Recombinant DNA Technology
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Recombinant DNA Technology

Learn about the direct manipulation of DNA and the deliberate modification of an organism's genetic information through recombinant DNA technology. Discover its history and key breakthroughs.

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@ReputableTuring

Questions and Answers

By the late 1970s, techniques for easily sequencing ______, synthesizing oligonucleotides, and expressing eukaryotic genes in prokaryotes had also been developed.

DNA

Between 1983 and 1985, Kary Mullis developed a new technique to synthesize large quantities of a DNA fragment without ______ it.

cloning

This is the polymerase chain reaction or ______ technique.

PCR

The first step in the PCR technique is to ______ the DNA at 94°C for 15 seconds.

<p>Denature</p> Signup and view all the answers

The third step in the PCR technique is ______ at 68°C for 60 seconds.

<p>Extension</p> Signup and view all the answers

The easiest vectors to work with are ______.

<p>plasmids</p> Signup and view all the answers

RDNA phages and other viruses are more conveniently stored for long ______.

<p>periods</p> Signup and view all the answers

Larger pieces of DNA can be cloned with cosmids and artificial ______.

<p>chromosomes</p> Signup and view all the answers

______ is synthesized for the treatment of diabetes.

<p>Insulin</p> Signup and view all the answers

Erythropoeitin is used in the treatment of ______.

<p>anemia</p> Signup and view all the answers

Diagnosis of ______ disease can be done using genetic engineering.

<p>infectious</p> Signup and view all the answers

Howard Temin and David Baltimore discovered the enzyme called ______.

<p>reverse transcriptase</p> Signup and view all the answers

The restriction enzyme ______, isolated from E. coli, cleaves the DNA between G and A in the base sequence GAATTC.

<p>EcoRI</p> Signup and view all the answers

The EcoRI enzyme cleaves DNA leaving two ______ ends.

<p>sticky</p> Signup and view all the answers

Reverse transcriptase can be used to construct a DNA copy called ______.

<p>complementary DNA</p> Signup and view all the answers

The restriction enzyme EcoRI cleaves the DNA between G and ______ in the base sequence GAATTC.

<p>A</p> Signup and view all the answers

The mRNA strand ends with a ______ tail.

<p>Poly-A</p> Signup and view all the answers

Once fragments have been isolated, they are ligated with an appropriate ______, such as a plasmid.

<p>vector</p> Signup and view all the answers

The first step is to cut the plasmid with the restriction enzyme ______.

<p>EcoRI</p> Signup and view all the answers

The plasmid and donor DNA are joined together by the enzyme ______, forming a recombinant DNA molecule.

<p>ligase</p> Signup and view all the answers

The ______ DNA is also cut with the restriction enzyme EcoRI, creating complementary sticky ends.

<p>donor</p> Signup and view all the answers

The recombinant DNA molecule is introduced into a ______ cell, which is then grown in a medium containing tetracycline.

<p>bacterial</p> Signup and view all the answers

One of the easiest approaches is to cut the plasmid and donor DNA with the same ______ enzyme.

<p>restriction</p> Signup and view all the answers

Cells that have integrated the recombinant DNA molecule will be resistant to ______ and will form colonies on the petri dish.

<p>tetracycline</p> Signup and view all the answers

This molecule can be transformed into a bacterial cell, where it can be transcribed and ______.

<p>translated</p> Signup and view all the answers

The next milestone was the successful generation of recombinant DNA ______.

<p>molecules</p> Signup and view all the answers

They allowed the sticky ends of fragments to anneal then covalently joined the fragments with the enzyme DNA ______.

<p>ligase</p> Signup and view all the answers

Within a year, plasmid ______, or carriers of foreign DNA fragments during gene cloning, had been developed and combined with foreign DNA.

<p>vectors</p> Signup and view all the answers

DNA cut by a restriction ______.

<p>enzyme</p> Signup and view all the answers

Discovery of Southern blotting technique for detecting specific DNA fragments so that a particular gene could be ______ from a complex DNA mixture.

<p>isolated</p> Signup and view all the answers

The Southern blotting technique depends on the specificity of base ______ in nucleic acids.

<p>complementarity</p> Signup and view all the answers

They normally protect the host cell by destroying phage DNA after its ______.

<p>entrance</p> Signup and view all the answers

Cells protect their own DNA from restriction enzymes by ______ nucleotides in the sites that these enzymes recognize.

<p>methylating</p> Signup and view all the answers

Incoming foreign DNA is not methylated at the same sites and often is ______ by host restriction enzymes.

<p>cleaved</p> Signup and view all the answers

There are ______ general types of restriction enzymes.

<p>three</p> Signup and view all the answers

Types I and III cleave DNA away from ______ sites.

<p>recognition</p> Signup and view all the answers

Type II restriction endonucleases cleave DNA at specific ______ sites.

<p>recognition</p> Signup and view all the answers

The type II enzymes can be used to prepare DNA fragments containing specific ______ or portions of genes.

<p>genes</p> Signup and view all the answers

EcoRI is a restriction enzyme derived from ______ coli that recognizes the sequence 5’-G-A-A-T-T-C-3’.

<p>Escherichia</p> Signup and view all the answers

One can extract all the DNA from an organism, cleave the DNA into ______, isolate the fragment of interest for cloning.

<p>fragments</p> Signup and view all the answers

All of the fragments can be cloned by means of a suitable ______, and each clone tested for the desired gene.

