Biology Water and Macromolecules
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Questions and Answers

What is the chemical formula for water?

H2O

What type of bond holds water molecules together?

Hydrogen bonds

What are the three properties of water due to its polarity?

  • Cohesion, adhesion, and surface tension (correct)
  • Acidity, basicity, and buffering capacity
  • Solubility, density, and freezing point
  • Temperature regulation, pH, and viscosity
  • When water freezes, its molecules spread farther apart, causing a decrease in density.

    <p>True</p> Signup and view all the answers

    Why is water considered the universal solvent?

    <p>Water is a polar molecule that can dissolve both polar and ionic molecules.</p> Signup and view all the answers

    What are macromolecules?

    <p>Large molecules made of smaller repeating units called monomers.</p> Signup and view all the answers

    What are the four main types of macromolecules?

    <p>Carbohydrates, lipids, proteins, and nucleic acids.</p> Signup and view all the answers

    What are the monomers of proteins?

    <p>Amino acids.</p> Signup and view all the answers

    What determines the specific structure of a protein?

    <p>The sequence and properties of its amino acids, specifically its R groups.</p> Signup and view all the answers

    What are the four levels of protein structure?

    <p>Primary, secondary, tertiary, and quaternary</p> Signup and view all the answers

    What is the primary structure of a protein?

    <p>The linear sequence of amino acids in a polypeptide chain.</p> Signup and view all the answers

    What is the secondary structure of a protein?

    <p>The local folding and arrangement of the polypeptide chain, forming alpha helices and beta pleated sheets.</p> Signup and view all the answers

    What is the quaternary structure of a protein?

    <p>The arrangement of multiple polypeptide chains (subunits) in a protein complex.</p> Signup and view all the answers

    What is the general chemical formula for carbohydrates?

    <p>CHO (1:2:1).</p> Signup and view all the answers

    What are the monomers of carbohydrates?

    <p>Monosaccharides.</p> Signup and view all the answers

    What is the primary function of carbohydrates in cells?

    <p>To provide energy.</p> Signup and view all the answers

    What type of carbohydrate is found in cell walls?

    <p>Cellulose.</p> Signup and view all the answers

    What type of carbohydrate is used for long-term energy storage in plants?

    <p>Starch.</p> Signup and view all the answers

    What is the general chemical formula for lipids?

    <p>CHO (1:2:few).</p> Signup and view all the answers

    Lipids are hydrophobic.

    <p>True</p> Signup and view all the answers

    Identify the three main types of lipids.

    <p>Steroids, fats, and phospholipids.</p> Signup and view all the answers

    What are fats composed of?

    <p>Glycerol and fatty acids.</p> Signup and view all the answers

    What is the difference between saturated and unsaturated fats?

    <p>Saturated fats have all single bonds between carbon atoms, while unsaturated fats have at least one double bond between carbon atoms.</p> Signup and view all the answers

    What is a triglyceride?

    <p>A molecule composed of glycerol and three fatty acid chains.</p> Signup and view all the answers

    What is a phospholipid?

    <p>A lipid that has a phosphate group attached to glycerol.</p> Signup and view all the answers

    Why are phospholipids important for cell membranes?

    <p>Their amphipathic properties allow them to form a bilayer in which the hydrophilic heads face the aqueous environment, and the hydrophobic tails face inward, creating a barrier between the inside and outside of the cell.</p> Signup and view all the answers

    What are the two main types of nucleic acids?

    <p>DNA and RNA.</p> Signup and view all the answers

    What are the monomers of nucleic acids?

    <p>Nucleotides.</p> Signup and view all the answers

    Which of the following are nitrogenous bases found in DNA?

    <p>Adenine, guanine, cytosine, and thymine</p> Signup and view all the answers

    What is the structure of DNA?

    <p>DNA is a double helix in which two strands of nucleotides are antiparallel and held together by hydrogen bonds between complementary base pairs.</p> Signup and view all the answers

    What is the difference between DNA and RNA?

    <p>DNA uses deoxyribose as its sugar and has thymine as one of its nitrogenous bases, while RNA uses ribose as its sugar and has uracil instead of thymine.</p> Signup and view all the answers

    What is the function of the amino group?

    <p>The amino group is a nitrogen-containing functional group with the formula NH2.</p> Signup and view all the answers

    What is the function of the carboxyl group?

