Microbial Diversity Session 1: Bacterial Nomenclature

Choose a study mode

Play Quiz
Study Flashcards
Spaced Repetition
Chat to Lesson

Podcast

Play an AI-generated podcast conversation about this lesson

Questions and Answers

What factor largely determines whether bacteria are pathogenic?

  • The size of the bacterial colony
  • The age of the bacteria
  • The environment in which the bacteria are found (correct)
  • The temperature they are exposed to

Which of the following describes pleomorphic bacteria?

  • Bacteria that are only capable of aerobic respiration
  • Bacteria that exhibit uniform size and structure
  • Bacteria that remain the same shape under all conditions
  • Bacteria that can change shape depending on environmental conditions (correct)

Which method is used to classify bacteria based on their cell wall composition?

  • Gram staining (correct)
  • Genetic sequencing
  • Metabolic classification
  • Morphological classification

What do bacteria that can metabolize lactose indicate about their metabolic activity?

<p>They possess specific enzymes for lactose breakdown (A)</p> Signup and view all the answers

Which term refers to the classification of bacteria based on their observable characteristics?

<p>Phenotypic classification (B)</p> Signup and view all the answers

What is the role of the mosquito in the life cycle of Plasmodium?

<p>It acts as both a host and a vector. (C)</p> Signup and view all the answers

Which of the following is NOT a habitat where parasites can reside?

<p>Atmosphere (A)</p> Signup and view all the answers

From which of the following sources can parasitic infections NOT commonly originate?

<p>Sunlight (D)</p> Signup and view all the answers

What are endoparasites known for?

<p>Living within the host and causing infection (A)</p> Signup and view all the answers

How can cats contribute to the transmission of toxoplasmosis?

<p>By excreting the parasite in their feces. (B)</p> Signup and view all the answers

Why is it important for pregnant individuals to avoid contact with litter trays?

<p>It may result in exposure to parasites that cause miscarriages. (D)</p> Signup and view all the answers

Which of the following types of hosts is characterized as carrying a parasite but not necessarily showing symptoms of disease?

<p>Reservoir host (D)</p> Signup and view all the answers

What is a key feature that differentiates permanent parasites from temporary parasites?

<p>They are always fixed to the host (C)</p> Signup and view all the answers

In which type of host does the adult or sexually reproducing form of the parasite primarily live?

<p>Definitive host (B)</p> Signup and view all the answers

Opportunistic parasites are most likely to cause diseases in which type of hosts?

<p>Immunodeficient hosts (D)</p> Signup and view all the answers

What factor can result in some genes being absent in certain organisms due to their evolutionary history?

<p>Gene loss (A)</p> Signup and view all the answers

What mechanism allows unrelated bacteria to acquire resistance genes from others?

<p>Horizontal gene transfer (C)</p> Signup and view all the answers

How do Gram-positive bacteria generally develop resistance to Penicillin?

<p>By producing a binding protein that ignores the antibiotic (D)</p> Signup and view all the answers

Which of the following is NOT a component of functional diversity in microorganisms?

<p>Genetic (A)</p> Signup and view all the answers

What is a key reason why function and phylogenetic correlation may not always align?

<p>Convergent evolution (D)</p> Signup and view all the answers

What type of testing can be used to assess the metabolic activities of microorganisms?

<p>Biochemical testing (D)</p> Signup and view all the answers

How do Gram-negative bacteria primarily resist Penicillin?

<p>By employing an enzyme to break it down (C)</p> Signup and view all the answers

What type of environment can microorganisms inhabit?

<p>Any conceivable habitat (C)</p> Signup and view all the answers

How do fungi primarily grow and spread?

<p>By forming a mycelial network (D)</p> Signup and view all the answers

What is a method of asexual reproduction in yeast?

<p>Budding (C)</p> Signup and view all the answers

What enables mycelium to develop and disperse spores?

<p>Mitosis (C)</p> Signup and view all the answers

Which process introduces genetic variation in fungi?

<p>Meiosis (D)</p> Signup and view all the answers

Which factor is NOT mentioned as a potential driver for dimorphism in Ascomycetes?

<p>Changes in humidity (D)</p> Signup and view all the answers

What happens during sporulation?

