Podcast
Questions and Answers
Viruses are generally considered to be living beings by most scientists.
Viruses are generally considered to be living beings by most scientists.
False (B)
The definition of life includes the ability to repair itself and to evolve.
The definition of life includes the ability to repair itself and to evolve.
True (A)
Life can be mathematically quantified with ease according to the discussed concepts.
Life can be mathematically quantified with ease according to the discussed concepts.
False (B)
The cell is considered the fundamental unit of all living organisms on Earth.
The cell is considered the fundamental unit of all living organisms on Earth.
Occam's razor suggests choosing the most complex solution to a problem.
Occam's razor suggests choosing the most complex solution to a problem.
Nucleic acids such as DNA and RNA are essential for life on our planet.
Nucleic acids such as DNA and RNA are essential for life on our planet.
Semi-replicators can exist in certain environmental situations if sufficient energy is provided.
Semi-replicators can exist in certain environmental situations if sufficient energy is provided.
Algorithms created in artificial environments are universally accepted as living beings.
Algorithms created in artificial environments are universally accepted as living beings.
Johann Gregor Mendel is known as the father of Molecular Biology.
Johann Gregor Mendel is known as the father of Molecular Biology.
Mendel first applied a mathematical model to describe hereditary transmission.
Mendel first applied a mathematical model to describe hereditary transmission.
The genetic traits referred to as 'Mendelian' are numerous and varied.
The genetic traits referred to as 'Mendelian' are numerous and varied.
Charles Darwin was familiar with Mendel's work during his lifetime.
Charles Darwin was familiar with Mendel's work during his lifetime.
The substance that transmits genetic characters was named 'gene' in 1909 by Wilhelm Johannsen.
The substance that transmits genetic characters was named 'gene' in 1909 by Wilhelm Johannsen.
Mendel died from complications related to heart disease.
Mendel died from complications related to heart disease.
Lucretius wrote about the transmission of phenotypic characters in the first century BC.
Lucretius wrote about the transmission of phenotypic characters in the first century BC.
Every living unit, such as a cell, is capable of replicating and evolving.
Every living unit, such as a cell, is capable of replicating and evolving.
DnaA is the protein that closes the two DNA strands during replication.
DnaA is the protein that closes the two DNA strands during replication.
DNA polymerase III synthesizes new DNA strands in the 3' -> 5' direction.
DNA polymerase III synthesizes new DNA strands in the 3' -> 5' direction.
The DnaB protein is part of the helicase family and plays a role in unwinding DNA strands.
The DnaB protein is part of the helicase family and plays a role in unwinding DNA strands.
The replication bubble forms as DnaB proteins move towards each other from opposite directions.
The replication bubble forms as DnaB proteins move towards each other from opposite directions.
Single-stranded binding proteins (SSBs) help to rejoin the DNA strands after replication.
Single-stranded binding proteins (SSBs) help to rejoin the DNA strands after replication.
Replication in prokaryotes is called semiconservative because it creates new strands from old templates.
Replication in prokaryotes is called semiconservative because it creates new strands from old templates.
The polymerases move in the same direction as the replication fork.
The polymerases move in the same direction as the replication fork.
Topoisomerase proteins are responsible for synthesizing the new strands of DNA.
Topoisomerase proteins are responsible for synthesizing the new strands of DNA.
Ribosomes are only found in eukaryotic cells and do not exist in prokaryotic cells.
Ribosomes are only found in eukaryotic cells and do not exist in prokaryotic cells.
The Rough Endoplasmic Reticulum is involved in lipid synthesis.
The Rough Endoplasmic Reticulum is involved in lipid synthesis.
The Golgi apparatus is responsible for determining the three-dimensional structure of proteins.
The Golgi apparatus is responsible for determining the three-dimensional structure of proteins.
Lysosomes are limited to digesting only harmful molecules in the cell.
Lysosomes are limited to digesting only harmful molecules in the cell.
Peroxisomes are involved in breaking down harmful molecules such as hydrogen peroxide.
Peroxisomes are involved in breaking down harmful molecules such as hydrogen peroxide.
Vacuoles in plant cells are primarily responsible for synthesizing proteins.
Vacuoles in plant cells are primarily responsible for synthesizing proteins.
Centrioles create the mitotic spindle to assist in chromosome separation during cell division.
Centrioles create the mitotic spindle to assist in chromosome separation during cell division.
Proteosomes are primarily involved in the synthesis of complex proteins.
Proteosomes are primarily involved in the synthesis of complex proteins.