    <p>The carboxyl group is a functional group with the formula COOH, which is acidic.</p> Signup and view all the answers

    What is the function of the phosphate group?

    <p>The phosphate group is a functional group with the formula PO4, which carries a negative charge.</p> Signup and view all the answers

    What is the flagellum?

    <p>A long, whip-like structure that helps some cells move.</p> Signup and view all the answers

    What is the endoplasmic reticulum (ER)?

    <p>A network of interconnected membranous sacs and tubules that is involved in protein synthesis and lipid metabolism.</p> Signup and view all the answers

    What is the nuclear envelope?

    <p>A double membrane that surrounds the nucleus and regulates the passage of molecules between the nucleus and the cytoplasm.</p> Signup and view all the answers

    What is chromatin?

    <p>A complex of DNA and proteins that condense into chromosomes during cell division.</p> Signup and view all the answers

    What is the nucleolus?

    <p>A structure within the nucleus where ribosomes are assembled.</p> Signup and view all the answers

    What is the plasma membrane?

    <p>A selectively permeable phospholipid bilayer that surrounds all cells and regulates the passage of molecules in and out of the cell.</p> Signup and view all the answers

    What are ribosomes?

    <p>Small organelles composed of RNA and protein that are responsible for protein synthesis.</p> Signup and view all the answers

    What is the Golgi apparatus?

    <p>A series of flattened membranous sacs that are involved in the processing, sorting, and packaging of proteins and lipids.</p> Signup and view all the answers

    What are mitochondria?

    <p>Organelles that are responsible for cellular respiration, the process that converts food into energy (ATP).</p> Signup and view all the answers

    What are microvilli?

    <p>Finger-like projections that increase the surface area of cells, which can enhance absorption.</p> Signup and view all the answers

    What is the cytoskeleton?

    <p>A network of protein fibers that provides structural support, helps with cell movement, and anchors organelles.</p> Signup and view all the answers

    What is the centrosome?

    <p>A structure that organizes microtubules and contains a pair of centrioles.</p> Signup and view all the answers

    What is the cell wall?

    <p>A rigid outer layer that surrounds plant cells and provides structural support and protection.</p> Signup and view all the answers

    What is the central vacuole?

    <p>A large, fluid-filled sac that stores water, nutrients, and waste products in plant cells.</p> Signup and view all the answers

    What are plasmodesmata?

    <p>Channels that connect the cytoplasm of adjacent plant cells, allowing for communication and transport between cells.</p> Signup and view all the answers

    What are chloroplasts?

    <p>Organelles that are responsible for photosynthesis, the process that transforms light energy into chemical energy stored in sugar.</p> Signup and view all the answers

    What is a peripheral protein?

    <p>A protein that is attached to the surface of a cell membrane and does not extend through the membrane.</p> Signup and view all the answers

    What is a glycolipid?

    <p>A lipid with a carbohydrate attached to it.</p> Signup and view all the answers

    What is an integral protein?

    <p>A protein that extends through the cell membrane and has regions exposed to both the inside and outside of the cell.</p> Signup and view all the answers

    What is a transport protein?

    <p>An integral protein that helps to move molecules across the cell membrane.</p> Signup and view all the answers

    What is cholesterol?

    <p>A lipid that is found in cell membranes and helps to regulate membrane fluidity.</p> Signup and view all the answers

    What is a phospholipid bilayer?

    <p>A double layer of phospholipids that forms the basis of cell membranes.</p> Signup and view all the answers

    How does the cytoskeleton interact with the phospholipid bilayer?

    <p>The cytoskeleton provides structural support to the cell membrane and can influence its shape and movement.</p> Signup and view all the answers

    What types of substances pass easily through the cell membrane?

    <p>Small, nonpolar molecules.</p> Signup and view all the answers

    What is passive transport?

    <p>The movement of molecules across a cell membrane that does not require energy.</p> Signup and view all the answers

    What is net diffusion?

    <p>The overall direction of movement for a molecule across a membrane, based on the concentration gradient.</p> Signup and view all the answers

    Define diffusion.

    <p>The movement of molecules from an area of high concentration to an area of low concentration, until equilibrium is reached.</p> Signup and view all the answers

    What is facilitated diffusion?

    <p>A type of passive transport that requires the assistance of transport proteins to move molecules across a membrane.</p> Signup and view all the answers

    What is osmosis?

