NGS Machines and DNA Sequencing Quiz
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Questions and Answers

What is the discrete probability distribution of the number of successes in a sequence of n independent experiments, each asking a yes–no question?

  • Poisson distribution
  • Normal distribution
  • Exponential distribution
  • Binomial distribution (correct)
  • What type of mutations alter the phenotype and kind of start the cancer?

  • Germline mutations
  • Driver mutations (correct)
  • Passenger mutations
  • Somatic mutations
  • What type of mutations have no impact on cancer and are not actionable?

  • Somatic mutations
  • Driver mutations
  • Passenger mutations (correct)
  • Germline mutations
  • What is the main source of errors in NGS machines resulting in noisy sequence reads?

    <p>Repetitive sequences in the genome</p> Signup and view all the answers

    What process involves taking the information and converting it to insights?

    <p>Tertiary analysis</p> Signup and view all the answers

    What are variations of a gene called?

    <p>Alleles</p> Signup and view all the answers

    What is the term used to describe variations of a gene?

    <p>Allele</p> Signup and view all the answers

    What type of distribution can be used to model Normal-Tumour Allelic Count Data?

    <p>Binomial distribution</p> Signup and view all the answers

    What does tertiary analysis involve?

    <p>Taking the information and converting it to insights</p> Signup and view all the answers

    What do driver mutations do in the context of cancer?

    <p>Alter phenotype and kind of start the cancer</p> Signup and view all the answers

    Study Notes

    Probability Distribution

    • The discrete probability distribution of the number of successes in a sequence of n independent experiments, each asking a yes–no question, is called the binomial distribution.

    Cancer and Mutations

    • Driver mutations alter the phenotype and can start cancer.
    • Passenger mutations have no impact on cancer and are not actionable.

    Next Generation Sequencing (NGS)

    • Errors in NGS machines, resulting in noisy sequence reads, are mainly due to sequencing errors.

    Data Analysis

    • Tertiary analysis involves taking the information and converting it to insights.

    Genetics

    • Variations of a gene are called alleles.
    • The term used to describe variations of a gene is allelic variation.

    Statistical Modeling

    • The beta-binomial distribution can be used to model Normal-Tumour Allelic Count Data.

    Cancer Biology

    • Driver mutations promote cancer development and progression.

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    Description

    Test your knowledge on the cost of raw DNA sequencing, error sources in NGS machines, alignment procedures, gene variations, and allelic count data modeling. This quiz covers topics related to NGS machines, DNA sequencing, gene variations, and allele counting.

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