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Questions and Answers

What is the role of diacylglycerol in the biosynthesis of triacylglycerols?

  • It is a breakdown product of triacylglycerols.
  • It inhibits the activity of lipases.
  • It serves as a precursor for various lipid molecules. (correct)
  • It is synthesized only in the intestines.

In which tissues does the majority of triacylglycerol biosynthesis occur?

  • Muscle and kidney tissues.
  • Adipose tissue, liver, and intestines. (correct)
  • Brain and heart tissues.
  • Skin and lung tissues.

What enzyme is responsible for the conversion of diacylglycerol into triacylglycerol?

  • Glycerol-3-phosphate dehydrogenase.
  • Phospholipase.
  • Diacylglycerol acyltransferase. (correct)
  • Acyl-CoA synthetase.

How does triacylglycerol produced from dietary intake differ from that synthesized in tissues?

<p>Dietary triacylglycerol is broken down to 2-monoacylglycerols first. (D)</p> Signup and view all the answers

What is the function of glycerol-3-phosphate dehydrogenase in lipid metabolism?

<p>It reduces dihydroxyacetone phosphate to glycerol-3-phosphate. (D)</p> Signup and view all the answers

What is the rate-limiting step in cholesterol biosynthesis?

<p>Formation of 3R-mevalonate from HMG-CoA (A)</p> Signup and view all the answers

Which intermediates are produced during the conversion of mevalonate in the cholesterol biosynthesis pathway?

<p>Isopentenyl pyrophosphate and dimethylallyl pyrophosphate (D)</p> Signup and view all the answers

What is the final product formed from the cyclization of squalene in cholesterol biosynthesis?

<p>Cholesterol (D)</p> Signup and view all the answers

What is the initial substrate for the synthesis of mevalonate in cholesterol biosynthesis?

<p>Acetyl-CoA (C)</p> Signup and view all the answers

During cholesterol biosynthesis, how many distinct processes are involved in its pathway?

<p>Three (B)</p> Signup and view all the answers

What are lipids primarily classified based on?

<p>Their chemical structure (A)</p> Signup and view all the answers

Which of the following lipids are essential components of membrane structure?

<p>Glycerophospholipids (D)</p> Signup and view all the answers

What does 'glycolipid' refer to in lipid classification?

<p>Lipids containing carbohydrate moieties (A)</p> Signup and view all the answers

Which class of lipids includes sphingomyelins?

<p>Phospholipids (D)</p> Signup and view all the answers

What role do lipids generally have in biological membranes?

<p>Providing structural support and stability (B)</p> Signup and view all the answers

Which of the following is NOT a characteristic of phospholipids?

<p>They are composed of glycerol and fatty acids only (C)</p> Signup and view all the answers

Which statement best describes the role of isoprenoids?

<p>They serve as precursors for various biological molecules (C)</p> Signup and view all the answers

Which type of lipid is primarily involved in energy storage?

<p>Triglycerides (D)</p> Signup and view all the answers

What is the role of ceramide in sphingolipid biology?

<p>It serves as a building block for other sphingolipids. (A)</p> Signup and view all the answers

Which molecule is produced by transferring phosphocholine from phosphatidylcholine?

<p>Sphingomyelin (A)</p> Signup and view all the answers

Which carbohydrate interacts with galactose as indicated in the content?

<p>Glucose (D)</p> Signup and view all the answers

What type of biological molecule is ceramide classified as?

<p>Sphingolipid (B)</p> Signup and view all the answers

Which plant condition is suggested for the introduction of a double bond into fatty acyl chains?

<p>Activation of mixed function oxidase (B)</p> Signup and view all the answers

What is the primary configuration of the fatty acyl chain mentioned?

<p>Combination of double and single bonds (A)</p> Signup and view all the answers

Which of the following describes sphingomyelin?

<p>It is synthesized from phosphocholine. (B)</p> Signup and view all the answers

Which of the following statements about fatty acyl chains is true?

<p>They may include both single and double bonds. (C)</p> Signup and view all the answers

What is the role of CDP-diacylglycerol in eukaryotic cells?

