheets</p> Signup and view all the answers

    In which protein structure do alpha helices form a spiral structure?

    <p>Secondary structure</p> Signup and view all the answers

    What do beta pleated sheets have hydrogen bonding between?

    <p>Different polypeptide chains or regions of the same chain that have turned back on themselves</p> Signup and view all the answers

    What allows proteins to have a combination of both alpha helices and beta pleated sheets in their structure?

    <p>Tertiary structure</p> Signup and view all the answers

    What are proteins composed of?

    <p>Amino acids</p> Signup and view all the answers

    How many different proteins are there in the human body?

    <p>Approximately 100,000</p> Signup and view all the answers

    What is the role of most enzymes in the body?

    <p>Catalyzing metabolic processes</p> Signup and view all the answers

    What gives each amino acid its unique characteristics and identity?

    <p>Distinctive side chain or R group</p> Signup and view all the answers

    Which type of bond is characteristic of proteins?

    <p>$\beta$-peptide bond</p> Signup and view all the answers

    What is the fundamental structure that all amino acids share?

    <p>Central Carbon and Hydrogen</p> Signup and view all the answers

    What determines the unique characteristics and identity of each amino acid?

    <p>A distinctive side chain or R group</p> Signup and view all the answers

    What type of bond is hydrogen bonding in proteins?

    <p>Non-covalent bond</p> Signup and view all the answers

    In which protein structure do beta pleated sheets have hydrogen bonding between?

    <p>Different polypeptide chains</p> Signup and view all the answers

    What determines the three-dimensional shape of an individual polypeptide chain in proteins?

    <p>Secondary structure</p> Signup and view all the answers

    What type of side chains make amino acids hydrophobic?

    <p>Non-polar side chains</p> Signup and view all the answers

    What are proteins made up of?

    <p>$\alpha$-amino acids and peptide bonds</p> Signup and view all the answers

    What is the role of hydrogen bonding in protein structure and function?

    <p>Stabilizing the protein structure</p> Signup and view all the answers

    How many amino acids are commonly found in proteins?

    <p>20</p> Signup and view all the answers

    What determines the polarity and charge of an amino acid?

    <p>Side chains (R groups)</p> Signup and view all the answers

    What type of bond is characteristic of proteins?

    <p>Hydrogen bond</p> Signup and view all the answers

    What is the role of molecular chaperones in protein synthesis?

    <p>Assisting in the folding of newly synthesized proteins to their functional conformation</p> Signup and view all the answers

    What is the primary function of most enzymes in the body?

    <p>Catalyzing metabolic processes</p> Signup and view all the answers

    What determines the unique characteristics and identity of each amino acid?

    <p>Distinctive side chain or R group</p> Signup and view all the answers

    What is the quaternary structure of a protein?

    <p>Arrangement of multiple folded protein subunits into a functional macromolecule</p> Signup and view all the answers

    What type of bonding plays a crucial role in stabilizing the secondary structure of proteins?

    <p>Hydrogen bonds between amino acids in a polypeptide chain</p> Signup and view all the answers

    What allows proteins to have a combination of both alpha helices and beta pleated sheets in their structure?

    <p>Variations in the sequence and arrangement of amino acids within the polypeptide chain</p> Signup and view all the answers

    What is denaturation in the context of proteins?

    <p>Disruption of a protein's native conformation due to changes in pH or temperature</p> Signup and view all the answers

    How do disulfide bridges form in proteins?

    <p>Oxidative coupling between two cysteine residues</p> Signup and view all the answers

    What does the tertiary structure of a protein refer to?

    <p>Three-dimensional arrangement of all atoms in a single polypeptide chain</p> Signup and view all the answers

    What are molecular chaperones responsible for during protein synthesis?

    <p>Assisting in correct folding and preventing misfolding or aggregation</p> Signup and view all the answers

    What type of interactions occur between nonpolar R groups in proteins?

    <p>Hydrophobic interactions</p> Signup and view all the answers

    Which type of bond is the strongest interaction in proteins?

    <p>Disulfide bond</p> Signup and view all the answers

    What is the primary cause of sickle cell anemia?

