Module 11.2 - Viruses

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Questions and Answers

Which cellular process is activated by engaging apoptotic receptors?

  • Cell differentiation
  • Cell division
  • Autophagy
  • Apoptosis (correct)

What is the primary focus of virology according to the text?

  • Cell biology (correct)
  • Genetics
  • Biochemistry
  • Immunology

How do non-enveloped and enveloped viruses enter cells?

  • Pinocytosis
  • Endocytosis (correct)
  • Exocytosis
  • Phagocytosis

What is critical for uncoating or disassembling viruses within cells?

<p>$pH$ transitions (D)</p> Signup and view all the answers

Where does viral replication and assembly primarily occur?

<p>$Cytosol$ (D)</p> Signup and view all the answers

How do viruses achieve exit from the endosome into the cytosol?

<p>Through multiple mechanisms (C)</p> Signup and view all the answers

What mechanism do viruses use to mimic apoptotic fragments for efficient uptake?

<p>$Cloaking$ mechanism (A)</p> Signup and view all the answers

Which transcriptional targets inhibit host cell receptors receiving pro-inflammatory signals from neighbouring cells?

<p>Targets within innate immune pathways (C)</p> Signup and view all the answers

What are some transcriptional targets that are secreted factors for neighbouring cells?

<p>Anti-inflammatory factors (D)</p> Signup and view all the answers

Which class of viral fusion proteins can be activated upon docking to cell surface receptors or require pH transitions to become activated?

<p>Class I, II, and III (D)</p> Signup and view all the answers

Where does viral genome replication typically occur for RNA viruses?

<p>Cytosol (D)</p> Signup and view all the answers

How does the egress from the nucleus of enveloped viruses occur?

<p>Distinct mechanisms (C)</p> Signup and view all the answers

Where does Herpesvirus bud into?

<p>Perinuclear space (A)</p> Signup and view all the answers

What is the target of the vaccine for SARS-CoV-2?

<p>Spike protein (A)</p> Signup and view all the answers

Which entry pathways for SARS-CoV-2 require ACE2 receptor binding?

<p>Endosomal entry and cell surface entry (C)</p> Signup and view all the answers

What is required for S2 essential for viral fusion in SARS-CoV-2?

<p>Cleavage event (D)</p> Signup and view all the answers

How does influenza virus infection involve viral glycoproteins?

<p>Attaching to host epithelial cells (D)</p> Signup and view all the answers

What is a characteristic of rotavirus, a non-enveloped virus?

<p>Causes acute gastroenteritis (C)</p> Signup and view all the answers

How does rotavirus enter cells?

<p>Through clathrin and non-clathrin mediated endocytosis (B)</p> Signup and view all the answers

What explains viral protein interaction with the endosomal membrane during viral escape?

<p>&quot;Carpet model&quot; and &quot;pore formation&quot; model (B)</p> Signup and view all the answers

What was identified as major determinants of rotavirus infection, linking the viral life cycle with host cell biological processes?

<p>AMPK and vacuolar ATP synthase (A)</p> Signup and view all the answers

How does picornavirus RNA exit the capsid?

<p>Through a pore, driven by a pH change and dissociation of viral proteins (D)</p> Signup and view all the answers

What do over 75,000 viral genomes code for?

<p>2 to 2000 proteins (D)</p> Signup and view all the answers

Which type of life cycle do NOT ALL bacteriophages go into?

<p>Lytic pathway (C)</p> Signup and view all the answers

What results from the integration of a phage genome into the bacterial genome?

<p>Reproduction of phages and lysis of the cell host (D)</p> Signup and view all the answers

What do bacteriophages inject through the bacterial wall?

<p>DNA (C)</p> Signup and view all the answers

What resulted in the identification of the Crispr-Cas9 gene editing system?

<p>Bacterial anti-viral immune system (B)</p> Signup and view all the answers

What makes phage therapy very promising as an antibacterial treatment?

<p>High specificity and adaptability (D)</p> Signup and view all the answers

What can phages re-evolve to overcome bacterial anti-viral strategies?

<p>Enzymes to degrade coats or modifications (A)</p> Signup and view all the answers

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Study Notes

Viral Life Cycle and Host Interaction

  • Phages are abundant and do not disturb the microbiome, making them a potential alternative to antibiotics
  • Phages can self-replicate and lyse cells, making phage therapy an efficient system to improve antibiotic potency
  • Over 75,000 viral genomes have been sequenced, coding for 2 to 2000 proteins
  • Influenza virus infection involves viral glycoproteins attaching to host epithelial cells, followed by viral RNA and protein assembly into new virions
  • Animal viruses can be enveloped or non-enveloped, with different characteristics and entry mechanisms
  • Rotavirus, a non-enveloped virus, causes acute gastroenteritis and led to the death of ~453,000 children under 5 in 2008
  • Rotavirus enters cells through clathrin and non-clathrin mediated endocytosis, requiring specific cellular factors for viral exit from the endosome
  • Viral exit from the endosome generally relies on pH transitions, which can open helical proteins in capsid proteins or activate viral proteases
  • The "carpet model" and "pore formation" model explain viral protein interaction with the endosomal membrane during viral escape
  • Picornavirus RNA exits the capsid through a pore, driven by a pH change and dissociation of viral proteins
  • A genome-wide siRNA screen identified host genes that either increased or decreased rotavirus infection, linking the viral life cycle with host cell biological processes
  • AMPK and vacuolar ATP synthase were identified as major determinants of rotavirus infection, with links to endosomal acidification and mTOR signaling.

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