<p>To serve as a precursor for phospholipids (C)</p> Signup and view all the answers

Which of the following is generated from the condensation of palmitoyl-CoA and serine?

<p>Sphinganine (A)</p> Signup and view all the answers

What function does CMP serve in the activation of CDP-diacylglycerol?

<p>A good leaving group (B)</p> Signup and view all the answers

What type of molecule is CDP-diacylglycerol classified as?

<p>High energy molecule (B)</p> Signup and view all the answers

Which phospholipid is NOT derived from CDP-diacylglycerol?

<p>Sphingomyelin (B)</p> Signup and view all the answers

What is the final product of the reduction of β-ketosphinganine?

<p>N-acylsphinganine (D)</p> Signup and view all the answers

Which of the following processes involves the hydrolysis of CDP-diacylglycerol?

<p>Precursor formation for phospholipids (D)</p> Signup and view all the answers

Which enzyme is involved in synthesizing β-ketosphinganine?

<p>Sphinganine synthase (D)</p> Signup and view all the answers

What molecule is produced when glycerol is phosphorylated by glycerokinase?

<p>Glycerol-3-phosphate (A)</p> Signup and view all the answers

Which enzyme catalyzes the reversible formation of phosphatidic acid from diacylglycerol?

<p>Diacylglycerol kinase (A)</p> Signup and view all the answers

In eukaryotic systems, which molecule can be used as a starting point for synthesizing phosphatidic acid?

<p>Dihydroxyacetone phosphate (C)</p> Signup and view all the answers

Which of the following statements about phosphatidic acid synthesis is NOT true?

<p>Phosphatidic acid cannot be formed by phosphatases. (A)</p> Signup and view all the answers

What is the role of acyl-CoA in phosphatidic acid synthesis?

<p>It transfers acyl groups to phosphatidic acid. (C)</p> Signup and view all the answers

What provides the phosphate group in the formation of phosphatidic acid?

<p>ATP (D)</p> Signup and view all the answers

When glycerol-3-phosphate is acylated, which positions are modified?

<p>1 and 2 (A)</p> Signup and view all the answers

What is produced by the action of a phosphatase in the context of phosphatidic acid?

<p>Diacylglycerol (A)</p> Signup and view all the answers

Which of the following molecules is a precursor for the synthesis of phosphatidic acid?

<p>Fatty acyl-CoA (D)</p> Signup and view all the answers

How is phosphatidic acid described in terms of its formation from glycerol-3-phosphate?

<p>It is synthesized through the acylation process. (C)</p> Signup and view all the answers

What is the primary function of fat in biological systems?

<p>Generating and storing energy (C)</p> Signup and view all the answers

In terms of energy expenditure during exercise, which energy source is primarily utilized first?

<p>Glycogen (A)</p> Signup and view all the answers

Which characteristic of lipids is essential for biological membranes?

<p>Hydrophobic nature (C)</p> Signup and view all the answers

What role do fats play in relation to thermal insulation?

<p>They provide insulation in cells (C)</p> Signup and view all the answers

Which of the following processes is linked to the storage of energy in fat cells?

<p>Lipogenesis (B)</p> Signup and view all the answers

Which statement about the function of lipids is incorrect?

<p>Lipids act solely as energy sources. (C)</p> Signup and view all the answers

What dual purpose do fats serve in animal cells?

<p>Energy storage and maintaining cell membrane integrity (B)</p> Signup and view all the answers

What is a consequence of excessive fat storage in cells?

<p>Potential development of metabolic disorders (A)</p> Signup and view all the answers

What is the primary advantage of storing energy as fatty acids compared to sugars or amino acids?

<p>Fatty acids yield more ATP upon oxidation. (C)</p> Signup and view all the answers

Which of the following statements about fats is incorrect?

<p>Fats are soluble in water and easily transported. (D)</p> Signup and view all the answers

What role do bile salts play in lipid metabolism?

<p>They emulsify fats for better absorption. (B)</p> Signup and view all the answers

Why can fatty acids pack more closely in storage tissues compared to monosaccharides?

<p>Fatty acids are non-polar and less hydrated. (D)</p> Signup and view all the answers

What ultimately happens to dietary fats after absorption?