Archaea are considered the first prokaryotes to have appeared on Earth.
Archaea are considered the first prokaryotes to have appeared on Earth.
Eukaryotic cells have simpler structures compared to archaebacteria.
Eukaryotic cells have simpler structures compared to archaebacteria.
The plasma membrane of archaebacteria is formed by phospholipids with stronger chemical bonds.
The plasma membrane of archaebacteria is formed by phospholipids with stronger chemical bonds.
Histones are proteins that assist in the regulation of DNA structure and activity in eukaryotic cells.
Histones are proteins that assist in the regulation of DNA structure and activity in eukaryotic cells.
The cytoskeleton is absent in eukaryotic cells.
The cytoskeleton is absent in eukaryotic cells.
The nucleus is the smallest organelle within a eukaryotic cell.
The nucleus is the smallest organelle within a eukaryotic cell.
Eukaryotic cells all have a wall formed by polysaccharides.
Eukaryotic cells all have a wall formed by polysaccharides.
The outer membrane of the nucleus is in direct contact with the cytoplasm.
The outer membrane of the nucleus is in direct contact with the cytoplasm.
The E pocket is present in Eukaryotic ribosomes.
The E pocket is present in Eukaryotic ribosomes.
Methionine is the first amino acid in Eukaryotic translation.
Methionine is the first amino acid in Eukaryotic translation.
Ribosomal proteins assist in the peptidyl-transferase activity in Eukaryotes.
Ribosomal proteins assist in the peptidyl-transferase activity in Eukaryotes.
EF-Tu is responsible for positioning aa-tRNAs on the ribosome in Eukaryotes.
EF-Tu is responsible for positioning aa-tRNAs on the ribosome in Eukaryotes.
The RER is where ribosomal subunits are synthesized.
The RER is where ribosomal subunits are synthesized.
The release factor eRF1 is involved in the recognition of stop codons in Eukaryotes.
The release factor eRF1 is involved in the recognition of stop codons in Eukaryotes.
Prokaryotes utilize a release factor similar to eRF1 for translation termination.
Prokaryotes utilize a release factor similar to eRF1 for translation termination.
The Shine-Dalgarno sequence is found in Eukaryotic mRNA molecules.
The Shine-Dalgarno sequence is found in Eukaryotic mRNA molecules.
Flashcards
Protein Synthesis
Protein Synthesis
The process of translating mRNA into a sequence of amino acids to create proteins.
Endoplasmic Reticulum (ER)
Endoplasmic Reticulum (ER)
A network of interconnected membranes in the cytoplasm. It's involved in the production and transportation of proteins and lipids.
Rough Endoplasmic Reticulum (RER)
Rough Endoplasmic Reticulum (RER)
A type of ER that contains ribosomes. Its main function is to synthesize and modify proteins.
Smooth Endoplasmic Reticulum (SER)
Smooth Endoplasmic Reticulum (SER)
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Golgi Apparatus
Golgi Apparatus
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Lysosomes
Lysosomes
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Peroxisomes
Peroxisomes
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Vacuoles
Vacuoles
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Genetics
Genetics
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Molecular Biology
Molecular Biology
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Phenotype
Phenotype
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Gregor Mendel
Gregor Mendel
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Genes
Genes
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Evolution by natural selection
Evolution by natural selection
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Heredity
Heredity
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Genetic Trait
Genetic Trait
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What is cell biology?
What is cell biology?
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Why aren't viruses considered living?
Why aren't viruses considered living?
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What is a semi-replicator?
What is a semi-replicator?
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What is Occam's razor?
What is Occam's razor?
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How is life described in terms of a physical system?
How is life described in terms of a physical system?
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What is a common definition of life?
What is a common definition of life?
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What is a cell?
What is a cell?
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Why are nucleic acids important for defining life?
Why are nucleic acids important for defining life?
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What are Archaebacteria?
What are Archaebacteria?
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What makes the cell membrane of Archaebacteria unique?
What makes the cell membrane of Archaebacteria unique?
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What are the defining characteristics of eukaryotic cells?
What are the defining characteristics of eukaryotic cells?
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What is the function of the nucleus in a eukaryotic cell?
What is the function of the nucleus in a eukaryotic cell?
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What is the cytoskeleton and its role in eukaryotic cells?
What is the cytoskeleton and its role in eukaryotic cells?
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What are organelles in eukaryotic cells?
What are organelles in eukaryotic cells?
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What are histones and their function?