    <p>Point mutation</p> Signup and view all the answers

    In which protein structure do alpha helices form a spiral structure?

    <p>Secondary structure</p> Signup and view all the answers

    What do beta pleated sheets have hydrogen bonding between?

    <p>Carbonyl groups in the polypeptide backbone</p> Signup and view all the answers

    How are proteins assisted in folding in vivo?

    <p>By chaperone proteins</p> Signup and view all the answers

    What type of interactions occur between nonpolar R groups in proteins?

    <p>Van der Waals interactions</p> Signup and view all the answers

    Which type of bond is characteristic of proteins?

    <p>Covalent bonding</p> Signup and view all the answers

    What is the quaternary structure of a protein?

    <p>The arrangement of multiple polypeptide chains in a protein</p> Signup and view all the answers

    How are proteins assisted in folding in vivo?

    <p>By molecular chaperones binding to exposed and unfolded regions</p> Signup and view all the answers

    What is denaturation in the context of proteins?

    <p>Loss of three-dimensional structure and biological activity</p> Signup and view all the answers

    What determines the unique characteristics and identity of each amino acid?

    <p>Side chain properties</p> Signup and view all the answers

    What is the primary function of most enzymes in the body?

    <p>Biological catalysis</p> Signup and view all the answers

    What allows proteins to have a combination of both alpha helices and beta pleated sheets in their structure?

    <p>Side chain interactions</p> Signup and view all the answers

    What type of bond is hydrogen bonding in proteins?

    <p>Characteristic of tertiary structure</p> Signup and view all the answers

    What gives each amino acid its unique characteristics and identity?

    <p>Side chain properties</p> Signup and view all the answers

    What is the primary function of most enzymes in the body?

    <p>Catalyzing metabolic processes</p> Signup and view all the answers

    What gives each amino acid its unique characteristics and identity?

    <p>Distinctive side chain or R group</p> Signup and view all the answers

    What type of bond is characteristic of proteins?

    <p>Peptide bond</p> Signup and view all the answers

    How many different proteins are there in the human body?

    <p>$ ext{~}100,000$</p> Signup and view all the answers

    What does denaturation refer to?

    <p>Unfolding of a protein from its native state</p> Signup and view all the answers

    What type of interactions occur between nonpolar R groups in proteins?

    <p>Van der Waals interactions</p> Signup and view all the answers

    What determines the three-dimensional shape of an individual polypeptide chain in proteins?

    <p>Interactions among R groups</p> Signup and view all the answers

    How do disulfide bridges form in proteins?

    <p>Through covalent bonding between two cysteine residues' carboxylic acid groups</p> Signup and view all the answers

    What allows proteins to have a combination of both alpha helices and beta pleated sheets in their structure?

    <p>Interactions among R groups</p> Signup and view all the answers

    What is the cause of sickle cell anemia?

    <p>Abnormalities in hemoglobin synthesis</p> Signup and view all the answers

    What type of side chains make the amino acid hydrophobic?

    <p>Side chains containing pure hydrocarbon alkyl groups or aromatic rings</p> Signup and view all the answers

    How many amino acids are commonly found in proteins?

    <p>20</p> Signup and view all the answers

    What is the primary function of hydrogen bonding in protein structure?

    <p>Stabilizing the secondary structure of proteins</p> Signup and view all the answers

    In which protein structure do alpha helices form a spiral structure?

    <p>Secondary structure</p> Signup and view all the answers

    What is the role of alpha helices in protein structure?

    <p>They have hydrogen bonding between amino acids in the same chain, forming a spiral structure</p> Signup and view all the answers

    What does beta pleated sheets have hydrogen bonding between?

    <p>Different polypeptide chains or regions of the same chain that have turned back on themselves</p> Signup and view all the answers

    What determines the polarity and charge of an amino acid?

    <p>The side chains (R groups)</p> Signup and view all the answers

    What level of protein organization is determined by interactions among its R groups?

    <p>Tertiary structure</p> Signup and view all the answers

    What is the fundamental unit that all amino acids share?

    <p>Central carbon bonded to a hydrogen atom, an amino group, a carboxyl group, and a variable R group</p> Signup and view all the answers

    What allows proteins to have a combination of both alpha helices and beta pleated sheets in their structure?

