Biochem 12.3 Oxidative Phosphorylation Overview

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Questions and Answers

What effect do uncouplers like 2,4-DNP and FCCP have on ATP production in mitochondria?

  • They increase ATP production by enhancing proton flow through ATP synthase.
  • They generate ATP at an increased rate despite the presence of protons.
  • They allow protons to return to the matrix without generating ATP. (correct)
  • They completely inhibit the electron transport chain.

How do uncouplers affect oxygen consumption during cellular respiration?

  • Oxygen consumption continues or may increase despite reduced ATP synthesis. (correct)
  • Oxygen consumption decreases due to diminished electron transport chain activity.
  • Oxygen consumption remains constant regardless of proton flow.
  • Oxygen consumption stops completely when uncouplers are introduced.

What is the role of thermogenin (UCP1) in brown adipose tissue under cold conditions?

  • It prevents protons from entering the mitochondria.
  • It enhances ATP synthesis by increasing proton flow through ATP synthase.
  • It stimulates the electron transport chain to produce excess ATP.
  • It allows protons to flow into the matrix, generating heat instead of ATP. (correct)

What is the consequence of a smaller pH gradient in the presence of uncouplers?

<p>Protons have a reduced ability to flow through ATP synthase. (D)</p> Signup and view all the answers

What is one main reason that warm-blooded organisms might induce uncoupling during respiration?

<p>To convert energy into heat to maintain body temperature in cold environments. (D)</p> Signup and view all the answers

What is the primary function of the electron transport chain in oxidative phosphorylation?

<p>To create a proton concentration gradient across the mitochondrial membrane (D)</p> Signup and view all the answers

What does the proton motive force primarily depend on?

<p>The concentration gradient of protons (A)</p> Signup and view all the answers

Which complex is responsible for coupling the flow of protons with ATP synthesis?

<p>ATP synthase (A)</p> Signup and view all the answers

What is the approximate pH of the intermembrane space in a typical healthy mammalian cell?

<p>7.4 (B)</p> Signup and view all the answers

Which statement about protons and the mitochondrial membrane is true?

<p>Protons require a channel or carrier protein to cross the membrane (B)</p> Signup and view all the answers

How is ATP synthesis powered in oxidative phosphorylation?

<p>By the oxidation of NADH and FADH2 (D)</p> Signup and view all the answers

Why is the term 'proton motive force' considered a misnomer?

<p>Because it does not imply a direct force acting on protons (B)</p> Signup and view all the answers

What is the primary role of ATP synthase in oxidative phosphorylation?

<p>To convert ADP and Pi into ATP (D)</p> Signup and view all the answers

What conformation of the aß complex binds ADP and inorganic phosphate?

<p>Dimer 1 (C)</p> Signup and view all the answers

How many protons are required for one complete rotation of the y unit in ATP synthase?

<p>3 protons (C)</p> Signup and view all the answers

What event occurs when Dimer 2 of the aß complex changes conformation?

<p>It releases ATP. (B)</p> Signup and view all the answers

What process describes the transport of ATP out of the mitochondrial matrix?

<p>Antiport system (B)</p> Signup and view all the answers

What additional proton is necessary for synthesizing cytosolic ATP?

<p>A proton moving through the phosphate transporter (C)</p> Signup and view all the answers

Which of the following statements about ATP synthase is true?

<p>It relies on the proton gradient created by the electron transport chain. (D)</p> Signup and view all the answers

What is the consequence of the uncoupling of ATP synthase from the electron transport chain?

<p>Decreased proton gradient (A)</p> Signup and view all the answers

How many protons must move into the matrix for one ATP molecule to be synthesized in total?

<p>4 protons (A)</p> Signup and view all the answers

What role does ATP synthase play in cellular respiration?

<p>It synthesizes ATP by coupling proton transport to their electrochemical gradient. (C)</p> Signup and view all the answers

Which components make up the ATP synthase enzyme?

<p>F<sub>o</sub> and F<sub>1</sub> domains (C)</p> Signup and view all the answers

What happens to the c subunits of the Fo domain during ATP synthesis?