<p>Spores disperse and grow (A)</p> Signup and view all the answers

In sexual reproduction of yeast, how many haploid ascospores are formed after meiosis?

<p>4 (D)</p> Signup and view all the answers

What best characterizes the spores produced by fungi?

<p>Sizes and shapes (B)</p> Signup and view all the answers

What can result from the feeding habits of a parasite?

<p>Nutrient deficiency in the host (D)</p> Signup and view all the answers

Which of the following statements about direct life cycles of parasites is true?

<p>They involve a single definitive host. (C)</p> Signup and view all the answers

What differentiates protozoa from metazoa in terms of classification?

<p>Protozoa are unicellular, while metazoa are multicellular. (C)</p> Signup and view all the answers

Which of the following is an example of a nematode?

<p>Haemonchus contortus (D)</p> Signup and view all the answers

What role do ticks play in relation to zoonotic diseases?

<p>They serve as vectors for diseases like Lyme disease. (B)</p> Signup and view all the answers

What is a common characteristic of arthropods?

<p>They possess an external skeleton. (B)</p> Signup and view all the answers

Which organism is classified as a systemic protozoan parasite?

<p>Plasmodium falciparum (C)</p> Signup and view all the answers

What is a defining feature of helminths?

<p>They are multicellular organisms. (A)</p> Signup and view all the answers

Which disease is caused by the protozoan Trypanosoma brucei?

<p>Sleeping sickness (A)</p> Signup and view all the answers

How do nematodes typically enter a new host?

<p>They are ingested through contaminated water. (C)</p> Signup and view all the answers

What is swine flu scientifically known as?

<p>H1N1 (A)</p> Signup and view all the answers

What type of parasite are fleas classified as?

<p>Arthropods (D)</p> Signup and view all the answers

What is a significant impact of viruses on human social behavior?

<p>Changes in travel behavior and health precautions. (B)</p> Signup and view all the answers

What is the primary concern regarding the governmental response to swine flu in Egypt?

<p>Killing all pigs despite them not being the source. (D)</p> Signup and view all the answers

Flashcards

Genus and Species

The scientific name for a bacterial species is composed of two parts: Genus and species. For example, Escherichia coli (E. coli).

Bacterial Naming

Bacterial names can be based on their appearance (shape, color), location (place or scientist who discovered it), or characteristics (food source or metabolic activity).

Bacterial Morphology

Bacterial morphology refers to the shape and structure of bacteria under a microscope. They can appear in various forms, like rods, spheres, or spirals.

Pleiomorphism

Pleiomorphic bacteria are those that can change their shape and structure depending on the environment they are in. This adaptability allows them to survive in different conditions.

Signup and view all the flashcards

Metabolic Activity

Bacteria can be categorized based on their metabolic activities, such as their ability to use oxygen for respiration, metabolize different types of sugars, or break down specific chemicals.

Signup and view all the flashcards

Endoparasite

A parasite that lives inside the host's body causing infection.

Signup and view all the flashcards

Ectoparasite

A parasite that lives on the external surface of the host causing infection.

Signup and view all the flashcards

Definitive Host

An animal where the adult or sexually reproducing form of the parasite lives.

Signup and view all the flashcards

Intermediate Host

An animal where the parasite lives during its larval stage or asexually reproducing form.

Signup and view all the flashcards

Vector

An organism that transmits a parasite from one organism to another.

Signup and view all the flashcards

Functional and Phylogenetic Correlation

The study of how the functions of organisms are related to their evolutionary history. It examines how genes, enzymes, and metabolic pathways have evolved and how these changes impact the organism's abilities and adaptations.

Signup and view all the flashcards

Gene Loss

The loss of certain genes over time during evolution, leading to differences in functionality between closely related organisms.

Signup and view all the flashcards

Convergent Evolution

The independent evolution of similar traits or functionalities in unrelated organisms.

Signup and view all the flashcards

Horizontal Gene Transfer

The process by which genetic material is exchanged between organisms that are not parent and offspring, commonly occurring in bacteria through plasmids.

Signup and view all the flashcards

Functional Diversity

The diverse range of functions, adaptations, and ways of life that microbes have developed.

Signup and view all the flashcards

Physiological Functional Diversity

Study of microbial functions through observing their metabolic processes and the molecules they produce.