    <p>The facilitated diffusion of water across a selectively permeable membrane.</p> Signup and view all the answers

    What is solute pumping?

    <p>A type of active transport in which a transport protein uses ATP to pump a solute across a membrane against its concentration gradient.</p> Signup and view all the answers

    What is cotransport?

    <p>A type of active transport in which a transport protein couples the movement of one solute across a membrane with the movement of another solute.</p> Signup and view all the answers

    Describe the three types of endocytosis.

    <p>Phagocytosis (eating), pinocytosis (drinking), and receptor-mediated endocytosis (specific drinking through receptors).</p> Signup and view all the answers

    What is water potential?

    <p>The potential of water to move out of an area, driven by the difference in solute concentration and pressure.</p> Signup and view all the answers

    What is Yp?

    <p>Pressure potential, which is the pressure that is exerted on a solution by its surroundings.</p> Signup and view all the answers

    What are enzymes?

    <p>Proteins that act as biological catalysts, speeding up chemical reactions by lowering the activation energy.</p> Signup and view all the answers

    What is optimal temperature?

    <p>The temperature at which an enzyme has its highest activity.</p> Signup and view all the answers

    What is denaturation?

    <p>The loss of an enzyme's normal shape, causing it to become inactive.</p> Signup and view all the answers

    What is a competitive inhibitor?

    <p>A molecule that binds to the active site of an enzyme, competing with the substrate for binding.</p> Signup and view all the answers

    What is an enzyme-substrate complex?

    <p>A temporary complex that forms when the substrate binds to the active site of an enzyme.</p> Signup and view all the answers

    What is a substrate?

    <p>The reactant molecule that an enzyme acts upon.</p> Signup and view all the answers

    What is the first law of thermodynamics?

    <p>Energy cannot be created or destroyed, only transferred or transformed.</p> Signup and view all the answers

    What is the second law of thermodynamics?

    <p>Every energy change increases the overall entropy of the universe.</p> Signup and view all the answers

    What is energy?

    <p>The ability of matter to change position or arrangement.</p> Signup and view all the answers

    What is an endergonic change?

    <p>A non-spontaneous change that requires energy input and results in a decrease in entropy.</p> Signup and view all the answers

    What is photosynthesis?

    <p>The process by which plants, algae, and some bacteria convert light energy into chemical energy stored in sugars.</p> Signup and view all the answers

    What are photosystems?

    <p>Light-harvesting complexes within chloroplasts that capture light energy and transfer it to electrons.</p> Signup and view all the answers

    What is ATP synthase?

    <p>An enzyme that catalyzes the formation of ATP from ADP and inorganic phosphate.</p> Signup and view all the answers

    What is NADP+ reductase?

    <p>An enzyme that catalyzes the reduction of NADP+ to NADPH, using electrons from the electron transport chain.</p> Signup and view all the answers

    What is the electron transport chain in photosynthesis?

    <p>A series of electron carriers embedded in the thylakoid membrane that pass excited electrons along, releasing energy that is used to pump protons.</p> Signup and view all the answers

    Describe the light reactions of photosynthesis.

    <p>The light reactions of photosynthesis capture light energy and convert it into chemical energy in the form of ATP and NADPH.</p> Signup and view all the answers

    Describe the Calvin cycle of photosynthesis.

    <p>The Calvin cycle uses the energy from ATP and NADPH produced in the light reactions to convert carbon dioxide into sugars.</p> Signup and view all the answers

    What is carbon fixation?

    <p>The process by which carbon dioxide from the atmosphere is incorporated into an organic molecule, such as a sugar.</p> Signup and view all the answers

    What are pigments?

    <p>Molecules that absorb light energy at specific wavelengths.</p> Signup and view all the answers

    Study Notes

    Water

    • Water's chemical formula is H₂O.
    • Polar covalent bonds create partial positive and negative charges on the water molecule.

    Hydrogen Bonds

    • A weak bond between a hydrogen atom (partially positive) and another atom (often electronegative).

    Water Properties Due to Polarity

    • Cohesion: Water molecules stick together.
    • Adhesion: Water molecules stick to other substances.
    • Surface tension: Water's ability to resist external forces.

    Water Freezing

    • Water molecules form stable bonds, pushing molecules further apart. This results in lower density of ice compared to liquid water.

    Water Solubility

    • Water is a universal solvent, dissolving many polar and ionic molecules effectively.

