Podcast
Questions and Answers
What is the primary purpose of the Barcode Index Number (BIN) System?
What is the primary purpose of the Barcode Index Number (BIN) System?
- To classify species solely based on their physical characteristics
- To document geographical distribution of species
- To enhance morphological assessments of species
- To provide a DNA-based registry for all animal species (correct)
How did the speed of DNA barcoding compare to traditional taxonomy in documenting species?
How did the speed of DNA barcoding compare to traditional taxonomy in documenting species?
- Traditional taxonomy is quicker, requiring only a decade for large numbers of species
- DNA barcoding can document species in twelve years compared to hundreds of years for traditional taxonomy (correct)
- Both methods take approximately the same time to document species
- DNA barcoding is slower and less efficient than traditional methods
What does the current estimate suggest regarding the number of species on Earth?
What does the current estimate suggest regarding the number of species on Earth?
- Approximately 1 million species
- Around 8.7 million species, with a possible variance of 1-3 million (correct)
- Roughly 15 million species documented and verified
- About 5 million species, mostly undiscovered
What contribution does citizen science, such as platforms like iNaturalist, make to biodiversity knowledge?
What contribution does citizen science, such as platforms like iNaturalist, make to biodiversity knowledge?
Who is recognized for initiating the modern taxonomical approach in biology?
Who is recognized for initiating the modern taxonomical approach in biology?
What does the content suggest about the total DNA sampled from microbial life on Earth?
What does the content suggest about the total DNA sampled from microbial life on Earth?
What is the estimated range of bacterial and archaeal species on the planet?
What is the estimated range of bacterial and archaeal species on the planet?
Which of the following best describes the concept of DNA barcoding mentioned in the content?
Which of the following best describes the concept of DNA barcoding mentioned in the content?
What is the purpose of the Barcode Index Number (BIN) system discussed in the content?
What is the purpose of the Barcode Index Number (BIN) system discussed in the content?
What is the total number of known animal species estimated to be represented in the content?
What is the total number of known animal species estimated to be represented in the content?
Which of the following groups is mentioned as part of the estimated diversity of known species?
Which of the following groups is mentioned as part of the estimated diversity of known species?
What does the content indicate about the COI divergence in birds?
What does the content indicate about the COI divergence in birds?
What statement about species registration is implied in the content?
What statement about species registration is implied in the content?
What is a common method used for estimating species diversity in microbial communities?
What is a common method used for estimating species diversity in microbial communities?
Which tool allows for the automated registration of species through user-uploaded photos?
Which tool allows for the automated registration of species through user-uploaded photos?
What classification system was presented by Whittaker in 1969?
What classification system was presented by Whittaker in 1969?
What aspect of biodiversity was highlighted through the concept of 'bias' in species data collection?
What aspect of biodiversity was highlighted through the concept of 'bias' in species data collection?
Which of the following is a primary purpose of DNA barcoding?
Which of the following is a primary purpose of DNA barcoding?
Which type of organism is often overlooked in species estimations compared to more visible forms of life?
Which type of organism is often overlooked in species estimations compared to more visible forms of life?
What is a major limitation of traditional species estimation methods?
What is a major limitation of traditional species estimation methods?
How does iNaturalist use artificial intelligence in its platform?
How does iNaturalist use artificial intelligence in its platform?
Flashcards
Biodiversity Automation
Biodiversity Automation
Using technology to improve the efficiency of recording and cataloging diverse species, such as DNA-based registries.
Barcode Index Number (BIN) System
Barcode Index Number (BIN) System
A DNA-based registry for all animal species.
DNA barcoding
DNA barcoding
Using short segments of DNA to identify species.