<p>vector</p> Signup and view all the answers

A DNA fragment can directly be ______.

<p>synthesized</p> Signup and view all the answers

Agarose or polyacrylamide gels are used to separate DNA ______.

<p>fragments</p> Signup and view all the answers

The deliberate modification of an organism's genetic information by directly changing its nucleic acid genome is called ______.

<p>genetic engineering</p> Signup and view all the answers

DNA molecules are placed in an electrical ______ and allowed to migrate toward the positive and negative poles.

<p>field</p> Signup and view all the answers

By inserting recombinant DNA molecules into an organism, these molecules can be ______.

<p>propagated</p> Signup and view all the answers

The molecules separate because they move at different rates due to their differences in ______ and size.

<p>charge</p> Signup and view all the answers

Recombinant DNA technology opens up totally new areas of ______ and applied biology.

<p>research</p> Signup and view all the answers

Negatively charged DNA fragments move toward the positive electrode or ______.

<p>anode</p> Signup and view all the answers

One of the first breakthroughs leading to recombinant DNA technology was the discovery of microbial enzymes called ______.

<p>restriction enzymes</p> Signup and view all the answers

Each fragment’s migration rate is inversely proportional to the log of its ______ weight.

<p>molecular</p> Signup and view all the answers

These enzymes recognize and cleave specific sequences about ______ base pairs long.

<p>4 to 8</p> Signup and view all the answers

Recombinant DNA is DNA with a new sequence formed by joining fragments from two or more different ______.

<p>sources</p> Signup and view all the answers

Study Notes

Recombinant DNA Technology

  • Recombinant DNA technology allows for the direct manipulation of DNA, enabling the deliberate modification of an organism's genetic information.
  • This technology is accomplished by a collection of methods known as recombinant DNA technology.

Historical Perspectives

  • The discovery of restriction enzymes in the late 1960s by Werner Arber and Hamilton Smith was a crucial breakthrough leading to recombinant DNA technology.
  • These enzymes recognize and cleave specific sequences about 4 to 8 base pairs long and are known as restriction enzymes or restriction endonucleases.
  • There are three general types of restriction enzymes:
    • Type I and III cleave DNA away from recognition sites.
    • Type II restrictions endonucleases cleave DNA at specific recognition sites.
  • Type II enzymes can be used to prepare DNA fragments containing specific genes or portions of genes.

Polymerase Chain Reaction (PCR)

  • Kary Mullis developed the PCR technique between 1983 and 1985.
  • PCR is a technique to synthesize large quantities of a DNA fragment without cloning it.
  • The steps involved in PCR are:
    • Denaturation at 94°C for 15 seconds.
    • Annealing.
    • Extension at 68°C for 60 seconds.

Cloning Vectors

  • There are four major types of vectors:
    • Plasmids.
    • Bacteriophages and other viruses.
    • Cosmids.
    • Artificial chromosomes.
  • Plasmids are the easiest to work with.
  • rDNA phages and other viruses are more conveniently stored for long periods.
  • Larger pieces of DNA can be cloned with cosmids and artificial chromosomes.

Medical Applications

  • Recombinant DNA technology has various medical applications, including:
    • Synthesis of medically important molecules, such as:
      • α₁-antitrypsin for treatment of emphysema.
      • Interferons for antiviral, antitumor, and anti-inflammatory agents.
      • Blood-clotting factor VIII for treatment of hemophilia.
    • Diagnosis of infectious diseases.

Isolating and Cloning Fragments

  • Once fragments have been isolated, they are ligated with an appropriate vector to form a recombinant molecule.
  • This can then be introduced into the host.
  • One of the easiest and most popular approaches is to cut the plasmid and donor DNA with the same restriction enzyme so that identical sticky ends are formed.
  • The steps involved in isolating and cloning fragments are:
    • Cutting the plasmid with a restriction enzyme, such as EcoRI.
    • Cutting the donor DNA with the same restriction enzyme.
    • Ligation of the sticky ends.
    • Transformation of the recombinant DNA molecule into a bacterial cell.
    • Selection of bacteria that have integrated the recombinant DNA molecule into their genome.

Electrophoresis

  • Agarose or polyacrylamide gels are used to separate DNA fragments.
  • DNA molecules are placed in an electrical field and allowed to migrate toward the positive and negative poles.
  • The molecules separate because they move at different rates due to their differences in charge and size.

Preparation of Recombinant DNA

  • There are three ways to obtain adequate quantities of a DNA fragment:
    • Extracting all the DNA from an organism, cleaving it into fragments, and isolating the fragment of interest for cloning.
    • Cloning all the fragments and testing each clone for the desired gene.
    • Directly synthesizing a DNA fragment.

Restriction Enzyme

  • The restriction enzyme EcoRI, isolated from E. coli, cleaves the DNA between G and A in the base sequence GAATTC.
  • Leaving two sticky ends or cohesive ends.

Making cDNA

  • The enzyme reverse transcriptase can be used to construct a DNA copy, called complementary DNA (cDNA), of any RNA.
  • The process of making cDNA involves:
    • Reverse transcription of mRNA to form a cDNA with a hairpin loop.
    • Removing the RNA using RNase H or alkali.
    • Synthesizing the second strand using DNA polymerase I and free nucleotides.
    • Removing the hairpin loop using S1 nuclease.

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