    Macromolecules

    • Large molecules composed of smaller molecules.

    Proteins

    • Composed of carbon, hydrogen, oxygen, and nitrogen (CHON).
    • Monomer: amino acids.
    • Polymer: polypeptides.

    R Groups

    • Define protein structure.
    • Different side chains of amino acids with varied properties (ionic, hydrophilic, hydrophobic).
    • Hydrophilic groups face outward; hydrophobic groups inward during protein folding.

    Primary Protein Structure

    • Sequence of amino acids (N-terminus to C-terminus).
    • A single incorrect amino acid can cause a protein to underperform.

    Secondary Protein Structure

    • Folding due to hydrogen bonds between backbone atoms.
    • Two common forms: α-helix and β-pleated sheet.

    Tertiary Protein Structure

    • 3D shape of a polypeptide chain due to interactions between R groups.
    • Folding creates a specific functional structure.

    Quaternary Protein Structure

    • Association of two or more polypeptide chains.

    Carbohydrates

    • Chemical formula: (CH₂O)ₙ.
    • Monomer: Monosaccharides.
    • Polymer: Polysaccharides (primary energy source).
    • Isomers: molecules with the same formula but different structures.

    Cellulose

    • Carbohydrate found in cell walls.

    Starch

    • Carbohydrate for long-term energy storage.

    Lipids

    • Composed of carbon, hydrogen, and oxygen (CHO).
    • Hydrophobic (water-fearing).
    • No monomers.
    • Types include steroids, fats, and phospholipids.

    Fats

    • Glycerol + long hydrocarbon fatty acid chains.
    • Saturated: all carbon-carbon bonds are single bonds.

    Triglyceride

    • Three fatty acids + glycerol; an energy source.

    Phospholipids

    • Amphipathic (part hydrophobic, part hydrophilic).
    • Form bilayers for cell membranes.

    Nucleic Acids

    • Composed of carbon, hydrogen, oxygen, nitrogen, and phosphorus (CHONP).
    • Include RNA and DNA.
    • Made of nucleotides.

    Nitrogenous Bases

    • Guanine, adenine, thymine, cytosine, and uracil.

    DNA Structure

    • Double helix; antiparallel strands.

    Cell Organelles

    • Many cell functions are carried out by organelles within the cell.

    Flagellum

    • Microtubule-based motility structure.

    Endoplasmic Reticulum

    • Membranous sacs and tubes involved in synthesis and membrane transport.
    • Rough ER (with ribosomes): protein synthesis.
    • Smooth ER: lipid synthesis, detoxification.

    Nuclear Envelope

    • Double membrane surrounding the nucleus; continuous with the ER.
    • Contains pores.

    Chromatin

    • DNA and proteins that condense to form chromosomes during cell division.

    Nucleolus

    • Structure within the nucleus where ribosomes are assembled.

    Plasma Membrane

    • Selectively permeable phospholipid bilayer surrounding the cell.

    Ribosomes

    • Protein synthesis site (free, bound to ER, or nuclear envelope).

    Golgi Apparatus

    • Modifies, sorts, and packages proteins for secretion.

    Lysosome

    • Cellular digestive organelle; hydrolyzes macromolecules.

    Mitochondria

    • Site of cellular respiration and ATP generation.

    Peroxisome

    • Metabolic functions, generating and breaking down H₂O₂ (hydrogen peroxide).

    Microvilli

    • Extensions of the cell membrane that increase surface area.

    Cytoskeleton

    • Network of protein filaments (microtubules, microfilaments, intermediate filaments) providing structural support, cell movement, and shape.

    Centrosome

    • Region organizing microtubules; contains centrioles.

    Animal Cell

    • See image for structure.

    Plant Cell

    • See image for structure.

    Cell Wall

    • Provides support and protection. Made of cellulose or other polysaccharides.

    Central Vacuole

    • Large, prominent in plant cells; storage, waste breakdown, and enlargement.

    Plasmodesmata

    • Channels connecting adjacent plant cells.

    Chloroplasts

    • Site of photosynthesis, converting light energy into chemical energy (sugars).

    Mitochondria Structure

    • See picture for detail.

    Chloroplast Structure

    • See picture for detail.

    Peripheral Protein

    • Membrane proteins on the surface, not embedded within the membrane.

    Glycolipid

    • Lipid with a carbohydrate attached.

