Summary

This document reviews fundamental concepts in diversity, encompassing morphology, phylogeny, species concepts, and provides details about prokaryotic cells. Notably, it outlines anatomical and physiological evidence for relationships and describes phylogenetic trees. It includes information on biological species concepts, binomial nomenclature, and taxonomic categories, with specific attention to species diversity, genetic diversity, and ecosystem diversity. The document then focuses on characteristics of prokaryotic cells like archaea and bacteria, with notable mention of their structures and classifications.

Full Transcript

***[DIVERSITY EXAM REVIEW:]*** **Morphology:** Structure & form of organisms **Phylogeny:** Evolutionary history of a species **Morphological species concept:** Compares measurements & description of similar organisms. **Biological species concept:** If 2 individual organisms can mate & produce...

***[DIVERSITY EXAM REVIEW:]*** **Morphology:** Structure & form of organisms **Phylogeny:** Evolutionary history of a species **Morphological species concept:** Compares measurements & description of similar organisms. **Biological species concept:** If 2 individual organisms can mate & produce offspring under natural circumstances, they belong to the same species. **Phylogenetic species concept:** - - - - **Binomial Nomenclature:** - - - - - - **Taxonomic Categories:** Groupings arranged in a hierarchy **Less Specific →**Domain, Kingdom, Phylum, Class, Order, Family, Genus, Species **←More Specific** **\*Dr Kevin Phil Came Over For Good Soup\*** **Domain-** Bacteria, Archaea, Eukaryota **Kingdom-** Animalia, Plantae, Fungi, Protista, Archaea & Bacteria **Anatomical Evidence of Relationships:** Remember morphology is size, shape & other physical features of organisms. Anatomy deals with structure & form - including internal systems. Helps scientists determine evolutionary relationships among species. **Physiological Evidence of Relationships:** Physiology- deals with functions of the organism. Comparing proteins among different species, genetic similarity or difference can be determined. **DNA Evidence of Relationships:** - Genes are sections of the DNA. DNA sequences can be compared among species. **Phylogenetic Trees:** Scientists use these trees to represent a hypothesis about the evolutionary relationships among groups of organisms. **Clades:** Sections of the phylogenetic trait that allow you to see descendants of common ancestors. **Species Diversity:** Variety & abundance of species in a given area. **Genetic Diversity:** Variety of heritable genes in a population of interbreeding individuals. **Ecosystem Diversity:** Variety of ecosystems in biosphere. **Ecosystem Service:** Services that ecosystems provide [Ecosystem Service]: Water Supply → EX. Irrigation, water for industry Wilderness → EX. Habitat for wildlife Food Production → EX. Crops, livestock **[Characteristics of prokaryotic cells (Archaea & Bacteria)]** 1\. Single celled 2\. DNA not surrounded by a membrane (all are prokaryotes) 3\. Organelles not surrounded by a membrane 4\. Small (less than 2 micrometers) 5\. Hard to tell them apart **[Structure of prokaryotic cells]** \- Smallest of organisms \- Have cell wall for structural support & protection \- DNA forms a **ring called Plasmid** instead of a strand \- Some bacteria have **Flagella** **[Important Structures:]** **Capsule** increases virulence (ability to cause disease) \- Allows prokaryotes to adhere (stick) to surfaces \- Protects it from being "eaten" by WBC (white blood cells) \- Contains water to protect it from dehydration **Cell Wall:** \- Made of peptidoglycan or pseudopeptidoglycan & outer membrane (proteins + sugars.. pseudo→ fake) \- Provide rigidity support & protection **Plasma membrane:** \- Controls movement of substances in & out **Nucleoid Region:** \- Contains DNA, several regions & RNA **Pili:** \- Hair-like structures on bacteria surface \- Diff ones have diff functions (eg. motility, attachment, exchange of genetic info) **Flagella:** \- Whip like structure used for movement ***[Bacterial shapes & groupings]*** **Coccus** \- Spherical cell → EX. Streptococcus (causes throat infections) **Bacillus** \- Rod shaped cell → EX. E. Coli (causes diarrhea among other things) **Spirillum** \- Spiral shaped cell \- Often found in aquatic environments → EX. Botulism (attacks nerves, cause muscle paralysis) **Prefixes (describe how bacteria live):** **Mono-** Live as single cells **Diplo-** Live in pairs **Strepto-** Live in linear chains **Staphylo-** Live in grapelike clusters **Differences** Bacteria Archaea ---------------------------------------------------------------------------------------------------- ------------------------------------------------- Bacterial cell membranes