Signup and view all the flashcards

Morphological Functional Diversity

Examining the physical characteristics of microorganisms through techniques like microscopy and staining.

Signup and view all the flashcards

Ecological Functional Diversity

The ecological niches and interactions microbes have with their environment and with other organisms.

Signup and view all the flashcards

Mycelial Network

A network of interconnected fungal filaments that spreads through the substrate, enabling the fungus to absorb nutrients and water.

Signup and view all the flashcards

Asexual Reproduction in Fungi

A type of fungal reproduction where the mycelium undergoes mitosis, creating copies of itself. This results in the production and dispersal of spores, which can germinate in suitable environments.

Signup and view all the flashcards

Sexual Reproduction in Fungi

A type of fungal reproduction involving the fusion of two mycelia to form spores. This introduces genetic variation and helps fungi adapt to changing environments.

Signup and view all the flashcards

Budding Yeast Reproduction

A method of asexual reproduction in yeast, where a parent cell produces a bud that grows into a new, identical cell.

Signup and view all the flashcards

Binary Fission Yeast Reproduction

A type of asexual reproduction in yeast, very similar to bacterial reproduction. The parent cell grows and divides into two identical daughter cells.

Signup and view all the flashcards

Sexual Reproduction in Yeast

A type of sexual reproduction in yeast where two diploid cells fuse, recombine their DNA, and produce four haploid ascospores, which can then germinate.

Signup and view all the flashcards

Sporulation

A process where fungi release spores into the environment. These spores can either germinate immediately or remain dormant until suitable conditions arise.

Signup and view all the flashcards

Dimorphic Fungi

Certain fungi can exist in both a hyphal (filamentous) form and a yeast-like form, switching between them in response to environmental changes.

Signup and view all the flashcards

What is a vector?

The organism that transmits a disease-causing agent from one host to another. For example, mosquitos transmit malaria from humans to other humans.

Signup and view all the flashcards

What is a habitat?

The dwelling place where an organism lives and thrives. For example, the human body provides a suitable habitat for many parasites.

Signup and view all the flashcards

What is an infection?

The process by which a parasite enters the host's body and establishes itself. This can be through various mechanisms.

Signup and view all the flashcards

What is pleiomorphism?

The ability of a parasite to adapt and change its form to survive in different environments. For example, some parasites can change their shape to fit inside different cells.

Signup and view all the flashcards

How can a parasite harm its host?

The damage caused by a parasite to its host, including illness, disease, or even death. This damage can happen through various mechanisms.

Signup and view all the flashcards

Parasite Blockages

A parasite's impact on the host's body can result in blockages due to a large number of parasites.

Signup and view all the flashcards

Site of Parasitism

The specific location within the host where a parasite lives and thrives.

Signup and view all the flashcards

Parasite Feeding Habits

The way a parasite feeds, which can lead to injuries or wounds on the host.

Signup and view all the flashcards

Nutritional Competition

When a parasite competes with its host for essential nutrients, depriving the host of necessary nutrition.

Signup and view all the flashcards

Direct Life Cycle

A parasite life cycle that involves only one host, with potential larval stages.

Signup and view all the flashcards

Indirect Life Cycle

A parasite life cycle that involves at least two hosts, with a definitive host and one or more intermediate hosts.

Signup and view all the flashcards

Protozoa

Microscopic, single-celled organisms that belong to the kingdom Protista, known for their heterotrophic nature and motility.

Signup and view all the flashcards

Metazoa

Multicellular organisms belonging to the kingdom Animalia, including worms, tapeworms, and flukes.

Signup and view all the flashcards

Arthropods

Invertebrate animals characterized by an exoskeleton, segmented bodies, and jointed appendages.

Signup and view all the flashcards

Acari

A group of arthropods that includes ticks, with four pairs of legs in adulthood and three pairs in larval stages.

Signup and view all the flashcards

Insecta

A group of arthropods that includes insects, characterized by three pairs of legs and three body regions.

Signup and view all the flashcards

Zoonoses

Diseases that can be transmitted from animals to humans.