    <p>The specific conformation formed by polypeptide chains affecting the protein's function</p> Signup and view all the answers

    Explain the different types of interactions that contribute to protein structure and stability.

    <p>Protein structure and stability are influenced by a variety of interactions. Hydrophobic interactions occur between nonpolar R groups, van der Waals interactions are weak electric forces between neutral molecules, and covalent bonds, specifically disulfide bonds, are the strongest interactions in proteins.</p> Signup and view all the answers

    Describe the process of protein folding in vitro and in vivo.

    <p>In vitro, a protein can spontaneously fold and adopt its functional conformation. In vivo, proteins are assisted in folding by molecular chaperones, which bind to exposed and unfolded regions, aiding in the correct folding process.</p> Signup and view all the answers

    What is the quaternary structure of a protein and provide an example?

    <p>The quaternary structure refers to the arrangement of multiple polypeptide chains in a protein. An example is hemoglobin, which consists of four polypeptide chains (two alpha and two beta).</p> Signup and view all the answers

    What is the role of enzymes in biological reactions?

    <p>Proteins act as enzymes, which are biological catalysts that speed up chemical reactions. Enzymes are specific to certain reactions and have a unique shape to interact with their substrates. They are not changed by the reaction they catalyze and can be reused.</p> Signup and view all the answers

    Explain the impact of denaturation on protein structure and function.

    <p>Denaturation refers to the loss of a protein's three-dimensional structure and biological activity. Proteins can be denatured by changes in temperature, chemical exposure, or pH, leading to a loss of biological activity.</p> Signup and view all the answers

    Discuss the relationship between protein structure and function.

    <p>Proteins have different functions based on their structure and domains. The tertiary structure of a protein refers to the three-dimensional arrangement of a single polypeptide chain, which contributes to its specific function.</p> Signup and view all the answers

    What causes sickle cell anemia and how does it affect red blood cells?

    <p>Sickle cell anemia is caused by a single point mutation, resulting in a change in the amino acid sequence and the formation of sickle-shaped red blood cells. This alters the shape of the red blood cells and affects their ability to carry oxygen.</p> Signup and view all the answers

    How do disulfide bridges form in proteins and what is their significance?

    <p>Disulfide bridges form between two cysteine monomers in a protein through the oxidation of sulfhydryl groups. These covalent bonds contribute to the protein's stability and structure.</p> Signup and view all the answers

    Explain the role of molecular chaperones in protein folding.

    <p>In vivo, proteins are assisted in folding by molecular chaperones, which bind to exposed and unfolded regions, aiding in the correct folding process and preventing misfolding or aggregation.</p> Signup and view all the answers

    What are the different types of protein structure and their respective characteristics?

    <p>Proteins have different levels of structure including primary, secondary, tertiary, and quaternary structures. The primary structure refers to the linear sequence of amino acids, while the secondary structure involves local folding patterns such as alpha helices and beta sheets. The tertiary structure refers to the three-dimensional arrangement of a single polypeptide chain, and the quaternary structure involves the arrangement of multiple polypeptide chains in a protein.</p> Signup and view all the answers

    What are proteins made up of?

    <p>Proteins are macromolecules composed of amino acids.</p> Signup and view all the answers

    How many different proteins are there in the human body?

    <p>Approximately 100,000 different proteins in the human body.</p> Signup and view all the answers

    What is the role of molecular chaperones in protein synthesis?

    <p>Molecular chaperones assist in the proper folding of proteins during synthesis.</p> Signup and view all the answers

    What is the primary function of most enzymes in the body?

    <p>Most enzymes are important for catalyzing metabolic processes in the body.</p> Signup and view all the answers

    What determines the unique characteristics and identity of each amino acid?

    <p>The distinctive side chain or R group of each amino acid gives it unique characteristics and identity.</p> Signup and view all the answers

    Explain the role of specialised proteins termed ‘enzymes’ in the body.

    <p>Enzymes play a crucial role in catalyzing metabolic processes in the body.</p> Signup and view all the answers

    Describe the role of structural and functional domains in protein tertiary structure.