Morphological-descriptive assessment
Morphological-descriptive assessment
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Citizen science
Citizen science
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Species diversity
Species diversity
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iNaturalist
iNaturalist
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Measuring species diversity
Measuring species diversity
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Species Scape
Species Scape
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Whittaker's Five Kingdom Classification
Whittaker's Five Kingdom Classification
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Evolutionary tree
Evolutionary tree
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Data collection bias
Data collection bias
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Taxonomic group
Taxonomic group
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Microbial Diversity
Microbial Diversity
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Planetary Biodiversity
Planetary Biodiversity
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Species Registration
Species Registration
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Barcode Index Number (BIN)
Barcode Index Number (BIN)
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COI Divergence
COI Divergence
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Resolution
Resolution
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Automating Species Registration
Automating Species Registration
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Study Notes
Measuring Species Diversity
- Scientists estimate the total number of species on Earth to be around 8.7 million, with a margin of error of 1.3 million.
- This estimate includes 6.5 million species on land and 2.2 million in oceans.
- The most precise calculation of species counts comes from the Census of Marine Life.
- Estimates of the total number of species range from 5 to possibly 10 million or more, highlighting significant undiscovered species.
- Many species, notably those in remote or unexplored areas, remain undiscovered and undescribed by science.
- Researchers are continually discovering and describing new species regularly, thus the current total is likely to increase.
- This suggests that a significant portion of species on Earth and in the ocean remain unknown.
- Taxonomic and biodiversity research are constantly evolving to offer updated or more accurate information.
Tools and Technologies
- iNaturalist:
- A citizen science platform where people can document and share observations of plants and animals, aiding in species discovery.
- Users take photos of organisms and upload them to the platform, facilitating species identification.
- Artificial intelligence is used to make initial identifications and the platform can benefit greatly from more users contributing photos and data.
- LifeScanner:
- A tool for robotic discovery of small invertebrates using machine learning methods.
- GBIF.org and EOL photos in Flickr:
- Online resources offering extensive biodiversity data, including millions of records.
- Used with additional resources, a powerful tool for comprehensive data on species.
- Facebook 2013:
- Demonstrates the reach of observations through an existing, powerful tool, like social media.
- Barcodes:
- A technology that helps generate unique identifiers.
- Only a few numbers are needed to generate unique identifiers (e.g. 10 x 10 x 10 x 10 = 10,000).
- Used for quick identification of species.
Existing Species Datasets and Taxonomies
- Scientists have catalogued approximately 1.7 million species to date, which is a relatively small subset of the total.
- The global number of species on Earth is 5 ± 3 million.
- This figure considers known species (1.5 million) and estimates the number likely to exist.
- Existing databases indicate there are more taxonomists describing species now than ever before.
- The increase in taxonomists outpaces the rate of species description, suggesting ongoing efforts to catalogue species are impactful.
- Species survival in secondary habitats are delaying extinctions.
- Extinction rates are poorly understood, varying from 0.01 to 1%, at most 5%, per decade.
Bio-Diversity Distribution
- There are significant disparities in the number of species catalogued across various taxa, with some groups far more documented than others.
- The distribution of species on the map and various databases showcases how the numbers for these species are quite different.
- Some groups show occurrences excess, others show occurrences shortfall.
Evolutionary Trees
- Evolutionary trees show evolutionary relationships between different organisms based on ribosomal RNA sequences (and genetics).
- Shows how various species relate to one another based on ancestry.
- Allows scientists to analyze similar characteristics, to determine their evolutionary ties.
Taxonomic Classification
- Biologists have established standardized methods for classifying species, based on higher taxonomic classification (e.g., phylum, class, etc.)
- This method helps in the estimation of the total number of species in a particular group efficiently to provide insights to the totality of the existing species on Earth.
- The five-kingdom classification based on cell structure and nutrition (plants, fungi, animals, protists and monera) reflects the historical view of the nature and diversity of life on our planet.
Additional Notes
- Estimated numbers of species are continuing to evolve as more data and research emerge.
- Continued exploration and taxonomy are vital for a more complete understanding of Earth's biodiversity.
- The current knowledge of species diversity is incomplete and requires more efforts and resources to be address.
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Description
Test your knowledge on the Barcode Index Number (BIN) System and its role in biodiversity documentation. Explore the comparison between DNA barcoding and traditional taxonomy, along with the importance of citizen science in enhancing our understanding of species diversity. Dive into estimates of total species and contributions to taxonomy.