Podcast
Questions and Answers
What is the primary role of the extracellular matrix (ECM)?
What is the primary role of the extracellular matrix (ECM)?
- To store energy for cell metabolism
- To provide structural support for the cells (correct)
- To provide oxygen to the cells
- To enhance DNA replication
Which collagen type is predominantly used in the preparation of collagen hydrogels?
Which collagen type is predominantly used in the preparation of collagen hydrogels?
- Type I Collagen (correct)
- Type IV Collagen
- Type III Collagen
- Type II Collagen
What happens to collagen fibers in hydrogels as the concentration of collagen increases?
What happens to collagen fibers in hydrogels as the concentration of collagen increases?
- The fibers become thinner and more fragile.
- The fibers become thicker and less dense.
- The fibers remain unchanged in structure.
- The fibers become denser and pore size decreases. (correct)
What advantage do 3D cell culture environments have over 2D culture environments?
What advantage do 3D cell culture environments have over 2D culture environments?
How does an increase in pH affect the diameter of collagen fibers?
How does an increase in pH affect the diameter of collagen fibers?
How do hydrogels contribute to tissue engineering?
How do hydrogels contribute to tissue engineering?
At what temperature does collagen hydrogel polymerization achieve a uniform fiber diameter?
At what temperature does collagen hydrogel polymerization achieve a uniform fiber diameter?
What role does the ECM play in relation to cell attachment?
What role does the ECM play in relation to cell attachment?
What is the physiological pH value at which the hydrogel polymerization will be initiated?
What is the physiological pH value at which the hydrogel polymerization will be initiated?
Why is it important to study how changes in the ECM contribute to disease progression?
Why is it important to study how changes in the ECM contribute to disease progression?
What is observed in collagen hydrogels with low temperatures during polymerization?
What is observed in collagen hydrogels with low temperatures during polymerization?
In which application are collagen hydrogels NOT typically used?
In which application are collagen hydrogels NOT typically used?
What step is included in the lab protocol before the preparation of collagen hydrogels?
What step is included in the lab protocol before the preparation of collagen hydrogels?
What is a critical factor in the design of synthetic ECM analogs using hydrogels?
What is a critical factor in the design of synthetic ECM analogs using hydrogels?
Which type of collagen is specified for use in the hydrogel polymerization experiment?
Which type of collagen is specified for use in the hydrogel polymerization experiment?
What effect does increasing the polymerization temperature generally have on the fiber diameter?
What effect does increasing the polymerization temperature generally have on the fiber diameter?
What is the purpose of adding APTES and GA to the glass coverslips?
What is the purpose of adding APTES and GA to the glass coverslips?
How long should the petri dishes remain in the incubator for collagen hydrogel formation?
How long should the petri dishes remain in the incubator for collagen hydrogel formation?
What indicates the completion of gelation in the collagen solution?
What indicates the completion of gelation in the collagen solution?
What was observed regarding pore size in collagen hydrogels of different concentrations?
What was observed regarding pore size in collagen hydrogels of different concentrations?
What feature was the highest fiber density observed in?
What feature was the highest fiber density observed in?
What is the effect of working on ice during the gel solutions preparation?
What is the effect of working on ice during the gel solutions preparation?
Which component is excluded in the preparation of the collagen hydrogels?
Which component is excluded in the preparation of the collagen hydrogels?
What concentration of collagen hydrogel was specifically mentioned as part of the results?
What concentration of collagen hydrogel was specifically mentioned as part of the results?
Flashcards
Collagen Concentration
Collagen Concentration
The amount of collagen present in a solution or matrix.
Collagen Fiber Density
Collagen Fiber Density
The closeness and compactness of collagen fibers in a hydrogel.
pH Effect on Fibers
pH Effect on Fibers
Higher pH values result in thinner collagen fibers in hydrogels.
