Protein Synthesis Quiz
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Questions and Answers

What is the name given to the functional units within a protein?

  • Subunits
  • Conformations
  • Motifs
  • Domains (correct)
  • Which structural level of a protein is determined by the interactions between neighboring amino acids?

  • Secondary (correct)
  • Primary
  • Tertiary
  • Quaternary
  • What is the name given to the sequence of three nucleotides that codes for a specific amino acid?

  • Exon
  • Codon (correct)
  • Gene
  • Intron
  • What is the main difference between a sense codon and a stop codon?

    <p>Sense codons code for amino acids, while stop codons signal the end of translation. (B)</p> Signup and view all the answers

    What is the significance of the genetic code being 'degenerate'?

    <p>It means that multiple codons can code for the same amino acid, providing some flexibility. (D)</p> Signup and view all the answers

    During termination of protein synthesis, what specifically recognizes the stop codon?

    <p>eRF1 (D)</p> Signup and view all the answers

    What is the role of eRF3 in the termination of protein synthesis?

    <p>It helps in the release of the newly synthesized polypeptide from the ribosome. (A)</p> Signup and view all the answers

    What is the role of the 28S rRNA in protein synthesis?

    <p>It mediates the formation of the peptide bond between amino acids. (B)</p> Signup and view all the answers

    During translation, what happens to the tRNA after it has delivered its amino acid?

    <p>It is released from the ribosome and recycled back to the cytoplasm. (B)</p> Signup and view all the answers

    What is the role of helicase activity in protein synthesis?

    <p>It unwinds any secondary structures formed in the mRNA. (C)</p> Signup and view all the answers

    What is the function of tRNA?

    <p>To transport amino acids to the ribosome during translation (C)</p> Signup and view all the answers

    What is the significance of the "S" unit in terms of ribosomes?

    <p>It indicates the sedimentation coefficient of the ribosome (D)</p> Signup and view all the answers

    Which of the following is NOT a key characteristic of the genetic code?

    <p>Ambiguity (D)</p> Signup and view all the answers

    Where does translation of mRNA into proteins occur?

    <p>Cytoplasm (B)</p> Signup and view all the answers

    How many termination codons are there in the genetic code?

    <p>3 (C)</p> Signup and view all the answers

    What is the function of the initiation codon AUG?

    <p>All of the above (D)</p> Signup and view all the answers

    Which of the following is NOT a characteristic of rRNA?

    <p>It is the most abundant type of RNA in a cell (A)</p> Signup and view all the answers

    What is meant by the "universality" of the genetic code?

    <p>The code is the same for all organisms (C)</p> Signup and view all the answers

    What is the function of the Kozak sequence?

    <p>It signals the start of translation and provides a binding site for the initiator tRNA. (C)</p> Signup and view all the answers

    What is the role of the CBC (cap-binding complex) in translation?

    <p>It promotes the export of the mRNA from the nucleus to the cytoplasm and initiates the pioneer round of translation. (C)</p> Signup and view all the answers

    Which of the following is NOT a requirement for the elongation phase of translation?

    <p>Initiation factors (D)</p> Signup and view all the answers

    Where does the initiator tRNA bind in the ribosome?

    <p>P site (B)</p> Signup and view all the answers

    How is the specificity of tRNA charging ensured?

    <p>By the aminoacyl-tRNA synthetases. (A)</p> Signup and view all the answers

    What is the role of GTP in translation?

    <p>It provides energy for the movement of the ribosome along the mRNA. (C)</p> Signup and view all the answers

    Which of the following is a difference in the initiation of translation between eukaryotic and prokaryotic cells?

    <p>The presence of a 5' cap on the mRNA. (E)</p> Signup and view all the answers

    What is the function of the aminoacyl-tRNA synthetases?

    <p>To attach the correct amino acid to its corresponding tRNA. (C)</p> Signup and view all the answers

    Which of the following is NOT true about tRNA charging?

    <p>The carboxyl group of the amino acid is attached to the first nitrogenous base at the 5' end of tRNA. (C)</p> Signup and view all the answers

    What is the purpose of the pioneer round of translation?