<p>They are typically stored in adipose tissue. (C)</p> Signup and view all the answers

What is the main characteristic that distinguishes fatty acids from sugars in terms of energy storage?

<p>Fatty acids are almost completely reduced. (D)</p> Signup and view all the answers

What is the primary source of fats in the human diet?

<p>Triglycerides released from food. (A)</p> Signup and view all the answers

How do fatty acids contribute to thermogenesis in brown adipocytes?

<p>By releasing energy through direct oxidation. (C)</p> Signup and view all the answers

What is the primary location where very-long-chain fatty acids begin β-oxidation?

<p>Peroxisomes (C)</p> Signup and view all the answers

How does the process of β-oxidation in peroxisomes differ from that in mitochondria?

<p>It does not produce ATP. (B)</p> Signup and view all the answers

What is produced during the first step of β-oxidation in peroxisomes?

<p>Hydrogen peroxide (C)</p> Signup and view all the answers

Which of the following statements about ω-oxidation is true?

<p>It serves as an alternative pathway in some animal species. (A)</p> Signup and view all the answers

Which biochemical molecule does β-oxidation in mitochondria reduce during its initial step?

<p>Ubiquinone (B)</p> Signup and view all the answers

What is the effect of hydrogen peroxide generated in peroxisomes during β-oxidation?

<p>It is a harmful byproduct. (B)</p> Signup and view all the answers

Why might fatty acid oxidation in peroxisomes be less energy-efficient than in mitochondria?

<p>It doesn't generate ATP. (A)</p> Signup and view all the answers

What unique property distinguishes the β-oxidation occurring in peroxisomes from that in mitochondria?

<p>It produces hydrogen peroxide rather than ATP. (B)</p> Signup and view all the answers

Which type of fatty acids is activated to form palmitoyl-CoA?

<p>Saturated fatty acids (D)</p> Signup and view all the answers

How many cycles are needed to convert palmitoyl-CoA into acetyl-CoA?

<p>7 cycles (B)</p> Signup and view all the answers

What is the ATP yield from the oxidation of 8 acetyl-CoA in the TCA cycle?

<p>80 ATP (D)</p> Signup and view all the answers

What is produced from the oxidation of 7 FADH2?

<p>10.5 ATP (D)</p> Signup and view all the answers

Which enzyme is associated with carnitine metabolism in fatty acid transport?

<p>Carnitine palmitoyltransferase I (B)</p> Signup and view all the answers

What is the primary product of the fatty acid oxidation step involving palmitoyl-CoA?

<p>Acetyl-CoA (B)</p> Signup and view all the answers

In the process of fatty acid oxidation, how many equivalents of NADH are generated from 8 acetyl-CoA?

<p>7 (D)</p> Signup and view all the answers

Which fatty acid chain length is associated with peroxisomal oxidation?

<p>C4 or less (D)</p> Signup and view all the answers

What is the role of CoA-SH in the reaction involving the conversion of palmitoyl-CoA?

<p>Acyl group carrier (C)</p> Signup and view all the answers

What molecule is created along with other products when palmitoyl-CoA reacts with 7 NAD+?

<p>NADH (D)</p> Signup and view all the answers

What can acetyl-CoA be readily converted into?

<p>Fatty acids (B)</p> Signup and view all the answers

Which transport mechanism is primarily involved in moving acetyl-CoA out of mitochondria?

<p>Citrate/malate antiporter (B)</p> Signup and view all the answers

What is NOT a product of acetyl-CoA metabolism?

<p>Glucose (B)</p> Signup and view all the answers

What molecule serves as an electron donor for fatty acid synthesis?

<p>NADH (A)</p> Signup and view all the answers

What process does pyruvate dehydrogenase primarily facilitate?

<p>Decarboxylation of pyruvate to acetyl-CoA (A)</p> Signup and view all the answers

Which molecule is a key high-energy metabolite generated in glycolysis?

<p>NADH (A)</p> Signup and view all the answers

How are the reductive equivalents supplied for fatty acid synthesis from acetyl-CoA?