    Integral Protein

    • Protein that spans the membrane.

    Transport Protein

    • Integral protein that allows controlled movement of specific substances across the membrane.

    Cholesterol

    • A steroid that modulates membrane fluidity.

    Phospholipid Bilayer

    • Two layers of phospholipids forming the cell membrane.

    Cytoskeleton in Bilayer

    • Proteins within the bilayer that provide support and move materials across the membrane.

    Passive Transport

    • Movement across a membrane without the use of energy; down the concentration gradient.

    Simple Diffusion

    • Movement of small, nonpolar molecules across a membrane from high to low concentration.

    Facilitated Diffusion

    • Movement of large, polar molecules across a membrane using transport proteins (specific channels/carriers).

    Osmosis

    • Facilitated diffusion of water across a selectively permeable membrane through special channels known as aquaporins.

    Active Transport

    • Movement of molecules across a membrane against the concentration gradient using energy (ATP).

    Solute Pumping

    • Active transport using ATP to move substances against their concentration gradient.
    • Generates gradients to move more substances via other proteins.

    Cotransport

    • Coupling of solute pump with nutrient transport.
    • Movement of a nutrient with the movement of another solute.

    Bulk Transport

    • Large molecules and particles transported in or out of the cell via exocytosis or endocytosis.

    Endocytosis Types

    • Phagocytosis (eating).
    • Pinocytosis (drinking).
    • Receptor-mediated endocytosis.

    Water Potential

    • Potential of water to move from one area to another.
    • High water potential indicates a lower water concentration.
    • Water moves from high to low water potential.
    • Equation: Y = Ys + Yp

    Yp (Pressure Potential)

    • Pressure component of water potential

    Ys (Solute Potential)

    • Component of water potential related to solute concentration.
    • Equation: Ys = -iCRT -i: ionization constant -C: concentration (M) -R: Ideal gas constant (L bar / K mol) -T: Temperature (K)

    Enzymes

    • Proteins that catalyze biological reactions by lowering activation energy.

    Optimal Temperature

    • Temperature at which an enzyme’s activity is highest.

    Denaturation

    • Loss of a protein's normal shape and function due to environmental changes (temperature, pH)..

    Competitive Inhibitor

    • Binds to the active site of an enzyme, competing with the substrate.

    Noncompetitive Inhibitor

    • Binds to an enzyme at a site other than the active site, changing its shape and reducing activity.

    Enzyme-Substrate Complex

    • Temporary complex formed when an enzyme binds to its substrate.

    Substrate

    • Reactant in an enzyme-catalyzed reaction.

    First Law of Thermodynamics

    • Energy cannot be created or destroyed, only transferred or transformed.

    Second Law of Thermodynamics

    • Every energy transfer increases the entropy (disorder) of the universe.

    Energy

    • Capacity to do work or cause change.

    Entropy

    • Measure of disorder or randomness in a system or the universe.

    Endergonic Change

    • Requires energy input to proceed; not spontaneous.

    Exergonic Change

    • Releases energy; spontaneous.

    Free Energy

    • Energy available to do work in a chemical reaction.

    Photosynthesis

    • Conversion of light energy into chemical energy stored in organic molecules (sugars).

    Photosystems

    • Protein complexes in thylakoid membranes that capture light energy and transfer it to electrons.

    ATP Synthase

    • Enzyme that catalyzes the synthesis of ATP from ADP and phosphate.

    NADP+ Reductase

    • Enzyme that catalyzes the reduction of NADP+ to NADPH.

    Electron Transport Chain (Photosynthesis)

    • Series of electron carriers in the thylakoid membrane that transfer electrons from PSII to PSI, releasing energy for ATP synthesis.

    Light-Dependent Reactions

    • Capture light energy to produce ATP and NADPH; occur in thylakoid membranes.

    Calvin Cycle

    • Uses ATP and NADPH to convert CO₂ into sugars (organic molecules); occurs in the stroma of chloroplasts.

    Carbon Fixation

    • Incorporation of carbon from CO₂ into an organic compound.

    Pigments

    • Molecules that absorb certain wavelengths of light (e.g., chlorophyll).

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    Description

    This quiz covers fundamental concepts related to water's properties, including its chemical structure, hydrogen bonding, and its role as a solvent. Additionally, it discusses macromolecules, focusing on proteins and their composition, structure, and function. Test your understanding of these essential biological topics!

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