    <p>To produce a small amount of protein to check for errors. (B)</p> Signup and view all the answers

    What is the name of the process that converts the information contained in a molecule of messenger RNA (mRNA) into a protein?

    <p>Translation (D)</p> Signup and view all the answers

    Which of the following is NOT a function of proteins?

    <p>Photosynthesis (C)</p> Signup and view all the answers

    What type of RNA molecule carries the genetic code from the DNA to the ribosomes?

    <p>mRNA (B)</p> Signup and view all the answers

    Which of the following is a key step in translation?

    <p>The formation of a peptide bond between amino acids (D)</p> Signup and view all the answers

    Flashcards

    Translation

    The process by which proteins are synthesized from mRNA information.

    Messenger RNA (mRNA)

    A type of RNA that carries instructions from DNA for protein synthesis.

    Proteins

    Molecules that perform various functions such as enzymatic, structural, regulatory, and transport.

    tRNA

    Transfer RNA that brings amino acids to the ribosome for protein synthesis.

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    rRNA

    Ribosomal RNA that forms the core of ribosome's structure and catalyzes protein synthesis.

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    Functions of Proteins

    Proteins serve various functions: enzymatic, structural, regulatory, and transport.

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    Amino Acids

    Amino acids are the monomers that link together to form proteins.

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    Peptide Bonds

    Peptide bonds are the links that join amino acids together in polypeptide chains.

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    Codon

    A codon is a sequence of three nucleotides that encodes an amino acid in protein synthesis.

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    Genetic Code Structure

    The genetic code is degenerate and not ambiguous, meaning multiple codons can code for one amino acid, but each codon codes for one only.

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    Initiation Codon

    AUG, the codon that starts protein synthesis.

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    Termination Codons

    UAA, UAG, UGA; signals to stop protein synthesis.

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    Universal Genetic Code

    The genetic code shared across all living organisms.

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    Transfer RNA (tRNA)

    Links genetic code to amino acids; transports them to ribosomes.

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    Ribosomal RNA (rRNA)

    RNA in ribosomes; key role in protein synthesis.

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    Ribosome

    Complex made of rRNA and proteins; site of translation.

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    mRNA Transport

    Movement of mRNA from the nucleus to the cytoplasm after transcription.

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    tRNA Nomenclature

    Naming each tRNA based on the amino acid it carries (e.g., tRNAPro for proline).

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    Ribosome Binding

    Ribosomes bind near the 5’ end of mRNAs to initiate translation.

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    Translation Stages

    The stages of translation include tRNA charging, initiation, elongation, and termination.

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    tRNA Charging

    tRNA charging is the process of binding tRNAs to their corresponding amino acids.

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    Initiation Factors

    Initiation factors are proteins necessary for the assembly of the translation machinery.

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    Initiation of Translation

    The initiation of translation involves mRNA binding to the ribosome and starting at the AUG codon.

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    Elongation

    Elongation is the stage where amino acids are added to the growing polypeptide chain.

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    Aminoacyl-tRNA Synthetases

    Aminoacyl-tRNA synthetases attach the correct amino acid to its tRNA.

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    Codon-Anticodon Interaction

    The specific pairing between a codon on mRNA and its complementary anticodon on tRNA.

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    Stop Codon

    A stop codon signals the end of protein synthesis, terminating translation.

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    Kozak Sequence

    A sequence surrounding the start codon (AUG) that aids in its recognition.

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    eEFs Role

    eEFs mediate GDP-GTP conversion essential for translation.

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    Peptide Bond Formation

    A peptide bond is formed between amino acids in A and P sites, releasing amino acid from tRNA.

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    Termination of Protein Synthesis

    Termination occurs when a stop codon is reached, with no tRNA available for it.

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    Release Factors (RFs)

    RFs, including eRF1 and eRF3, mediate the release of tRNA and mRNA and ribosome dissociation.

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    Study Notes

    Intended Learning Outcomes

    • Discuss the structure and functions of proteins
    • Explain the genetic code
    • Describe the structure and function of tRNA and rRNA
    • Outline the main steps of translation

    From Nucleic Acid to Protein

    • Translation is the process of synthesizing a protein from the information in a messenger RNA (mRNA) molecule.
    • The process involves transcription and translation

    Proteins: Functions

    • Proteins have various functions, including enzymatic, regulatory, and transport functions.
    • Enzymes, like lactase, catalyze reactions.
    • Regulatory proteins control gene expression.
    • Transport proteins, like active transporter proteins, move molecules across membranes.

