Transcription and Translation

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Questions and Answers

What is the final product of information flow, according to the central dogma?

  • Protein (correct)
  • DNA
  • mRNA
  • RNA

In prokaryotes, transcription requires the binding of general transcription factors to initiate the process.

False (B)

What type of RNA makes up the structural and catalytic core of ribosomes?

rRNA

DNA-encoded information is first ________ into an RNA intermediary by RNA polymerase.

<p>transcribed</p> Signup and view all the answers

Match the RNA polymerase with the genes they transcribe in eukaryotes:

<p>RNA polymerase I = 5.8S, 18S, and 28S rRNA genes RNA polymerase II = protein-coding genes, plus snoRNA genes, miRNA genes, siRNA genes, and most snRNA genes RNA polymerase III = tRNA genes, 5S rRNA genes, some snRNA genes and genes for other small RNAs</p> Signup and view all the answers

Which of the following modifications marks RNA as an mRNA-to-be?

<p>Addition of 7-methylguanosine 'cap' to the 5' end (B)</p> Signup and view all the answers

All RNA molecules code for proteins.

<p>False (B)</p> Signup and view all the answers

What is the name of the complex that carries out RNA splicing?

<p>spliceosome</p> Signup and view all the answers

Which of the following best describes the role of a poly-A tail in mRNA processing?

<p>It prevents degradation and aids in export from the nucleus (B)</p> Signup and view all the answers

Eukaryotes possess three distinct RNA ______, each responsible for synthesizing different types of RNA molecules.

<p>polymerases</p> Signup and view all the answers

According to the central dogma, information flows in which direction?

<p>DNA -&gt; RNA -&gt; Protein (C)</p> Signup and view all the answers

Transcription is the process where RNA is translated into a protein sequence.

<p>False (B)</p> Signup and view all the answers

What enzyme synthesizes RNA from a DNA template during transcription?

<p>RNA polymerase</p> Signup and view all the answers

In eukaryotes, transcription initiates at special DNA sequences called ________ .

<p>promoters</p> Signup and view all the answers

Match the following RNA types with their primary function:

<p>mRNA = Carries genetic information from DNA to ribosomes rRNA = Forms the structural and catalytic core of ribosomes tRNA = Acts as an adaptor between mRNA and amino acids during translation snRNA = Involved in pre-mRNA splicing</p> Signup and view all the answers

What is the first modification that occurs to RNA immediately after the 5' end of RNA exits polymerase?

<p>Addition of 7-methylguanosine cap (B)</p> Signup and view all the answers

Which of the following is NOT a type of RNA polymerase found in eukaryotes?

<p>RNA polymerase IV (C)</p> Signup and view all the answers

MRNA molecules are exported from the nucleus to the cytosol, where they can be transcribed into proteins by ribosomes.

<p>False (B)</p> Signup and view all the answers

If a mutation occurred in the gene encoding snoRNAs, which of the following processes would be most directly affected?

<p>rRNA processing (B)</p> Signup and view all the answers

Describe the role of the 'poly-A tail' added to eukaryotic mRNA molecules after transcription, and why it is important.

<p>The poly-A tail is a string of approximately 200 adenine bases added to the 3' end of the mRNA molecule. It is important for mRNA stability, export from the nucleus, and efficient translation.</p> Signup and view all the answers

Which of the following accurately describes the central dogma of molecular biology?

<p>DNA -&gt; RNA -&gt; Protein (D)</p> Signup and view all the answers

In eukaryotes, transcription ends after RNA polymerase encounters a terminator sequence.

<p>False (B)</p> Signup and view all the answers

What enzyme is responsible for transcribing DNA into an RNA intermediary?

<p>RNA polymerase</p> Signup and view all the answers

MRNA molecules are exported from the nucleus to the ______, where they are translated into proteins by ribosomes.

<p>cytosol</p> Signup and view all the answers

What modification occurs to mRNA immediately after the 5' end of RNA exits polymerase?

<p>Addition of 7-methylguanosine &quot;cap&quot; (C)</p> Signup and view all the answers

The splicing process within pre-mRNA processing is considered non-flexible, resulting in only one possible splicing pattern for a given transcript.

<p>False (B)</p> Signup and view all the answers

What is the name given to the sequences within pre-mRNA that are removed during RNA splicing?

<p>introns</p> Signup and view all the answers

Which of the following accounts for the largest percentage of cellular RNA?

<p>rRNA (A)</p> Signup and view all the answers

Extension of the RNA chain during transcription requires ______, which use ATP hydrolysis to help RNA polymerase move along the chromatin.

<p>elongation factors</p> Signup and view all the answers

What is the central dogma of molecular biology?

<p>DNA -&gt; RNA -&gt; Protein</p> Signup and view all the answers

In what cellular compartment does transcription occur?

<p>Nucleus</p> Signup and view all the answers

What enzyme is responsible for synthesizing RNA during transcription?