What are histones and their function?
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What are lamin proteins and their role?
What are lamin proteins and their role?
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oriC
oriC
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DnaA protein
DnaA protein
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DnaB protein
DnaB protein
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SSB protein
SSB protein
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DNA polymerase III
DNA polymerase III
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Replication bubble
Replication bubble
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Semiconservative replication
Semiconservative replication
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5' to 3' direction
5' to 3' direction
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Peptidyl Transferase Activity in Eukaryotes
Peptidyl Transferase Activity in Eukaryotes
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Absence of E Site in Eukaryotes
Absence of E Site in Eukaryotes
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Translocation in Eukaryotes
Translocation in Eukaryotes
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Translation Termination in Eukaryotes
Translation Termination in Eukaryotes
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Ribosome Synthesis and Localization in Eukaryotes
Ribosome Synthesis and Localization in Eukaryotes
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Translation Initiation in Eukaryotes
Translation Initiation in Eukaryotes
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First Amino Acid in Eukaryotic Translation
First Amino Acid in Eukaryotic Translation
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Absence of Shine-Dalgarno Sequence in Eukaryotes
Absence of Shine-Dalgarno Sequence in Eukaryotes
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Study Notes
NutriGenΩics Overview
- Nutrigenomics is a valuable tool for introduction to the subject, presented in a concise format.
- The book is divided into three parts: Cellular Biology, Genomics, and Nutrigenomics.
- The material is designed for students with little to no prior experience in Cellular Biology and Genomics.
- Genomics is important for understanding the relationship between food and human/animal diseases.
- The bibliography is comprehensive to encourage further reading.
Table of Contents Details
- Contains a detailed list of topics covered in the book, including page numbers for each section.
- Topics span Cellular Biology (life, prokaryotes/eukaryotes, evolution), Genomics (DNA, RNA, genome size mechanisms), Molecular Biology (replication in prokaryotes/eukaryotes, transcription, translation, microRNA, transposons, epigenetics), and Nutrigenomics (nutrigenomics, origin of humans, diet evolution in humans, breeding, grain consumption and autoimmune conditions)
- Covers the technologies commonly used in genomics (PCR, RT-PCR, etc.)
Cellular Biology Details
- Discusses the basics of cells, prokaryotic and eukaryotic cells with their differences.
- Explains the structure of prokaryotic cells (Figure 1) and eukaryotic cells (Figure 4) and their components (Figure 5).
- Describes prokaryotic and eukaryotic flagella (Figure 6) and mitochondria (Figure 7), and ribosomes (Figure 8).
- Covers the endoplasmic reticulum (Figure 9) and Golgi apparatus (Figure 10).
- Discusses the function of vacuoles, peroxisomes, centrioles, and their roles in the cell (Figure 11).
- Includes a description of the cell wall in Gram positive and Gram negative bacteria (Figure 2).
Genomics Details
- Defines genomics as the study of the genome (DNA and RNA).
- Expands on the structure and variations of DNA (Figure 2.2).
- Covers RNA and discusses how it's synthesized from DNA.
- Details different types of RNA—including mRNA, rRNA, tRNA, and how these function in protein synthesis—explaining their role and differences from DNA.
- Describes the significance of gene duplication and expansion in genomic variations.
- Covers the mechanisms associated with altering genome-size.
Molecular Biology Details
- Explores replication in prokaryotic (Figure 18) and eukaryotic cells (Figure 20) in detail, including the key enzymes and steps involved in DNA replication, highlighting the difference between leading and lagging strands.
Nutrigenomics Details
- Defines Nutrigenomics and how it connects genomics to nutrition, studying the impact of food on human and animal populations (Figure 1)
- Explains the origin of humans, tracing their dietary evolution (meat eating and consumption of plants and seeds, the development of agriculture)
- Looks into the evolution of humans, from our earliest ancestors to how early humans' dietary habits influenced their genotypes/phenotypes (Figure 3).
ADH, AMY1, and LCT Mutations
- Details the roles of ADH, AMY1, and LCT genes in human evolution.
- Discusses the positive selection of mutations in these genes that have occurred in different human populations.
- Links the variations of these genetic factors to the frequency of consumption of particular nutrients, such as milk or grains.
Technologies in Genomics
- Discusses the techniques for studying genes and genomes, including Polymerase Chain Reaction (PCR), Reverse Transcription PCR (RT-PCR), Microarray technology, and Next-Generation Sequencing (NGS).
- Describes each technique and its advantages in detail.
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