Biological Molecules: Functional Groups and Isomers
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Explain how the unique properties of carbon, such as its ability to form four bonds, contribute to the diversity of organic molecules. Provide an example of a specific molecular structure that benefits from this property.

Carbon’s ability to form four bonds allows it to create diverse structures, including long chains, branches, and rings. This versatility leads to a vast array of organic molecules with different shapes and functions. For example, glucose's carbon ring structure allows it to serve as a fundamental energy source in biological systems.

Compare and contrast the structures and primary functions of DNA and RNA. Specifically, address the differences in their sugar composition, nitrogenous bases, and typical secondary structure.

DNA contains deoxyribose sugar and the base thymine (T), forming a double helix to store genetic information. RNA contains ribose sugar and the base uracil (U), typically existing as a single strand and playing a role in protein synthesis and gene expression. The different sugars and bases contribute to their distinct roles.

Describe the process of dehydration synthesis (condensation) and hydrolysis, and explain how these reactions are crucial for the formation and breakdown of biological macromolecules. Give an example of each reaction involving a specific type of macromolecule.

Dehydration synthesis is a process that bonds monomers together by removing water, such as forming peptide bonds in proteins. Hydrolysis breaks polymers into monomers by adding water, such as breaking down starch into glucose. These reactions are crucial for building up and breaking down macromolecules.

Explain how the saturation of fatty acids affects the physical properties (e.g., solid vs. liquid at room temperature) and functions of lipids. Provide an example of a saturated and an unsaturated lipid.

<p>Saturated fatty acids, having only single bonds, are typically solid at room temperature and allow for tight packing, like butter. Unsaturated fatty acids, with double or triple bonds, are usually liquid at room temperature due to the kinks in their structure that prevent tight packing, for example, olive oil.</p> Signup and view all the answers

Describe the four major functions of proteins within a cell. Give a specific example of a protein that performs each type of function.

<p>Proteins can serve as enzymes (e.g., amylase), provide structural support (e.g., collagen), mount an immune response (e.g., antibodies), and function in signaling (e.g., receptors). These diverse functions highlight the importance of proteins in cellular activities.</p> Signup and view all the answers

How do the different arrangements of atoms in structural isomers affect their physical and chemical properties?

<p>Different bonding arrangements in structural isomers lead to variations in molecular shape and polarity, altering physical properties like boiling point and solubility, as well as chemical reactivity.</p> Signup and view all the answers

Explain how the properties of water, specifically its high specific heat and cohesion, contribute to maintaining stable environmental conditions for aquatic organisms.

<p>Water's high specific heat helps stabilize temperature by absorbing significant heat with minimal temperature change, while cohesion supports surface tension and habitat formation, both crucial for aquatic life.</p> Signup and view all the answers

Describe the role of the carbonyl group (C=O) in distinguishing between aldehydes and ketones, and how this structural difference can affect their reactivity.

<p>The carbonyl group is at the end of the carbon chain in aldehydes and within the chain in ketones. This difference affects reactivity, as aldehydes are generally more reactive due to the accessibility of the carbonyl carbon.</p> Signup and view all the answers

Outline the process of a condensation reaction in the formation of a polypeptide from amino acids, and specify the type of bond that is formed.

<p>During condensation, amino acids join by forming a peptide bond between the carboxyl group of one amino acid and the amino group of another, releasing a water molecule in the process.</p> Signup and view all the answers

How does the arrangement of cis and trans isomers around a double bond impact the overall shape and function of a lipid molecule, such as a fatty acid?

<p><em>Cis</em> isomers introduce a bend in the fatty acid chain, disrupting tight packing and lowering melting points, while <em>trans</em> isomers allow for a more linear structure that packs tightly, increasing melting points.</p> Signup and view all the answers

Explain how the unique properties of water support the transport of nutrients within plants from the roots to the leaves against gravity.

<p>Water's cohesion creates a tension that pulls water upwards, while adhesion helps water adhere to the walls of the xylem, counteracting gravity and facilitating nutrient transport throughout the plant.</p> Signup and view all the answers

Describe how the structure of a monosaccharide, such as glucose, relates to its function as a primary energy source in cells.

<p>Glucose's structure, with its multiple hydroxyl groups, allows it to be highly soluble in water for easy transport and metabolism. Its carbon-hydrogen bonds provide a source of readily available energy when broken down through cellular respiration.</p> Signup and view all the answers

How do chiral isomers differ, and why is this difference significant in the context of enzyme-substrate interactions in biological systems?

<p>Chiral isomers are mirror images that cannot be superimposed. This is significant because enzymes are highly specific and can only bind to one isomer, impacting biological reactions.</p> Signup and view all the answers

Flashcards

Proteins

Molecules involved in enzymatic activity, structural support, immune response, and signaling.

Lipids

Molecules including fats, oils, waxes, and phospholipids that store energy and form cell membranes.

DNA (Deoxyribonucleic Acid)

Molecule that stores genetic information, a double-stranded helix with deoxyribose sugar and thymine (T).