    <p>Structural and functional domains contribute to the overall tertiary structure and function of proteins.</p> Signup and view all the answers

    What is the fundamental structure of all amino acids?

    <p>All amino acids have a central carbon and hydrogen, an amino functional group, and a carboxylic acid functional group or carboxylate.</p> Signup and view all the answers

    What are some major functions of proteins in cells?

    <p>Proteins are major structural components of cells and are essential for growth, repair, and maintenance of the cell.</p> Signup and view all the answers

    What is the primary purpose of the Foundation Year Fundamentals of Human Biology course?

    <p>The primary purpose is to provide an understanding of the fundamentals of human biology, including biomolecules such as proteins.</p> Signup and view all the answers

    Explain the difference between polar and non-polar side chains in amino acids, and how they affect the hydrophilic or hydrophobic nature of the amino acid.

    <p>Polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic.</p> Signup and view all the answers

    Describe the four levels of protein organization and the specific characteristics of each level.

    <p>The four levels of protein organization are primary, secondary, tertiary, and quaternary. The primary structure refers to the sequence of amino acids joined by peptide bonds. The secondary structure involves repeating patterns formed by hydrogen bonding between amino acids, such as alpha helices and beta pleated sheets. Tertiary structure is the three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups. Quaternary structure refers to the arrangement of multiple polypeptide chains in a protein.</p> Signup and view all the answers

    How does hydrogen bonding contribute to the stability and function of proteins?

    <p>Hydrogen bonding plays a crucial role in protein structure and function by providing stability. It is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. Although weaker than covalent bonds, the numerous hydrogen bonds in a protein allow it to be stabilized.</p> Signup and view all the answers

    Explain the structural characteristics and bonding involved in alpha helices and beta pleated sheets.

    <p>Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure. Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure.</p> Signup and view all the answers

    What are the primary functions of proteins in the body?

    <p>Proteins have diverse functions, including catalyzing biochemical reactions (as enzymes), providing structural support, transporting essential molecules, and serving as signaling molecules.</p> Signup and view all the answers

    How many commonly found amino acids are there in proteins, and what are the classifications of these amino acids?

    <p>There are 20 commonly found amino acids in proteins. They are classified as polar, non-polar, acidic, and basic.</p> Signup and view all the answers

    Explain the relationship between polypeptide chain conformation and protein function.

    <p>The specific conformation of polypeptide chains affects the protein's function. The arrangement of the amino acids and their interactions determine the protein's overall structure and activity.</p> Signup and view all the answers

    What determines the polarity and charge of an amino acid?

    <p>The side chains (R groups) of amino acids determine their polarity and charge, with polar and non-polar side chains contributing to the hydrophilic or hydrophobic nature of the amino acid.</p> Signup and view all the answers

    How do alpha helices and beta pleated sheets contribute to the three-dimensional structure of proteins?

    <p>The presence of alpha helices and beta pleated sheets, formed by hydrogen bonding between amino acids, contributes to the overall three-dimensional shape of proteins, influencing their stability and function.</p> Signup and view all the answers

    What are the main types of interactions involved in determining the tertiary structure of a protein?

    <p>The main types of interactions involved in determining the tertiary structure of a protein are hydrogen bonding, disulfide bridges, hydrophobic interactions, and van der Waals forces.</p> Signup and view all the answers

    Proteins are macromolecules composed of ____________

    <p>amino acids</p> Signup and view all the answers

    Proteins are major structural components of cell –Growth, repair and maintenance of the cell depends on ____________

    <p>proteins</p> Signup and view all the answers

    Most enzymes are ____________ – important for catalyzing metabolic processes

    <p>proteins</p> Signup and view all the answers

    All Amino acids have a fundamentally similar structure: Central Carbon and Hydrogen, Amino functional group, Carboxylic acid functional group / or carboxylate, Distinctive side chain or R group – gives each amino acid its unique characteristics and ____________

