Podcast
Questions and Answers
What is the final product of information flow, according to the central dogma?
What is the final product of information flow, according to the central dogma?
- Protein (correct)
- DNA
- mRNA
- RNA
In prokaryotes, transcription requires the binding of general transcription factors to initiate the process.
In prokaryotes, transcription requires the binding of general transcription factors to initiate the process.
False (B)
What type of RNA makes up the structural and catalytic core of ribosomes?
What type of RNA makes up the structural and catalytic core of ribosomes?
rRNA
DNA-encoded information is first ________ into an RNA intermediary by RNA polymerase.
DNA-encoded information is first ________ into an RNA intermediary by RNA polymerase.
Match the RNA polymerase with the genes they transcribe in eukaryotes:
Match the RNA polymerase with the genes they transcribe in eukaryotes:
Which of the following modifications marks RNA as an mRNA-to-be?
Which of the following modifications marks RNA as an mRNA-to-be?
All RNA molecules code for proteins.
All RNA molecules code for proteins.
What is the name of the complex that carries out RNA splicing?
What is the name of the complex that carries out RNA splicing?
Which of the following best describes the role of a poly-A tail in mRNA processing?
Which of the following best describes the role of a poly-A tail in mRNA processing?
Eukaryotes possess three distinct RNA ______, each responsible for synthesizing different types of RNA molecules.
Eukaryotes possess three distinct RNA ______, each responsible for synthesizing different types of RNA molecules.
According to the central dogma, information flows in which direction?
According to the central dogma, information flows in which direction?
Transcription is the process where RNA is translated into a protein sequence.
Transcription is the process where RNA is translated into a protein sequence.
What enzyme synthesizes RNA from a DNA template during transcription?
What enzyme synthesizes RNA from a DNA template during transcription?
In eukaryotes, transcription initiates at special DNA sequences called ________ .
In eukaryotes, transcription initiates at special DNA sequences called ________ .
Match the following RNA types with their primary function:
Match the following RNA types with their primary function:
What is the first modification that occurs to RNA immediately after the 5' end of RNA exits polymerase?
What is the first modification that occurs to RNA immediately after the 5' end of RNA exits polymerase?
Which of the following is NOT a type of RNA polymerase found in eukaryotes?
Which of the following is NOT a type of RNA polymerase found in eukaryotes?
MRNA molecules are exported from the nucleus to the cytosol, where they can be transcribed into proteins by ribosomes.
MRNA molecules are exported from the nucleus to the cytosol, where they can be transcribed into proteins by ribosomes.
If a mutation occurred in the gene encoding snoRNAs, which of the following processes would be most directly affected?
If a mutation occurred in the gene encoding snoRNAs, which of the following processes would be most directly affected?
Describe the role of the 'poly-A tail' added to eukaryotic mRNA molecules after transcription, and why it is important.
Describe the role of the 'poly-A tail' added to eukaryotic mRNA molecules after transcription, and why it is important.
Which of the following accurately describes the central dogma of molecular biology?
Which of the following accurately describes the central dogma of molecular biology?
In eukaryotes, transcription ends after RNA polymerase encounters a terminator sequence.
In eukaryotes, transcription ends after RNA polymerase encounters a terminator sequence.
What enzyme is responsible for transcribing DNA into an RNA intermediary?
What enzyme is responsible for transcribing DNA into an RNA intermediary?
MRNA molecules are exported from the nucleus to the ______, where they are translated into proteins by ribosomes.
MRNA molecules are exported from the nucleus to the ______, where they are translated into proteins by ribosomes.
What modification occurs to mRNA immediately after the 5' end of RNA exits polymerase?
What modification occurs to mRNA immediately after the 5' end of RNA exits polymerase?
The splicing process within pre-mRNA processing is considered non-flexible, resulting in only one possible splicing pattern for a given transcript.
The splicing process within pre-mRNA processing is considered non-flexible, resulting in only one possible splicing pattern for a given transcript.
What is the name given to the sequences within pre-mRNA that are removed during RNA splicing?
What is the name given to the sequences within pre-mRNA that are removed during RNA splicing?
Which of the following accounts for the largest percentage of cellular RNA?
Which of the following accounts for the largest percentage of cellular RNA?
Extension of the RNA chain during transcription requires ______, which use ATP hydrolysis to help RNA polymerase move along the chromatin.
Extension of the RNA chain during transcription requires ______, which use ATP hydrolysis to help RNA polymerase move along the chromatin.