Signup and view all the flashcards

Study Notes

  • Microbial diversity, bacteria, session 1, 2/12/2024

Bacterial Nomenclature

  • Bacteria can be beneficial or harmful; environment is critical
  • Bacteria have relationships with their environment
  • Bacteria can be classified as pathogenic or not

Bacterial Taxonomy/Nomenclature

  • Bacterial names have different origins
  • Scientists, places, colors
  • Staphylococcus aureus = grape-like clusters under microscope
  • Numerous ways to classify bacteria

Phenotypic Classifications

  • Cell morphology – appearance under microscope, movement
  • Pleiomorphic bacteria – change shape based on environment
  • Metabolic activity – respiration, lactose metabolism or alternative sources
  • Staining – distinguishing by cell wall or membrane, Gram staining
  • Pathogenicity – antibiotic and heavy metal resistance, toxins, harm

Nutritional needs

  • DNA based
  • G-C content

16S rRNA sequencing

  • Used to classify archaea and bacteria, useful to understand diversity
  • 16s has regions that vary depending on species or organism

18s RNA sequencing

  • Used to classify eukaryotic species (or organisms)

Metagenomics

  • Sequencing of the whole sample, looking at overall genetic variation
  • No need for culture, identifying organisms without isolating

Functional Diversity

  • Physiological functions – metabolism, biochemistry, and processes
  • Morphology – appearance on plates, under microscope, staining
  • Ecological role, interaction with other microbial species, environment

Microbial Habitats

  • Microbes are found everywhere
  • Thermophiles – thrive in high temperatures
  • Psychrophiles – thrive in low temperatures
  • Halophiles – thrive in high-salt environments

Diversity of Bacteria

  • 55 bacterial phyla
  • Many more are in Candidatus status

Bacteria Phyla

  • Proteobacteria
  • Alpha, beta, gamma, delta, epsilon, and zeta proteobacteria
  • Six classes
  • 1 Alphaproteobacteria
  • Many are anaerobic, prefer low-nutrition
  • 2 Betaproteobacteria
  • Can be nitrogen fixers
  • 3 Gammaproteobacteria

Classification of Bacteria

  • Shape
  • Growth needs (oxygen demand)
  • pH
  • Mode of nutrition
  • Osmotic pressure
  • Temperature
  • Number of flagella
  • Spore formation
  • Others

Bacterial Phyla – Specific Examples

  • Thermophilic phyla (e.g., Aquificae/Aquificota)
  • Have a flagella that enables motility
  • Don't have endospores
  • Most are chemolithoautotrophs – produce energy from chemical sources
  • Deinococcota
  • Very thick cell wall, two membranes
  • Heterotrophic
  • Strictly aerobic
  • Can resist ionizing and UV radiation

Chloroflexi/ Chloroflexota

  • Tend to be green due to proteins/chemicals inside
  • Lack an outer membrane
  • Generally, do not stain Gram positive but mostly negative
  • Found in moderate thermophiles (around 80 degrees Celcius)
  • Long and filamentous morphology

Cyanobacteria

  • Photosynthetic species
  • Often green from chlorophyll
  • Chlorophyll is present in carboxysomes – CO2 fixation occurs there
  • Responsible for free oxygen in the atmosphere
  • Found in aquatic and land environments

Spirochaetota

  • Spiral/helical shape
  • Almost all are Gram-negative
  • Majority are anaerobes or facultative anaerobes
  • Flagella helps them swim, which are called endo flagella
  • Treponema pallidum – syphilis, Borrelia burgdorferi – Lyme disease

Chlamydiota

  • Intracellular parasites
  • Require a host cell to reproduce
  • Stain gram negative
  • Unique life cycles, (elementary bodies, inclusion bodies)

Firmicutes

  • Gram-positive, very low GC content
  • Includes cocci bacteria
  • Many are facultative anaerobes
  • Some produce endospores for survival
  • Examples: bacteria used for cheese production

Bacteriodetes

  • Gram-negative
  • Many can break down complex polysaccharides
  • Are mostly obligate anaerobes
  • Found in animal intestines, but are generally commensal

Diversity of Archaea

  • Very recent research
  • Many are identified and characterized by more research

Studying That Suits You

Use AI to generate personalized quizzes and flashcards to suit your learning preferences.

Quiz Team

Related Documents

More Like This

Tassonomia Batterica e Microrganismi
109 questions
Bacterial Nomenclature Quiz
10 questions
Use Quizgecko on...
Browser
Browser