contain Bilipid layer of phospholipids & cell walls contain peptidoglycan Archaea cells do not. Bacteria can cause disease Archaea cannot.... Archaea resemble eukaryotes more than bacteria. Has Cilia Has Pili Has Flagellum Has Flagella **[Unique characteristics of Archaea]** \- Large \# are **extremophiles-** they live in extreme conditions \- Thermophiles: Live in extremely hot environments \- Halophiles: Live in salty environments \- Psychrophiles: Live in extremely cold environments **More characteristics:** \- Include methanogens producing energy in O2 environments. Produce **methane** in process. \- Can also live in less extreme places like oceans, marshlands, animals - including humans \- Are mutualistic or commercial (they work together with other organisms) **[Bacteria Characteristics:]** They differ based on their \- Cell wall \- Movement \- Metabolism ***Cell Wall : Gram Stain*** \- Bacteria are classified by their reaction to a dye made of crystal violet & iodine (gram stain) \- Bacteria that have membrane that absorb this stain a gram positive \- Bacteria that don't stain are gram negative \- Gram negative bacteria are usually the most pathogenic & cause serious disease like typhoid, meningitis, & Pneumonia **Movement:** **Flagellum:** Tail like structure that whips around to propel the bacterium **Cilia:** Small hair-like projections surrounding cell that help it "swim" **Non-Motile \~** Sticky cilia like that keep bacterium from moving **Nutrition:** Bacteria can be either autotrophs or heterotrophs **Bacterial Reproduction:** **Binary Fission:** **Asexual reproduction**. Bacteria copies its DNA and splits into 2 daughter cells. Not a lot of genetic variation, but lots of opportunity for mutations. **Conjugation:** **Transfer of genetic information.** Plasmids provide bacteria with genetic advantages. Cells can pass a copy of a plasmid. Allows for some genetic variation. **Endospore formation:** **Protection & dispersal of genetic info.** ***[Viruses:]*** **What is a virus?:** \- Infectious, non-living, non-cellular particles \- Do not contain cytoplasm \- Do not produce or use energy \- Cannot grow or reproduce on their own (need a host cell) \- DO have genetic material which uses other cells (host cells) to create "virus copies" **Size:** less that 0.1 micrometers in diameter **Structure of Virion (virus particle):** **Capsid (or head)-** protein coat protecting genetic material **Genetic Material-** RNA or DNA core **An Envelope (some viruses)-** created when virus leaves a host cell & part of host cell membrane wraps around the virus. **Basic Structure of a virus:** Nucleic acid (DNA or RNA) enclosed in a protein coat (capsid). **Is a virus alive?** NO. **Replication:** Lytic cycle & Lysogenic cycle **What is a Protist?:** Eukaryotic organism, usually unicellular. **Characteristics of protists:** \- Most are unicellular \- Grouped in this kingdom because they don't fit in anywhere else \- Some live as parasites \- Most reproduce through Binary fission. **The 3 Groups:\ **Animal-like protist, Fungus-like protist, Plant-like protist **Characteristics of Fungi:** \- Most are multicellular \- Cells are Eukaryotic \- Cells surrounded by a cell wall made of **chitin** (not cellulose) \- Asexual & Sexual reproduction \- Heterotrophic, most are saprophytes (feed off of dead organic matter) \- Many are stationary & found in soil **Important Examples:** Bread mould, yeast, mushrooms **Structure:** Fungal tissues are specialized for **Absorption** of nutrients & **Reproduction** \- Absorption takes place in mycelia (mesh of branching, microscopic filaments that appear fuzzy) \- Each filament (pieces of branch) called a hypha grows in & around a food source. \- Secretes (produces) digestive enzymes & absorbs broken down nutrients into hyphae. \- Therefore, fungal digestion is considered extracellular ***[Plants:]*** **Characteristics:** \- Multicellular organisms \- Autotrophs & make their own carbohydrates using photosynthesis \- Early plants are all non-vascular \- Small & grow close to ground & near water (have no transport system) \- Reproduce using spores \- Today's plants are vascular **Gymnosperms:** Needle-like leaves & naked seeds found on cones **Angiosperms:** Flowering plants with seeds found within fruit, can be either monocot or dicot **Tissue Types:** \- Vascular plant tissues \- Meristematic tissue \- Dermal tissue \- Ground tissue \- Vascular tissue **Monocot VS Dicot** **Monocot:** One cotyledon (area of started nutrients) within seed that is used by embryo until it grows & can carry out photosynthesis. **Dicot:** Has two cotyledons in its seeds. ***[Animal Kingdom:]*** **Characteristics:** \- Heterotrophic \- Multicellular eukaryotes \- Lack cell walls \- Use oxygen

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