Polymerization Temperature
Polymerization Temperature
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Collagen Hydrogel
Collagen Hydrogel
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Collagen Source
Collagen Source
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Hydrogel Pore Size
Hydrogel Pore Size
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Collagen Polymerization Rate
Collagen Polymerization Rate
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Extracellular Matrix (ECM)
Extracellular Matrix (ECM)
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Collagen
Collagen
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3D cell culture
3D cell culture
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Synthetic ECM Analog
Synthetic ECM Analog
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Tissue Engineering
Tissue Engineering
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In-vitro tissue model
In-vitro tissue model
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Type I Collagen
Type I Collagen
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Collagen Hydrogel Concentration
Collagen Hydrogel Concentration
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Gel Solution Pipetting
Gel Solution Pipetting
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Hydrogel Formation
Hydrogel Formation
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APTES-GA Coating
APTES-GA Coating
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Turbidity (in gel)
Turbidity (in gel)
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Higher Collagen Concentration
Higher Collagen Concentration
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Lower Collagen Concentration
Lower Collagen Concentration
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Coverslip Preparation
Coverslip Preparation
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Study Notes
Course Information
- Course Title: Biomaterials
- Course Number: ENGR-UH 4810
- Professor: Jeremy Teo
- Instructor: Shafiya Sabah
- Semester: Fall 2024
Lab 4: Fabrication of Collagen Hydrogel and its Use as a Cell Culture System
Collagen and the Extracellular Matrix
- Collagen is the most abundant structural protein in the extracellular matrix (ECM).
- The ECM is a complex network of proteins and macromolecules surrounding cells in tissues.
- ECM provides structural support for cells.
- ECM helps cells attach to and communicate with nearby cells.
- ECM plays a role in cell growth and movement.
Mimicking the Extracellular Matrix
- Creating in-vitro tissue models that mimic the structural, mechanical, and physical properties of the ECM is desirable.
- This helps better understand cell behavior.
- It enables the study of ECM changes contributing to disease progression.
- Mimicking native tissue, hydrogels are a key material in developing synthetic ECM analogs for regenerative medicine.
3D Cell Culture Systems
- Cells in 3D culture environments differ morphologically and physiologically from cells in 2D culture environments.
- 3D cell culture systems more accurately represent the microenvironment found in tissues.
Collagen Hydrogels
- Collagen hydrogels are used as 3D cell culture substrates, scaffolds in tissue engineering, and to study tumor progression.
- Collagen type I is the primary type in most hydrogels, readily extracted from animal sources (bovine, porcine, rat tail tendon, fish).
- Collagen hydrogel polymerization rate is slow in low temperatures, resulting in thicker fibers; at 37°C, a uniform diameter is obtained.
Collagen Hydrogel Preparation
- 3D collagen matrices with variable fiber thickness and length can be prepared in vitro by altering polymerization conditions (e.g., collagen concentration, pH, temperature).
- Higher collagen concentration leads to denser fibers and smaller pores.
- Increasing pH leads to thinner collagen fibers.
Lab Protocol
- Preparation:
- Prepare ice containers.
- Label microcentrifuge tubes and petri dishes with concentration (3mg/ml and 1mg/ml) and group number.
- Place coated coverslips on petri dishes.
- Add solutions to the tubes in the specified order:
- Column 1: Coll (mg/ml)
- Column 2: 0.1% Acetic Acid
- Column 3: Coll
- Column 4: Buffer
- Procedure:
- Pipette gel solutions onto coverslips (50µL per coverslip).
- Place petri dishes in a 37°C incubator for 40-45 minutes.
- Remove petri dishes from the incubator; the gels appear turbid (white), indicating gelation.
Coverslip Preparation
- Glass coverslips are coated with APTES (3-aminopropyl)triethoxysilane and glutaraldehyde (GA).
- The APTES-GA coating immobilizes hydrogels on coverslip surfaces through covalent bonding.
- Calculations for creating 1% and 0.5% GA solutions are provided for APTES and GA coating.
Results
- 1 mg/mL collagen concentration hydrogels have larger pores than 3 mg/mL collagen hydrogels.
- 3 mg/mL collagen hydrogels exhibit higher fiber density.
- Cell morphology and cytoskeleton structures differ in 1 mg/ml and 3 mg/ml environments.
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