Bio Exam 1 Study Notes

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Questions and Answers

How can carbon skeletons vary in organic molecules?

  • They can vary in length.
  • They can exhibit different branching structures.
  • They can contain different functional groups.
  • All of the above. (correct)

Which of the following functional groups is characterized by the presence of a sulfhydryl group?

  • Carboxylic Acid
  • Phosphate
  • Thiol (correct)
  • Amine

What is the primary energy currency of the cell?

  • ADP
  • ATP (correct)
  • Glucose
  • DNA

What happens to ATP when it loses one phosphate group?

<p>It converts into ADP and releases energy. (B)</p> Signup and view all the answers

Which of the following statements accurately describes the role of methylation in gene expression?

<p>Methylation suppresses gene expression. (C)</p> Signup and view all the answers

What is the role of acetyl groups in gene expression?

<p>They activate gene expression. (D)</p> Signup and view all the answers

Which of the following functional groups can act as a base?

<p>Amine (B)</p> Signup and view all the answers

What is the difference between ATP and ADP?

<p>ATP has a higher energy content than ADP. (B)</p> Signup and view all the answers

Which chemical group is most likely to be responsible for an organic molecule behaving as a base?

<p>Amino (C)</p> Signup and view all the answers

Which of the following statements about ATP/ADP is true?

<p>ATP can have four negative charges. (A)</p> Signup and view all the answers

What is the importance of carbon's valence in the formation of organic molecules?

<p>Carbon's valence allows it to form four covalent bonds with other atoms, which is crucial for building the skeletons of organic molecules. (B)</p> Signup and view all the answers

Which of the following pairs of functional groups are most likely to be involved in forming an ionic bond in a molecule?

<p>Amino (-NH<del>2</del>) and Carboxyl group (-COOH) (C)</p> Signup and view all the answers

Which of the following correctly describes cis-trans isomers?

<p>Cis-trans isomers differ in the arrangement of atoms around a double bond. (D)</p> Signup and view all the answers

Which of the following best describes the role of the sulfhydryl group in protein structure?

<p>It is involved in the formation of disulfide bridges, which help stabilize the protein's structure. (A)</p> Signup and view all the answers

Out of hydroxyl, amino, and carboxyl, which group is most likely to gain a proton (H+)?

<p>Amino (C)</p> Signup and view all the answers

Why might it be essential to use only one form of enantiomer for a drug?

<p>All of the above are reasons why using only one enantiomer might be crucial for a drug. (D)</p> Signup and view all the answers

What is the molecular mass of a substance that contains 1 mole of the substance?

<p>The mass of 6.02 x 10^23^ molecules of the substance (A)</p> Signup and view all the answers

Which of the following is a characteristic of a strong acid?

<p>It completely dissociates in solution. (A)</p> Signup and view all the answers

What defines a base in biological terms?

<p>A substance that accepts hydrogen ions from a solution (B)</p> Signup and view all the answers

Which of the following correctly describes the relationship between pH and hydrogen ion concentration?

<p>A lower pH indicates a higher hydrogen ion concentration. (B)</p> Signup and view all the answers

What is the significance of a disulfide bridge in biological molecules?

<p>It is a strong bond that helps maintain the structure of DNA. (D)</p> Signup and view all the answers

What is the difference between cis and trans isomers?

<p>Cis isomers have substituents on the same side of a double bond, while trans isomers have them on opposite sides. (A)</p> Signup and view all the answers

What is the role of buffers in biological environments?

<p>They maintain a constant pH by accepting or donating hydrogen ions. (C)</p> Signup and view all the answers

How is the pH scale structured?

<p>The pH scale is logarithmic, meaning that a one-unit change represents a tenfold change in acidity. (A), The pH scale ranges from 0 to 14, with 7 being neutral. (C)</p> Signup and view all the answers

Flashcards

Methyl group

A chemical group (-CH2) that regulates DNA.

Carbon's atomic number

Carbon's atomic number is 6, indicating it has 6 electrons.

Valence electrons of carbon

Carbon has 4 valence electrons and can form 4 bonds.

Sulfhydryl group

A chemical group (-SH) that stabilizes protein structure.

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Cis-trans isomers

Isomers that differ in arrangement due to a double bond between carbon atoms.

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ATP function

ATP stores energy for cellular processes by releasing a phosphate group.

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Enantiomers

Mirror-image isomers of a molecule that can have different effects.

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Weak bases

Molecules like R-NH2 that can accept protons.

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Carbon skeleton variations

Carbon skeletons can vary in length, branching, double bond position, and rings.

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L-dopa

A drug used to treat Parkinson's disease.

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Role of methylation

Methylation suppresses gene expression, preventing certain genes from being expressed.

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Acetyl groups in gene expression

Acetyl groups regulate or activate gene expression, turning on specific genes.

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ATP

Adenosine triphosphate is the primary energy currency of the cell.