RNA (Ribonucleic Acid)

Molecule involved in protein synthesis, single-stranded with ribose sugar and uracil (U).

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Condensation/Dehydration Synthesis

Reaction that bonds monomers by releasing water.

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Functional Groups

Clusters of atoms that determine a molecule's chemical properties and reactivity.

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Isomers

Molecules with the same chemical formula but different structures.

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Structural Isomers

Same formula, different bonding arrangements.

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Geometric Isomers

Isomers with groups on the same side (cis) or opposite sides (trans) of a double bond.

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Chiral Isomers

Mirror-image molecules that can't be superimposed.

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Cohesion (Water)

Water sticking to itself due to hydrogen bonds.

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Adhesion (Water)

Water sticking to other surfaces.

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Monomers

Small molecules that bond to form polymers.

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Study Notes

Functional Groups in Biological Molecules

  • Functional groups are clusters of atoms that confer specific chemical properties and reactivity to molecules.
  • The amino group (-NH₂) is found in amino acids.
  • The carboxyl group (-COOH) is found in amino acids and fatty acids.
  • The hydroxyl group (-OH) is found in alcohols and sugars and increases solubility in water due to its polarity.
  • The carbonyl group (C=O) includes aldehydes found at the end of a carbon chain and ketones found in the middle.
  • Functional groups determine the structure and function of biological molecules.

Types of Isomers

  • Isomers have the same chemical formula but different structural arrangements.
  • Structural isomers share a formula but differ in bonding arrangements.
    • Glucose and fructose are examples of structural isomers.
  • Geometric isomers occur with double bonds.
    • Cis isomers have groups on the same side.
    • Trans isomers have groups on opposite sides.
  • Chiral (optical) isomers are mirror-image molecules that cannot be superimposed.
    • They occur when a carbon atom bonds to four different groups.

Properties of Water

  • Water's properties are essential for life.
  • Cohesion is when water molecules stick together due to hydrogen bonding.
  • Adhesion is water's ability to stick to other surfaces.
  • Water has a high specific heat, meaning it can absorb a lot of heat before its temperature changes.
  • Water is a universal solvent, dissolving many polar and ionic compounds.
  • Water is less dense as a solid (ice) than as a liquid.

Monomers and Polymers

  • Monomers are small molecules that bond to form polymers.
  • Condensation reactions link monomers to form polymers.
  • Hydrolysis breaks down polymers into monomers.
  • Carbohydrate monomers are monosaccharides (e.g., glucose).
    • Carbohydrate polymers are polysaccharides (e.g., starch, cellulose).
    • Carbohydrates are linked by glycosidic bonds.
  • Protein monomers are amino acids.
    • Protein polymers are polypeptides.
    • Proteins are linked by peptide bonds.
    • During condensation reactions, amino acids join and release water.
  • Nucleic acid monomers are nucleotides (e.g., adenine, thymine).
    • Nucleic acid polymers are DNA or RNA.
    • Nucleic acids are linked by phosphodiester bonds.
  • Lipid monomers are fatty acids and glycerol.
    • Lipid polymers are triglycerides.
    • Lipids are linked by ester bonds.

Carbohydrates, Proteins, and Lipids

  • Carbohydrates provide energy and structural support.
    • Monosaccharides, disaccharides (e.g., sucrose), and polysaccharides (e.g., starch, cellulose) are types of Carbohydrates.
  • Proteins are made of amino acids.
    • They serve in enzymatic activity, structural support, immune response, and signaling.
    • Proteins are linked by peptide bonds
  • Lipids include fats, oils, waxes, and phospholipids.
    • They store energy, provide insulation, and make up cell membranes.
    • Lipids form from fatty acids and glycerol.

Nucleic Acids

  • DNA (Deoxyribonucleic Acid) stores genetic information.
    • It is a double-stranded helix with deoxyribose sugar and thymine (T).
    • Phosphodiester bonds form the backbone.
    • Hydrogen bonds pair the nitrogen bases (A-T, C-G).
  • RNA (Ribonucleic Acid) is involved in protein synthesis.
    • It is single-stranded with ribose sugar and uracil (U) replacing thymine.
    • RNA functions in gene expression.

Carbon Chemistry

  • Carbon can form up to four bonds (single, double, or triple bonds).
    • It can create long chains, branches, or rings (e.g., glucose is a carbon ring).
  • Saturated hydrocarbons have single bonds.
  • Unsaturated hydrocarbons contain double or triple bonds.

Key Reactions

  • Condensation/dehydration synthesis bonds monomers, releasing water.
    • An example is peptide bonds in proteins.
  • Hydrolysis breaks polymers into monomers by adding water.
    • An example is breaking down starch into glucose.

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Description

Explore functional groups like amino, carboxyl, and hydroxyl, which dictate molecule properties. Learn about structural, geometric (cis-trans), and chiral isomers, highlighting their distinct arrangements despite identical formulas. Understand how these variations impact biological functions.

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