<p>Through NADH generated from glycolysis (D)</p> Signup and view all the answers

Which of the following is a necessary component in the transport of acetyl-CoA from mitochondria to cytosol?

<p>Citrate (B)</p> Signup and view all the answers

Which molecule is primarily utilized as a carbon source for the synthesis of fatty acids from acetyl-CoA?

<p>Citrate (D)</p> Signup and view all the answers

What is the primary role of cytochrome b5 in the desaturation reaction?

<p>To deliver electrons from NADH to the desaturase (D)</p> Signup and view all the answers

Which molecules are involved in the reduction of Fe3+ to Fe2+ during fatty acid desaturation?

<p>NADH and cytochrome b5 (B)</p> Signup and view all the answers

What is the overall outcome of the fatty acyl desaturation cycle in terms of electron transfer?

<p>Four electrons are transferred overall (C)</p> Signup and view all the answers

What is the effect of malonyl CoA on fatty acid transport?

<p>It inhibits carnitine acyl transferase (D)</p> Signup and view all the answers

Which signal promotes the dephosphorylation and activation of ACC?

<p>Insulin (A)</p> Signup and view all the answers

Which of the following serves as an allosteric modulator of acetyl-CoA carboxylase?

<p>Long-chain fatty acids (A)</p> Signup and view all the answers

What is produced as a byproduct of the fatty acyl desaturation process?

<p>H2O (B)</p> Signup and view all the answers

What initiates the phosphorylation of ACC leading to its inhibition?

<p>AMP-activated protein kinase activity (C)</p> Signup and view all the answers

What role does O2 play in the fatty acyl desaturation cycle?

<p>O2 acts as the terminal electron acceptor (D)</p> Signup and view all the answers

Which enzyme is activated by the action of insulin related to fatty acid synthesis?

<p>Citrate lyase (B)</p> Signup and view all the answers

What is the purpose of dephosphorylating glucose-6-phosphate in the liver?

<p>To facilitate transport out of the liver (A)</p> Signup and view all the answers

What is the catalytic mechanism of glycogen phosphorylase designed to achieve?

<p>Phosphorolysis of glycogen to conserve ATP (C)</p> Signup and view all the answers

What happens to the active site of glycogen phosphorylase during its action?

<p>It is faced towards the ER lumen (C)</p> Signup and view all the answers

What is the primary product of the reaction catalyzed by glucose-6-phosphate?

<p>Glucose (B)</p> Signup and view all the answers

Which of the following statements is true about the treatment of glucose-6-phosphate?

<p>It is dephosphorylated for transport out of the liver (B)</p> Signup and view all the answers

What is the primary function of glycogen phosphorylase in glycogen metabolism?

<p>Degrades glycogen to release glucose (B)</p> Signup and view all the answers

What role does glycogen synthase play in glycogen metabolism?

<p>Adds glucose to existing glycogen chains (D)</p> Signup and view all the answers

What is the function of branching and debranching enzymes in glycogen metabolism?

<p>Modify glycogen at α-1,6 and α-1,4 linkages (C)</p> Signup and view all the answers

Which type of linkage does glycogen branching enzyme primarily form?

<p>α-1,6 glycosidic linkage (D)</p> Signup and view all the answers

What structural feature distinguishes the nonreducing ends of glycogen chains?

<p>They are terminal glucose units available for modification (D)</p> Signup and view all the answers

What is the role of pyridoxal phosphate (PLP) in glycogen phosphorylase activity?

<p>It forms a Schiff base with a lysine side chain. (C)</p> Signup and view all the answers

Which statement best describes the function of the 5'-phosphate group of PLP in relation to glycogen phosphorylase?

<p>It serves as a proton donor and then a proton acceptor. (A)</p> Signup and view all the answers

What structural feature does glycogen phosphorylase have that is essential for its function?

<p>It is a dimer of two identical subunits. (C)</p> Signup and view all the answers

Which of the following best describes the catalytic function of glycogen phosphorylase?

<p>It cleaves glucose units from glycogen through a phosphorylase mechanism. (B)</p> Signup and view all the answers

What is the correct sequence of events that occurs when glycogen phosphorylase is activated?