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ADP

Adenosine diphosphate formed when ATP loses one phosphate group.

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Energy conversion from food

Energy from food must be converted into ATP for cellular use.

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Inorganic phosphate

A phosphate group that is not bound to organic molecules, vital in energy transfer.

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Molecular Mass

The sum of the atomic masses of all atoms in a molecule.

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Mole

A unit measuring the number of molecules, specifically 6.02 x 10^23 molecules.

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Molarity

The concentration of a solution expressed as moles of solute per liter of solution.

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pH Scale

Ranges from 0 to 14; indicates acidity (less than 7) or basicity (greater than 7).

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Acids and Bases

Acids donate hydrogen ions; bases accept hydrogen ions in solutions.

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Dissociation Constant of Water

At 25 degrees Celsius, it is 10^-14, equal concentrations of H+ and OH- in pure water.

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Hydrocarbons

Organic compounds made only of hydrogen and carbon; can form chains or rings.

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Cis and Trans Isomers

Cis has substituents on the same side of a double bond; trans has them on opposite sides.

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Study Notes

Bio Exam 1 Study Notes

  • Chemical group regulating DNA: Methyl group (-CH3)
  • Element always in organic chemistry: Carbon
  • Carbon's atomic number: 6
  • Carbon's valence electrons: 4, forming 4 bonds
  • Chemical group stabilizing proteins: Sulfhydryl group (-SH)
  • Weak base in pharmaceuticals: R-NH2
  • Double bond isomers: Cis-trans isomers
  • ATP importance: Stores potential to react with water, releasing energy for cellular processes
  • Six most essential elements: Carbon, nitrogen, oxygen, hydrogen, phosphorus, sulfur
  • Organic base indicator: Amino group
  • Organic acid indicator: Carboxyl group (-COOH)
  • Mirror-image isomers: Enantiomers
  • Weak acid: R-COOH
  • Hydrocarbons characteristics: Hydrophobic, nonpolar, store energy
  • ATP formation: Three phosphate groups covalently bonded to adenosine
  • Amino acid components: Both -COOH and -NH2
  • Enantiomers importance: One enantiomer may be effective, the other ineffective or toxic (drug production)
  • ATP charges: Can have four negative charges
  • Proton gaining group: Amino group
  • Carbon's role in molecules: Versatile in forming skeletons for organic molecules
  • Isomers difference: Different arrangements or bonding of atoms
  • Cis-trans isomers difference: Differ in spatial arrangements around inflexible double bonds
  • L-dopa use: Treats Parkinson's disease
  • R-dopa's effect: Has no effect on Parkinson's disease
  • Organic phosphate function: Contributes negative charge
  • Amine function: Acts as a base
  • Thiol function: Forms disulfide bonds
  • Aldehyde function: May be a structural isomer of a ketone
  • Carboxylic acid function: Acts as an acid
  • Alcohol function: Polar, making compounds more soluble in water
  • Methyl group structure: Carbon bonded to three hydrogen atoms
  • Methylation's effect: Suppresses gene expression
  • Human chromosomes: 46 chromosomes
  • Gene expression prevalence: Not all genes are expressed in every cell
  • Acetyl groups' function: Unregulate or activate gene expression
  • ATP energy function: Primary energy currency, fueling cellular processes
  • Energy harvesting from food: Converted into ATP for cell use
  • ATP reaction with water: Loses a phosphate group, converting to ADP and releasing energy
  • ADP definition: Adenosine diphosphate

Other Important Concepts

  • Inorganic phosphate: Phosphate that isn't attached to a carbon-containing molecule
  • Molecular mass: Sum of all atomic masses in a molecule
  • Mole definition: 6.02 x 1023 molecules
  • Measuring moles: Mass corresponding to molecular mass in grams, dissolved in a specific solvent volume
  • Molarity: Concentration; moles of solute per liter of solution
  • Water formula weight: 18 grams
  • pH and hydrogen ions: Lower pH indicates higher hydrogen ion concentration (more acidic)
  • Acid definition: Donates hydrogen ions
  • Base definition: Accepts hydrogen ions
  • Strong vs. weak acids: Strong acids dissociate completely; weak acids partially dissociate
  • pH scale: Ranges from 0-14; 7 is neutral
  • Dissociation constant of water: 10-14
  • Buffers: Minimize pH changes by donating or accepting hydrogen ions, maintaining stable conditions
  • Hydrocarbons: Organic compounds composed of only hydrogen and carbon, typically forming chains or rings
  • Structural isomers: Same molecular formula, different atomic arrangements
  • Cis-trans isomers: Differ in spatial arrangement around double bonds
  • Disulfide bridges: Important bonds holding DNA in higher-order structures involving sulfur atoms
  • Phosphate groups origins: Commonly found in ATP (adenosine triphosphate) and ADP (adenosine diphosphate)
  • Phosphate group components: One phosphorus atom and four oxygen atoms (one being double bonded)

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