    <p>identity</p> Signup and view all the answers

    Describe amino acid structure and the nature of the peptide ____________

    <p>bond</p> Signup and view all the answers

    Explain the role of molecular chaperones in protein ____________

    <p>synthesis</p> Signup and view all the answers

    Explain the role of specialised proteins termed ‘enzymes’ in the ____________

    <p>body</p> Signup and view all the answers

    Haemoglobin is a protein consisting of four polypeptide ______ (two alpha and two beta)

    <p>chains</p> Signup and view all the answers

    In vitro, a ______ can spontaneously fold and adopt its functional conformation

    <p>protein</p> Signup and view all the answers

    ______ refers to the loss of a protein's three-dimensional structure and biological activity

    <p>Denaturation</p> Signup and view all the answers

    Proteins act as ______, which are biological catalysts that speed up chemical reactions

    <p>enzymes</p> Signup and view all the answers

    Enzymes are specific to certain ______ and have a unique shape to interact with their substrates

    <p>reactions</p> Signup and view all the answers

    Enzymes are not changed by the reaction they ______ and can be reused

    <p>catalyze</p> Signup and view all the answers

    Proteins can be ______ by changes in temperature, chemical exposure, or pH, leading to a loss of biological activity

    <p>denatured</p> Signup and view all the answers

    Covalent ______, specifically disulfide ______, are the strongest interactions in proteins

    <p>bonds</p> Signup and view all the answers

    Proteins have different ______ based on their structure and domains

    <p>functions</p> Signup and view all the answers

    Sickle cell anemia is a disease caused by a single point ______, resulting in a change in the amino acid sequence and the formation of sickle-shaped red blood cells

    <p>mutation</p> Signup and view all the answers

    Proteins are made up of amino acids with varying ______ (R groups) which determine the polarity and charge of the amino acid

    <p>side chains</p> Signup and view all the answers

    Amino acids are classified as polar, non-polar, acidic, and ______

    <p>basic</p> Signup and view all the answers

    Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid

    <p>hydrophilic</p> Signup and view all the answers

    non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid

    <p>hydrophobic</p> Signup and view all the answers

    There are only 20 amino acids commonly found in

    <p>proteins</p> Signup and view all the answers

    Protein structure: polypeptide chains form a specific conformation, which affects the protein's

    <p>function</p> Signup and view all the answers

    Four levels of protein organization: primary, secondary, tertiary, and

    <p>quaternary</p> Signup and view all the answers

    Primary structure: sequence of amino acids joined by

    <p>peptide bonds</p> Signup and view all the answers

    Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated

    <p>sheets</p> Signup and view all the answers

    Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be

    <p>stabilized</p> Signup and view all the answers

    Proteins can have a combination of both alpha helices and beta pleated sheets in their

    <p>structure</p> Signup and view all the answers

    Proteins are macromolecules composed of ____________

    <p>amino acids</p> Signup and view all the answers

    Most enzymes are proteins – important for catalyzing ____________ processes

    <p>metabolic</p> Signup and view all the answers

    Proteins are major structural components of cell –Growth, repair and maintenance of the cell depends on ____________

    <p>proteins</p> Signup and view all the answers

    Amino acids have a fundamentally similar structure: Central Carbon and Hydrogen, Amino functional group, Carboxylic acid functional group, and Distinctive side chain or R group – gives each amino acid its unique characteristics and ____________

    <p>identity</p> Signup and view all the answers

    Most versatile cell components 12/22/2023 Biology RCSI-MUB Proteins Most enzymes are proteins – important for catalyzing ____________ processes

    <p>metabolic</p> Signup and view all the answers

    Proteins act as ______, which are biological catalysts that speed up chemical reactions

    <p>enzymes</p> Signup and view all the answers

    Most versatile cell components 12/22/2023 Biology RCSI-MUB Proteins Proteins are major structural components of cell –Growth, repair and maintenance of the cell depends on ____________

    <p>proteins</p> Signup and view all the answers

    All Amino acids have a fundamentally similar structure: Central Carbon and Hydrogen, Amino functional group, Carboxylic acid functional group, and Distinctive side chain or R group – gives each amino acid its unique characteristics and ____________