<p>RNA polymerase</p> Signup and view all the answers

What is the function of the 7-methylguanosine cap added to the 5' end of mRNA?

<p>Marks RNA as an mRNA-to-be</p> Signup and view all the answers

What is the name given to the non-coding sequences present in pre-mRNA?

<p>Introns</p> Signup and view all the answers

What is the name of the complex that removes introns from pre-mRNA?

<p>Spliceosome</p> Signup and view all the answers

What is the primary function of the poly-A tail added to the 3' end of eukaryotic mRNA?

<p>Export from the nucleus and later protein synthesis</p> Signup and view all the answers

Eukaryotes have three RNA polymerases; which one transcribes protein-coding genes?

<p>RNA polymerase II</p> Signup and view all the answers

Describe the role of snRNAs (small nuclear RNAs) in pre-mRNA processing. (Insanely difficult)

<p>snRNAs are components of the spliceosome, where they recognize splice sites and catalyze the splicing reaction to remove introns from pre-mRNA.</p> Signup and view all the answers

Imagine a novel therapeutic approach that targets the fidelity of transcription. Given that both transcription and translation are ATP-dependent, but only transcription utilizes elongation factors, propose a strategy to selectively disrupt the fidelity of transcription without directly affecting translation. (Insanely difficult)

<p>Develop an inhibitor specific to elongation factors. By targeting these factors, which are uniquely required for RNA polymerase progression along the chromatin during transcription but not directly involved in translation, it is possible to selectively compromise the fidelity of transcription. This could involve designing molecules that interfere with the ATP hydrolysis activity of elongation factors, thereby disrupting their ability to assist RNA polymerase in proofreading and error correction during transcription.</p> Signup and view all the answers

According to the central dogma, what is the flow of information?

<p>DNA to RNA to protein</p> Signup and view all the answers

What is the name of the process by which DNA-encoded information is copied into an RNA intermediary?

<p>Transcription</p> Signup and view all the answers

After transcription, what must the RNA molecule undergo to become a mature messenger RNA (mRNA)?

<p>Several processing steps</p> Signup and view all the answers

Where do mRNA molecules go after being exported from the nucleus, and what happens to them there?

<p>Cytosol; translated into proteins by ribosomes</p> Signup and view all the answers

Name one type of RNA molecule that does not code for proteins.

<p>tRNA, rRNA, snRNA, snoRNA, scaRNA, miRNA, siRNA</p> Signup and view all the answers

What enzyme synthesizes RNA?

<p>RNA polymerase</p> Signup and view all the answers

In eukaryotes, what special DNA sequences indicate where transcription should begin?

<p>Promoters</p> Signup and view all the answers

Name the complex that carries out RNA splicing.

<p>Spliceosome</p> Signup and view all the answers

Describe the initial modification that occurs on the 5' end of an RNA molecule immediately after it exits the polymerase.

<p>Addition of a 7-methylguanosine &quot;cap&quot;</p> Signup and view all the answers

Eukaryotic RNA polymerases I, II, and III are responsible for transcribing different sets of genes. Which RNA polymerase transcribes protein-coding genes, plus snoRNA, miRNA, siRNA, and most snRNA genes?

<p>RNA polymerase II</p> Signup and view all the answers

Flashcards

Transcription

The process where DNA-encoded information is copied into an RNA intermediary using RNA polymerase.

messenger RNA (mRNA)

A mature RNA molecule that carries the genetic code to ribosomes for protein synthesis.

Translation

The process where mRNA is decoded by ribosomes to synthesize proteins.

Promoters

Special DNA sequences where transcription is initiated.

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General Transcription Factors

Proteins that help position RNA polymerase and start the transcription process in eukaryotes.

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Terminator Sequence

Sequences that signal RNA polymerase to stop transcription in prokaryotes.

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7-methylguanosine Cap

A modification to the 5' end of RNA that marks it as an mRNA-to-be.

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Introns

Intervening sequences within a gene that are removed during RNA splicing.

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Exons

Expressed regions of the gene kept after splicing

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Spliceosome

A complex that removes introns from pre-mRNA during RNA splicing.

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Central Dogma

The flow of genetic information from DNA to RNA to protein.

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Elongation factors

Proteins that facilitate the movement of RNA polymerase along the chromatin during transcription.

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Polyadenylation signal

A sequence in eukaryotes signaling the end of transcription

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Poly-A tail

A string of approximately 200 adenine bases added to the 3' end of mRNA.

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Poly-A binding proteins

Proteins that bind to the poly-A tail.

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Nuclear export receptor

A receptor that transports mature mRNA out of the nucleus.

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mRNA %

Type of RNA representing only a small % of total cellular RNA

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Ribosomal RNA (rRNA)

Type of RNA making up most of cellular RNA, forming the ribosome's core.

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snRNAs

Small nuclear RNAs that help with splicing.

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RNA Polymerases

Enzymes that catalyze RNA synthesis; eukaryotes possess three distinct types.

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RNA Splicing

Process where introns are removed from pre-mRNA, and exons are joined to form mature mRNA.