<p>Formation of Schiff base, followed by substrate cleavage. (B)</p> Signup and view all the answers

What happens when blood glucose levels rise significantly?

<p>Insulin is released to lower blood glucose levels. (B)</p> Signup and view all the answers

What is the primary role of glucagon in blood glucose regulation?

<p>To trigger glycogen breakdown into glucose. (A)</p> Signup and view all the answers

Which condition is associated with hypoglycemia?

<p>Fatigue and lethargy. (C)</p> Signup and view all the answers

What triggers the release of epinephrine during stress?

<p>Activation of the adrenal medulla by neural stimulation. (C)</p> Signup and view all the answers

What role does the pituitary gland play in hormonal control?

<p>It coordinates hormonal signals from the hypothalamus. (A)</p> Signup and view all the answers

What is the primary effect of insulin on glucose in the body?

<p>It enhances the uptake of glucose by cells. (A)</p> Signup and view all the answers

Which of the following states is defined by high blood glucose levels?

<p>Hyperglycemia. (B)</p> Signup and view all the answers

Why is maintaining blood glucose levels critical for brain function?

<p>Glucose is the main energy source for brain cells. (C)</p> Signup and view all the answers

What is the primary mechanism through which glycogen degradation occurs?

<p>Phosphorylative cleavage of nonreducing ends (C)</p> Signup and view all the answers

Which enzyme is crucial for the synthesis of glycogen from glucose?

<p>Glycogen synthase (C)</p> Signup and view all the answers

What type of bonds primarily connect glucose units in the synthesis of glycogen?

<p>Alpha-1,4 glycosidic bonds (B)</p> Signup and view all the answers

What advantage do the numerous branch points in glycogen provide?

<p>It allows for quicker degradation of the polymer. (B)</p> Signup and view all the answers

What role does the debranching enzyme serve in glycogen metabolism?

<p>It cleaves both alpha-1,4 and alpha-1,6 bonds. (C)</p> Signup and view all the answers

Which statement accurately describes the nonreducing ends of glycogen?

<p>They represent the points where glycogen is cleaved during degradation. (C)</p> Signup and view all the answers

What is generated during glycogen degradation at the nonreducing ends?

<p>Glucose-1-phosphate (B)</p> Signup and view all the answers

What is the function of glycogen phosphorylase in glycogen metabolism?

<p>It catalyzes the release of glucose from branched glycogen. (B)</p> Signup and view all the answers

Which component acts as a substrate for both glycogen degradation and synthesis?

<p>Glucose-1-phosphate (D)</p> Signup and view all the answers

What type of reaction generates glucose-6-phosphate from glycogen?

<p>Hydrolysis (C)</p> Signup and view all the answers

What is the effect of glucose binding to glycogen phosphorylase a?

<p>It promotes dephosphorylation to glycogen phosphorylase b. (B)</p> Signup and view all the answers

Which of the following correctly represents a step in glycogen degradation?

<p>Rearranging glycogen for continued breakdown. (D)</p> Signup and view all the answers

What is the primary advantage of phosphorolytic cleavage during glycogenolysis?

<p>It releases glucose 1-phosphate while phosphorylating it. (B)</p> Signup and view all the answers

What is the purpose of the transferase enzyme in glycogen breakdown?

<p>It transfers glucose from the inner chain to the outer branches. (D)</p> Signup and view all the answers

Which statement accurately describes α-1,6-glucosidase activity?

<p>It hydrolyzes α(1,6) glycosidic bonds to release free glucose. (B)</p> Signup and view all the answers

What type of enzyme combines the transferase and α-1,6-glucosidase activities in eukaryotes?

<p>A bifunctional enzyme. (B)</p> Signup and view all the answers

Which compound is released during phosphorolytic cleavage of glycogen?

<p>Glucose 1-phosphate. (C)</p> Signup and view all the answers

Why is the equilibrium in glycogen degradation shifted towards the products?

<p>Because of the high ratio of inorganic phosphate to glucose 1-phosphate. (C)</p> Signup and view all the answers

Which molecule ultimately serves as the substrate for the action of glycogen phosphorylase?