    <p>identity</p> Signup and view all the answers

    Most enzymes are proteins – important for catalyzing ____________ processes

    <p>metabolic</p> Signup and view all the answers

    Proteins are macromolecules composed of ____________

    <p>amino acids</p> Signup and view all the answers

    Disulfide bridges form between two ______ monomers in a protein

    <p>cysteine</p> Signup and view all the answers

    In vitro, a protein can spontaneously fold and adopt its functional ______

    <p>conformation</p> Signup and view all the answers

    Proteins act as ______, which are biological catalysts that speed up chemical reactions

    <p>enzymes</p> Signup and view all the answers

    Proteins are macromolecules composed of ______

    <p>amino acids</p> Signup and view all the answers

    Sickle cell anemia is a disease caused by a single point mutation, resulting in a change in the amino acid sequence and the formation of ______ red blood cells

    <p>sickle-shaped</p> Signup and view all the answers

    ______ refers to the loss of a protein's three-dimensional structure and biological activity

    <p>Denaturation</p> Signup and view all the answers

    Enzymes are specific to certain reactions and have a unique shape to interact with their ______

    <p>substrates</p> Signup and view all the answers

    Proteins can be ______ by changes in temperature, chemical exposure, or pH, leading to a loss of biological activity

    <p>denatured</p> Signup and view all the answers

    Haemoglobin is a protein consisting of four polypeptide chains (two alpha and two ______)

    <p>beta</p> Signup and view all the answers

    Tertiary structure of a protein refers to the three-dimensional arrangement of a single ______ chain

    <p>polypeptide</p> Signup and view all the answers

    Proteins are made up of amino acids with varying ______ (R groups) which determine the polarity and charge of the amino acid

    <p>side chains</p> Signup and view all the answers

    Amino acids are classified as polar, non-polar, acidic, and _______

    <p>basic</p> Signup and view all the answers

    Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid _______

    <p>hydrophobic</p> Signup and view all the answers

    There are only 20 amino acids commonly found in _______

    <p>proteins</p> Signup and view all the answers

    Four levels of protein organization: primary, secondary, tertiary, and _______

    <p>quaternary</p> Signup and view all the answers

    Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated _______

    <p>sheets</p> Signup and view all the answers

    Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to _______

    <p>function</p> Signup and view all the answers

    Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be _______

    <p>stabilized</p> Signup and view all the answers

    Alpha helices have hydrogen bonding between amino acids in the same chain, forming a _______ structure

    <p>spiral</p> Signup and view all the answers

    Proteins can have a combination of both alpha helices and beta pleated sheets in their _______

    <p>structure</p> Signup and view all the answers

    Study Notes

    • Proteins are made up of amino acids with varying side chains (R groups) which determine the polarity and charge of the amino acid

    • Amino acids are classified as polar, non-polar, acidic, and basic

    • Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic

    • There are only 20 amino acids commonly found in proteins

    • Protein structure: polypeptide chains form a specific conformation, which affects the protein's function

    • Four levels of protein organization: primary, secondary, tertiary, and quaternary

    • Primary structure: sequence of amino acids joined by peptide bonds

    • Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated sheets

    • Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to function

    • Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be stabilized.

    • Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure

    • Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure

    • Proteins can have a combination of both alpha helices and beta pleated sheets in their structure.

    • Hydrophobic interactions occur between nonpolar R groups in proteins (weak interactions)

    • Van der Waals interactions are weak electric forces between neutral molecules

    • Covalent bonds, specifically disulfide bonds, are the strongest interactions in proteins

    • Disulfide bridges form between two cysteine monomers in a protein

    • Tertiary structure of a protein refers to the three-dimensional arrangement of a single polypeptide chain

    • Quaternary structure refers to the arrangement of multiple polypeptide chains in a protein

    • In vitro, a protein can spontaneously fold and adopt its functional conformation

    • In vivo, proteins are assisted in folding by molecular chaperones, which bind to exposed and unfolded regions

    • Proteins have different functions based on their structure and domains

    • Haemoglobin is a protein consisting of four polypeptide chains (two alpha and two beta)

    • Sickle cell anemia is a disease caused by a single point mutation, resulting in a change in the amino acid sequence and the formation of sickle-shaped red blood cells

    • Denaturation refers to the loss of a protein's three-dimensional structure and biological activity

    • Proteins act as enzymes, which are biological catalysts that speed up chemical reactions

    • Enzymes are specific to certain reactions and have a unique shape to interact with their substrates

    • Enzymes are not changed by the reaction they catalyze and can be reused

    • Proteins can be denatured by changes in temperature, chemical exposure, or pH, leading to a loss of biological activity.