    Amino Acids

    • Amino acids (aa) are the monomers of proteins.
    • They have an amine group, a carboxyl group, and a variable group.
    • Amino acids are categorized based on their side chain properties (e.g., electrically charged, polar uncharged, special cases, hydrophobic).
    • Essential and non-essential amino acids exist.

    Polypeptide Chains

    • Polypeptide chains are formed from amino acids via peptide bonds.
    • The sequence of amino acids forms the primary structure.
    • Interactions between amino acids lead to secondary structures (e.g., pleated sheets, alpha helices).
    • These secondary structures interact with each other to create a three-dimensional tertiary structure.
    • Multiple polypeptide chains can assemble to form a quaternary structure.

    From Nucleotides to Amino Acids

    • The genetic code unit is a codon, composed of three nucleotides.
    • The flow of genetic information from gene to protein is a triplet code.
    • The codons are three-nucleotide sequences that specify the amino acids.
    • There are 64 possible codons, 3 of which are stop codons, and 61 sense codons

    Breaking the Genetic Code

    • Codons are triplet RNA codes.
    • There are 64 possible codons; 3 are stop codons.
    • 61 sense codons exist.
    • The genetic code is degenerate (more than one codon may specify an amino acid), but not ambiguous (one codon doesn't specify more than one amino acid).
    • Codons must be read in the correct reading frame.

    Transfer RNA (tRNA)

    • tRNA is the link between the genetic code and amino acids.
    • tRNA transports a specific amino acid to the ribosome.
    • Each tRNA can bind only one amino acid.
    • Structure of tRNA: acceptor stem, D-arm, T-arm, anticodon.

    Ribosomal RNA (rRNA)

    • Ribosomes are complexes of rRNA and proteins.
    • Ribosomes are the site of protein synthesis.
    • Ribosomes are abundant.
    • Eukaryotic ribosomes are different from prokaryotic ribosomes in terms of size and rRNA components.
    • rRNA and protein synthesis occurs with multiple copies in eukaryotes, clustered and processed in the post-transcription stage.

    tRNA Charging

    • tRNA charging involves attaching an amino acid to a tRNA molecule, catalyzed by aminoacyl-tRNA synthetases.
    • The CCA sequence is shared by all tRNAs.
    • The carboxyl group of the amino acid attaches to the A base at the tRNA’s 3’ end.
    • Specific aminoacyl-tRNA synthetases recognize specific amino acids and their corresponding tRNA molecules.

    Initiation of Translation

    • Initiation involves the assembly of ribosomal subunits, mRNA, initiator tRNA, and initiation factors.
    • mRNA binds to the small ribosomal subunit.
    • Initiator tRNA (carrying methionine) binds to the mRNA codon.
    • The large ribosomal subunit joins the complex.
    • The 40S and 60S ribosomal subunits join to form the 80S ribosome.

    Elongation

    • Elongation involves adding amino acids to the growing polypeptide chain.
    • A tRNA carrying the next amino acid binds to the A site on the ribosome.
    • A peptide bond forms between the amino acids.
    • The ribosome moves along the mRNA.
    • The tRNA in the P site moves to the E site, and the tRNA in the A site moves to the P site.

    Termination

    • Termination occurs when a stop codon is reached on the mRNA.
    • Release factors bind to the stop codon.
    • The polypeptide chain is released.
    • The ribosome disassembles.

    Protein Synthesis and Disease

    • Some diseases result from defects in protein synthesis.
    • Diphtheria and tetanus toxins can interfere with protein synthesis.

    Exceptions to Central Dogma

    • Prion diseases demonstrate exceptions to the central dogma of molecular biology—protein-based inheritance rather than gene-based inheritance.

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    Description

    Test your knowledge on the intricacies of protein synthesis, including the roles of codons, tRNA, and ribosomes. This quiz covers essential concepts of molecular biology relevant to understanding how proteins are synthesized from mRNA. Perfect for students studying genetics or biochemistry.

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