What is the central dogma of molecular biology?
What is the central dogma of molecular biology?
In what cellular compartment does transcription occur?
In what cellular compartment does transcription occur?
What enzyme is responsible for synthesizing RNA during transcription?
What enzyme is responsible for synthesizing RNA during transcription?
What is the function of the 7-methylguanosine cap added to the 5' end of mRNA?
What is the function of the 7-methylguanosine cap added to the 5' end of mRNA?
What is the name given to the non-coding sequences present in pre-mRNA?
What is the name given to the non-coding sequences present in pre-mRNA?
What is the name of the complex that removes introns from pre-mRNA?
What is the name of the complex that removes introns from pre-mRNA?
What is the primary function of the poly-A tail added to the 3' end of eukaryotic mRNA?
What is the primary function of the poly-A tail added to the 3' end of eukaryotic mRNA?
Eukaryotes have three RNA polymerases; which one transcribes protein-coding genes?
Eukaryotes have three RNA polymerases; which one transcribes protein-coding genes?
Describe the role of snRNAs (small nuclear RNAs) in pre-mRNA processing. (Insanely difficult)
Describe the role of snRNAs (small nuclear RNAs) in pre-mRNA processing. (Insanely difficult)
Imagine a novel therapeutic approach that targets the fidelity of transcription. Given that both transcription and translation are ATP-dependent, but only transcription utilizes elongation factors, propose a strategy to selectively disrupt the fidelity of transcription without directly affecting translation. (Insanely difficult)
Imagine a novel therapeutic approach that targets the fidelity of transcription. Given that both transcription and translation are ATP-dependent, but only transcription utilizes elongation factors, propose a strategy to selectively disrupt the fidelity of transcription without directly affecting translation. (Insanely difficult)
According to the central dogma, what is the flow of information?
According to the central dogma, what is the flow of information?
What is the name of the process by which DNA-encoded information is copied into an RNA intermediary?
What is the name of the process by which DNA-encoded information is copied into an RNA intermediary?
After transcription, what must the RNA molecule undergo to become a mature messenger RNA (mRNA)?
After transcription, what must the RNA molecule undergo to become a mature messenger RNA (mRNA)?
Where do mRNA molecules go after being exported from the nucleus, and what happens to them there?
Where do mRNA molecules go after being exported from the nucleus, and what happens to them there?
Name one type of RNA molecule that does not code for proteins.
Name one type of RNA molecule that does not code for proteins.
What enzyme synthesizes RNA?
What enzyme synthesizes RNA?
In eukaryotes, what special DNA sequences indicate where transcription should begin?
In eukaryotes, what special DNA sequences indicate where transcription should begin?
Name the complex that carries out RNA splicing.
Name the complex that carries out RNA splicing.
Describe the initial modification that occurs on the 5' end of an RNA molecule immediately after it exits the polymerase.
Describe the initial modification that occurs on the 5' end of an RNA molecule immediately after it exits the polymerase.
Eukaryotic RNA polymerases I, II, and III are responsible for transcribing different sets of genes. Which RNA polymerase transcribes protein-coding genes, plus snoRNA, miRNA, siRNA, and most snRNA genes?
Eukaryotic RNA polymerases I, II, and III are responsible for transcribing different sets of genes. Which RNA polymerase transcribes protein-coding genes, plus snoRNA, miRNA, siRNA, and most snRNA genes?
Flashcards
Transcription
Transcription
The process where DNA-encoded information is copied into an RNA intermediary using RNA polymerase.
messenger RNA (mRNA)
messenger RNA (mRNA)
A mature RNA molecule that carries the genetic code to ribosomes for protein synthesis.
Translation
Translation
The process where mRNA is decoded by ribosomes to synthesize proteins.