    • Proteins are made up of amino acids with varying side chains (R groups) which determine the polarity and charge of the amino acid

    • Amino acids are classified as polar, non-polar, acidic, and basic

    • Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic

    • There are only 20 amino acids commonly found in proteins

    • Protein structure: polypeptide chains form a specific conformation, which affects the protein's function

    • Four levels of protein organization: primary, secondary, tertiary, and quaternary

    • Primary structure: sequence of amino acids joined by peptide bonds

    • Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated sheets

    • Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to function

    • Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be stabilized.

    • Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure

    • Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure

    • Proteins can have a combination of both alpha helices and beta pleated sheets in their structure.

    • Proteins are made up of amino acids with varying side chains (R groups) which determine the polarity and charge of the amino acid

    • Amino acids are classified as polar, non-polar, acidic, and basic

    • Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic

    • There are only 20 amino acids commonly found in proteins

    • Protein structure: polypeptide chains form a specific conformation, which affects the protein's function

    • Four levels of protein organization: primary, secondary, tertiary, and quaternary

    • Primary structure: sequence of amino acids joined by peptide bonds

    • Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated sheets

    • Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to function

    • Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be stabilized.

    • Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure

    • Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure

    • Proteins can have a combination of both alpha helices and beta pleated sheets in their structure.

    • Proteins are made up of amino acids with varying side chains (R groups) which determine the polarity and charge of the amino acid

    • Amino acids are classified as polar, non-polar, acidic, and basic

    • Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic

    • There are only 20 amino acids commonly found in proteins

    • Protein structure: polypeptide chains form a specific conformation, which affects the protein's function

    • Four levels of protein organization: primary, secondary, tertiary, and quaternary

    • Primary structure: sequence of amino acids joined by peptide bonds

    • Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated sheets

    • Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to function

    • Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be stabilized.

    • Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure

    • Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure

    • Proteins can have a combination of both alpha helices and beta pleated sheets in their structure.

    • Proteins are made up of amino acids with varying side chains (R groups) which determine the polarity and charge of the amino acid

    • Amino acids are classified as polar, non-polar, acidic, and basic

    • Polar and non-polar side chains: polar side chains contain functional groups like acids, amides, alcohols, and amines which make the amino acid hydrophilic, while non-polar side chains contain pure hydrocarbon alkyl groups or aromatic rings which make the amino acid hydrophobic

    • There are only 20 amino acids commonly found in proteins

    • Protein structure: polypeptide chains form a specific conformation, which affects the protein's function

    • Four levels of protein organization: primary, secondary, tertiary, and quaternary

    • Primary structure: sequence of amino acids joined by peptide bonds

    • Secondary structure: repeating patterns formed by hydrogen bonding between amino acids in a short stretch of the polypeptide chain, such as the alpha helices and beta pleated sheets

    • Tertiary structure: three-dimensional shape of an individual polypeptide chain, determined by interactions among its R groups, which allows the protein to function

    • Hydrogen bonding plays a crucial role in protein structure and function, and is a non-covalent bond between a hydrogen atom with a partial positive charge and an oxygen or nitrogen atom with a partial negative charge. It is weaker than covalent bonds but the numerous hydrogen bonds in a protein allow it to be stabilized.

    • Alpha helices have hydrogen bonding between amino acids in the same chain, forming a spiral structure

    • Beta pleated sheets have hydrogen bonding between different polypeptide chains or regions of the same chain that have turned back on themselves, forming a sheet-like structure

    • Proteins can have a combination of both alpha helices and beta pleated sheets in their structure.

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    FUNBIO.3_Proteins 2023 WT.pptx

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    Test your knowledge on the fundamentals of biomolecules, specifically proteins, including amino acid structure, peptide bond nature, and polypeptide structure. Explore the roles of structural and functional proteins in human biology.

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