<p>They undergo rotation upon binding protons. (C)</p> Signup and view all the answers

How is the rotation of the y subunit related to ATP synthesis?

<p>It induces conformational changes in the αβ complexes. (D)</p> Signup and view all the answers

What type of transport does ATP synthase primarily facilitate?

<p>Passive transport of protons into the matrix. (C)</p> Signup and view all the answers

What distinguishes ATP synthase from other translocases like the Na+/K+ pump?

<p>ATP synthase synthesizes ATP while others do not. (C)</p> Signup and view all the answers

What is the function of the b subunits in the Fo domain?

<p>They act as a homodimeric arm interacting with the F<sub>1</sub> domain. (A)</p> Signup and view all the answers

Which statement about the αβ complexes in the F1 domain is correct?

<p>They surround the y subunit and change conformations independently. (C)</p> Signup and view all the answers

Flashcards

Proton Motive Force (pmf)

The energy stored in the proton gradient across the inner mitochondrial membrane, caused by a difference in both proton concentration and charge.

Oxidative Phosphorylation

The process by which ATP is synthesized using the energy released from the flow of protons down their concentration gradient across the inner mitochondrial membrane.

Proton Gradient

The difference in proton (H+) concentration across the inner mitochondrial membrane, with the intermembrane space having a higher concentration than the mitochondrial matrix.

Voltage Gradient

The difference in electrical charge across the inner mitochondrial membrane, with the intermembrane space being more positively charged than the mitochondrial matrix.

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ATP Synthase

The enzyme responsible for synthesizing ATP using the energy released from the proton motive force.

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ATP Synthesis

The process of combining ADP with inorganic phosphate (Pi) to create ATP.

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Active Transport

The transport of molecules across a membrane that requires energy, such as the movement of protons against their concentration gradient.

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Passive Transport

The transport of molecules across a membrane that does not require energy, such as the movement of protons down their concentration gradient.

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What is the function of ATP synthase?

ATP synthase catalyzes ATP synthesis by utilizing the proton gradient across the inner mitochondrial membrane.

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How does ATP synthase work?

ATP synthase couples the movement of protons down their electrochemical gradient with the synthesis of ATP.

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What is ATP synthase?

ATP synthase is a transmembrane protein that facilitates the movement of protons across the inner mitochondrial membrane.

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What are the main parts of ATP synthase?

ATP synthase is a complex enzyme with two major domains, the Fo domain and the F1 domain.

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What is the function of the Fo domain?

The Fo domain is a transmembrane complex that allows protons to flow through it. This domain contains subunits called the 'c subunits' that bind protons. As protons bind, the c subunits rotate, driving the F1 domain to synthesize ATP.

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What is the function of the F1 domain?

The F1 domain contains three sets of heterodimers, each consisting of an α subunit and a β subunit. These dimers surround the γ subunit, which is connected to the c subunits of Fo. As the c subunits rotate, the γ subunit rotates, causing conformational changes in the αβ complexes, which ultimately leads to ATP synthesis.

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How do the Fo and F1 domains work together in ATP synthase?

The Fo domain acts as a channel for protons to flow from the intermembrane space into the mitochondrial matrix, while the F1 domain is responsible for ATP synthesis. The rotation of the c subunits within the Fo domain drives the rotation of the γ subunit within the F1 domain, which in turn leads to conformational changes in the αβ dimers, resulting in ATP synthesis.

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Why is ATP synthase important for energy production?

ATP synthase is a unique enzyme that couples the movement of protons down their electrochemical gradient with the synthesis of ATP. This process is known as chemiosmosis, and it is essential for energy production in cells.

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ATP Synthase Rotation

The rotation of the y subunit in ATP synthase, driven by the proton gradient, causes conformational changes in aß complexes which facilitate ATP synthesis.

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ATP Yield per Turn

Three protons are required to drive one turn of the y subunit in ATP synthase, resulting in the production of three ATP molecules.

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ATP Transport

The transport of ATP from the mitochondrial matrix to the cytosol. ATP exits the matrix while ADP enters, facilitated by a transporter.