Promoters
Promoters
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General Transcription Factors
General Transcription Factors
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Terminator Sequence
Terminator Sequence
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7-methylguanosine Cap
7-methylguanosine Cap
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Introns
Introns
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Exons
Exons
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Spliceosome
Spliceosome
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Central Dogma
Central Dogma
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Elongation factors
Elongation factors
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Polyadenylation signal
Polyadenylation signal
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Poly-A tail
Poly-A tail
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Poly-A binding proteins
Poly-A binding proteins
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Nuclear export receptor
Nuclear export receptor
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mRNA %
mRNA %
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Ribosomal RNA (rRNA)
Ribosomal RNA (rRNA)
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snRNAs
snRNAs
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RNA Polymerases
RNA Polymerases
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RNA Splicing
RNA Splicing
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Non-coding RNAs
Non-coding RNAs
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Transfer RNAs (tRNAs)
Transfer RNAs (tRNAs)
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Mature mRNA
Mature mRNA
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Genetic Information Use
Genetic Information Use
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Poly-A Polymerase
Poly-A Polymerase
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Location of RNA/Protein Synthesis
Location of RNA/Protein Synthesis
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Other RNAs
Other RNAs
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How rRNAs get their name
How rRNAs get their name
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Study Notes
- Genetic information in chromosomes must be read and converted into proteins to be useful, typically occurring in the cytosol
- DNA-encoded information is transcribed into an RNA intermediary via RNA polymerase
- After transcription, the RNA molecule undergoes several processing steps to become mature messenger RNA (mRNA)
- mRNA molecules are exported from the nucleus to the cytosol, where they can be translated into proteins by ribosomes
- Some RNA molecules do not code for proteins and are processed differently from mRNA molecules
- Transcription and translation are highly regulated, using many energy-dependent steps to ensure high fidelity
- Information flow proceeds from DNA to RNA to protein in all prokaryotes and eukaryotes
- Mechanisms are similar between prokaryotes and eukaryotes; several differences address specific difficulties in eukaryotes
- Information content from DNA > mRNA > protein
- RNA Transcription generates a single-stranded RNA molecule complementary to the DNA template strand
- RNA is synthesized 5'->3', and DNA is read 3'->5' by RNA polymerase, a complex multi-subunit enzyme
- Eukaryotes have three different RNA polymerases that synthesize different types of RNAs; prokaryotes have only one RNA polymerase
- Transcription initiates at promoters, special DNA sequences
- In prokaryotes, the RNA polymerase enzyme binds strongly to the promoter sequence
- In eukaryotes, transcription requires general transcription factors to position RNA polymerase and initiate the process
- Additional proteins are required to modify chromatin structure and fully activate transcription in eukaryotes
- Extension of the RNA chain requires elongation factors, which use ATP hydrolysis to help RNA polymerase move along chromatin
- RNA transcription stops when RNA polymerase encounters special DNA sequences. Either the terminator in prokaryotes, or polyadenylation signal in eukaryotes
- Most eukaryotic RNA requires functional post-transcriptional processing
mRNA Processing
- For RNAs that will encode proteins, processing becomes essential before they are considered mRNA
- The first modification occurs immediately after the 5' end of RNA exits polymerase
- Addition of a 7-methylguanosine "cap" to the 5' end of RNA marks it as an mRNA-to-be
Pre mRNA Processing
- Protein-coding genes contain intervening sequences called introns that interrupt the actual coding sequences, called exons
- Introns must be removed by RNA splicing via the spliceosome
- The spliceosome is made of small nuclear ribonucleoproteins (snRNPs) with small nuclear RNAs (snRNAs) and multiple proteins
- Splicing is directed by RNA sequences at intron-exon boundaries
- The spliceosome assembles on pre-mRNA while it is transcribed, but splicing can be delayed
- The splicing process is flexible, meaning a given transcript may have many possible splicing patterns
- Once transcription is complete, the RNA 3' end receives a poly-A tail
- The 3' end of the original RNA is cleaved, followed by a series of ~200 adenines added by a poly-A polymerase
- Poly-A binding proteins bind to the poly-A tail, which is important for export from the nucleus and later protein synthesis
mRNA Export
- RNA synthesis and processing occur in the nucleus, but protein synthesis occurs in the cytosol
- Only fully processed, mature mRNA is exported from the nucleus after removing some proteins like snRNPs and adding/retaining exon junction complexes at splice sites, cap-binding proteins, and poly-A binding proteins
- Mature mRNA binds to the nuclear export receptor, guiding it through the nuclear pore complex into the cytosol
- mRNA represents about 5% of cellular RNA
- Ribosomal RNA (rRNA) makes up to 80% of cellular RNA, forming the structural and catalytic core of ribosomes
- rRNA is synthesized by RNA pol I (18S, 5.8S, and 26S) and RNA pol III (5S)
- rRNA is heavily processed and assembled with ribosomal proteins in the nucleolus
- Other "non-coding" RNAs have functions in mRNA splicing (snRNAs), ribosome assembly (snoRNAs), protein synthesis (tRNAs), and regulation of gene expression (siRNAs and miRNAs), with telomere synthesis, etc
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