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Non-coding RNAs

RNA molecules that are not translated into proteins but have other functions.

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Transfer RNAs (tRNAs)

RNAs that serve as adaptors between mRNA and amino acids during protein synthesis.

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Mature mRNA

Fully processed mRNA that is ready to be exported from the nucleus to the cytosol for protein synthesis.

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Genetic Information Use

Genetic information in chromosomes must be read and converted into proteins in the cytosol.

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Poly-A Polymerase

Adds a string of adenine bases to the 3' end of the RNA transcript.

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Location of RNA/Protein Synthesis

RNA synthesis and processing in the nucleus, protein synthesis in the cytosol.

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Other RNAs

rRNA, tRNA, snRNA, snoRNA, siRNA, miRNA

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How rRNAs get their name

rRNAs are named according to their “S” values, which refer to their rate of sedimentation in an ultracentrifuge. The larger the S value, the larger the rRNA.

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Study Notes

  • Genetic information in chromosomes must be read and converted into proteins to be useful, typically occurring in the cytosol
  • DNA-encoded information is transcribed into an RNA intermediary via RNA polymerase
  • After transcription, the RNA molecule undergoes several processing steps to become mature messenger RNA (mRNA)
  • mRNA molecules are exported from the nucleus to the cytosol, where they can be translated into proteins by ribosomes
  • Some RNA molecules do not code for proteins and are processed differently from mRNA molecules
  • Transcription and translation are highly regulated, using many energy-dependent steps to ensure high fidelity
  • Information flow proceeds from DNA to RNA to protein in all prokaryotes and eukaryotes
  • Mechanisms are similar between prokaryotes and eukaryotes; several differences address specific difficulties in eukaryotes
  • Information content from DNA > mRNA > protein
  • RNA Transcription generates a single-stranded RNA molecule complementary to the DNA template strand
  • RNA is synthesized 5'->3', and DNA is read 3'->5' by RNA polymerase, a complex multi-subunit enzyme
  • Eukaryotes have three different RNA polymerases that synthesize different types of RNAs; prokaryotes have only one RNA polymerase
  • Transcription initiates at promoters, special DNA sequences
    • In prokaryotes, the RNA polymerase enzyme binds strongly to the promoter sequence
    • In eukaryotes, transcription requires general transcription factors to position RNA polymerase and initiate the process
  • Additional proteins are required to modify chromatin structure and fully activate transcription in eukaryotes
  • Extension of the RNA chain requires elongation factors, which use ATP hydrolysis to help RNA polymerase move along chromatin
  • RNA transcription stops when RNA polymerase encounters special DNA sequences. Either the terminator in prokaryotes, or polyadenylation signal in eukaryotes
  • Most eukaryotic RNA requires functional post-transcriptional processing

mRNA Processing

  • For RNAs that will encode proteins, processing becomes essential before they are considered mRNA
  • The first modification occurs immediately after the 5' end of RNA exits polymerase
  • Addition of a 7-methylguanosine "cap" to the 5' end of RNA marks it as an mRNA-to-be

Pre mRNA Processing

  • Protein-coding genes contain intervening sequences called introns that interrupt the actual coding sequences, called exons
  • Introns must be removed by RNA splicing via the spliceosome
    • The spliceosome is made of small nuclear ribonucleoproteins (snRNPs) with small nuclear RNAs (snRNAs) and multiple proteins
    • Splicing is directed by RNA sequences at intron-exon boundaries
  • The spliceosome assembles on pre-mRNA while it is transcribed, but splicing can be delayed
  • The splicing process is flexible, meaning a given transcript may have many possible splicing patterns
  • Once transcription is complete, the RNA 3' end receives a poly-A tail
  • The 3' end of the original RNA is cleaved, followed by a series of ~200 adenines added by a poly-A polymerase
  • Poly-A binding proteins bind to the poly-A tail, which is important for export from the nucleus and later protein synthesis

mRNA Export

  • RNA synthesis and processing occur in the nucleus, but protein synthesis occurs in the cytosol
  • Only fully processed, mature mRNA is exported from the nucleus after removing some proteins like snRNPs and adding/retaining exon junction complexes at splice sites, cap-binding proteins, and poly-A binding proteins
  • Mature mRNA binds to the nuclear export receptor, guiding it through the nuclear pore complex into the cytosol
  • mRNA represents about 5% of cellular RNA
  • Ribosomal RNA (rRNA) makes up to 80% of cellular RNA, forming the structural and catalytic core of ribosomes
  • rRNA is synthesized by RNA pol I (18S, 5.8S, and 26S) and RNA pol III (5S)
  • rRNA is heavily processed and assembled with ribosomal proteins in the nucleolus
  • Other "non-coding" RNAs have functions in mRNA splicing (snRNAs), ribosome assembly (snoRNAs), protein synthesis (tRNAs), and regulation of gene expression (siRNAs and miRNAs), with telomere synthesis, etc

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