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Phosphate Transport

The movement of inorganic phosphate into the mitochondrial matrix, coupled with proton movement from the intermembrane space, ensures phosphate availability for ATP synthesis.

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Coupled ATP Synthesis

The process where ATP synthesis is directly linked to the proton gradient generated by the electron transport chain.

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Uncoupled ATP Synthesis

The disruption of the coupling between the electron transport chain and ATP synthase. This results in the energy stored in the proton gradient being dissipated without ATP production.

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Uncouplers

Substances that can disrupt the coupling between the electron transport chain and ATP synthase, leading to increased respiration without ATP production.

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Uncoupling Agents

Molecules like 2,4-DNP or FCCP allow protons to cross the mitochondrial membrane without using ATP synthase. This disrupts the link between electron transport and ATP production.

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Uncoupled Respiration

The process where energy from the electron transport chain is used to generate heat instead of ATP. This occurs when protons leak across the membrane.

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Thermogenin (UCP1)

A protein channel in the inner mitochondrial membrane of brown fat cells, allowing protons to flow back into the matrix, generating heat instead of ATP.

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Brown Adipose Tissue (BAT)

A type of fat tissue that contains many mitochondria and is specialized for generating heat through uncoupled respiration.

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Study Notes

Oxidative Phosphorylation Introduction

  • Electron transport chain creates a higher proton concentration outside the mitochondrial matrix, a lower pH outside of the matrix.
  • This difference in concentration and charge is a source of stored energy called the proton motive force.
  • Excess protons flow back into the matrix through ATP synthase.
  • ATP synthase couples the flow of protons to ATP synthesis, from ADP and inorganic phosphate.
  • This process is called oxidative phosphorylation because it is powered by the oxidation of NADH and FADH2.

The Proton Motive Force

  • Electron transport chain pumps protons from the mitochondrial matrix to the intermembrane space.
  • This creates a lower pH in the intermembrane space than the matrix.
  • In healthy mammalian cells, the intermembrane space pH is approximately 7.4 and the matrix pH is ~7.8.
  • Differences in proton concentration creates a voltage.
  • The charge and concentration difference create an electrochemical gradient called the proton motive force (pmf).
  • Protons/ions cannot readily cross a phospholipid bilayer.
  • Proteins, channels or carriers are needed for this transport into the matrix (passive transport)
  • Active transport of protons out of the matrix, followed by passive transport back in is facilitated by ETC and ATP synthase.

ATP Synthase Mechanism

  • ATP synthase is also known as Complex V of the electron transport chain, and is a translocase enzyme.
  • It couples the transport of H+ down its gradient with ATP synthesis by chemiosmosis.
  • Structure includes F0 and F1 domains.
  • F0 is a transmembrane complex where protons flow.
  • Each c subunit in F0 binds a proton.
  • The rotation of the c subunits results in the rotation of the internal y subunit.
  • This rotation changes the conformation of the three αβ dimer complexes in F1 ,which converts ADP to ATP.

ATP Yield per Glucose

  • On average, one NADH yields 2.5 ATP, as 10 protons are pumped per NADH in the electron transport chain.
  • One FADH2 yields 1.5 ATP, as 6 protons are pumped per FADH2 in the electron transport chain.
  • Glycolysis produces 2 ATP,and 2 NADH.
  • Pyruvate oxidation produces 2 NADH.
  • The citric acid cycle produces 2 GTP, 6 NADH, 2 FADH2.
  • In total, glucose generates ~32 ATP molecules

Uncoupling of ATP Synthase

  • ATP synthase is coupled to the electron transport chain.
  • Uncouplers (e.g., 2,4-dinitrophenol (2,4-DNP), FCCP), allow protons to cross the inner mitochondrial membrane directly, bypassing ATP synthase.
  • This results in a decrease in ATP synthesis, as the proton gradient is not used for ATP production.
  • Heat is generated instead, which helps maintain temperature in endothermic organisms (warm blooded animals) in cold conditions by activating enzymes called thermogenin.

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