<p>Glycogen. (C)</p> Signup and view all the answers

What process occurs after glucose 1-phosphate is released from glycogen?

<p>Conversion to glucose 6-phosphate for energy production. (D)</p> Signup and view all the answers

Flashcards

Lipid Classes

Lipids are categorized based on their chemical structures.

Energy Storage Lipids

Some lipids store and generate energy.

Membrane Lipids

Lipids form biological membranes.

Glycerol Backbone

Glycerol is a common component of some lipids.

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Fatty Acids

Fatty acids are components of lipids involved in energy storage.

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Phospholipids

Phospholipids are essential membrane components, including glycerophospholipids and sphingomyelins.

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Glycerophospholipids

A class of phospholipids based on a glycerol backbone.

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Sphingomyelins

A class of phospholipids with a sphingosine backbone.

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Dihydroxyacetone phosphate (DHAP)

A sugar phosphate intermediate in glycolysis that can be converted to glycerol-3-phosphate.

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Glycerol-3-phosphate dehydrogenase

An enzyme that catalyzes the reduction of dihydroxyacetone phosphate (DHAP) to glycerol-3-phosphate.

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Phophatidic acid

It's an intermediate in the biosynthesis of phospholipids and triacylglycerols and contains a phosphate group attached to the backbone.

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Diacylglycerol

A lipid containing two fatty acid chains attached to a glycerol backbone.

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Triacylglycerol synthesis in intestines

Intestinal triacylglycerol synthesis starts with 2-monoacylglycerol, which is acylated by acyltransferases to form triacylglycerols.

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Glycerol-3-phosphate

A molecule formed by the phosphorylation of glycerol by the enzyme glycerokinase, serving as a crucial precursor for the synthesis of phosphatidic acid.

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Acylation

The process of attaching a fatty acyl group to a molecule, usually to a glycerol backbone, involving the transfer of an acyl group from acyl-CoA to a specific carbon atom.

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What forms Phosphatidic Acid?

Phosphatidic Acid can be formed through two main pathways: (1) acylation of glycerol-3-phosphate with two fatty acyl groups or (2) degradation of triacylglycerol.

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CDP-diacylglycerol

A high-energy molecule that serves as a precursor for phospholipids, containing diacylglycerol and cytidine diphosphate.

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What makes CDP-diacylglycerol reactive?

The presence of the cytidine diphosphate (CDP) group makes it a good substrate for reactions. It's a good leaving group, facilitating the addition of other groups.

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Palmitoyl-CoA

A fatty acid molecule attached to coenzyme A, crucial for the synthesis of sphingolipids by providing the necessary fatty acid chain.

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β-ketosphinganine Synthase

An enzyme that catalyzes the condensation of palmitoyl-CoA and serine, forming β-ketosphinganine, a precursor to sphingosine.

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β-ketosphinganine Reductase

An enzyme that reduces β-ketosphinganine to sphinganine, involving NADPH as a reducing agent.

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Sphingolipids

A class of lipids containing a sphingosine backbone, a fatty acid, and a variable head group, involved in diverse cellular functions.

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Ceramide

The simplest sphingolipid, comprised of a sphingosine backbone linked to a fatty acid.

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Cerebrosides

A type of sphingolipid with a single sugar molecule attached to the ceramide backbone.

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Fatty Acyl Chain Modification

Introducing a double bond into a fatty acyl chain changes its physical properties, influencing membrane fluidity and function.

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Mixed-function oxidase

An enzyme involved in fatty acyl chain modification. It incorporates oxygen into molecules, making them more reactive.

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Fatty Acyl Chain Attachment

Fatty acyl chains can be attached to the N atom of a Glycine molecule.

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Galactose Activation

Galactose needs to be activated by phosphorylation before it can be used in the synthesis of cerebrosides.

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What is Cholesterol's Role?

Cholesterol plays a vital role in cell membranes, serving as a structural component. It also acts as a precursor for essential molecules like steroid hormones and bile salts.

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How is Mevalonate Formed?

Mevalonate is synthesized from two-carbon units of acetyl-CoA. This process occurs in the cytosol and is vital for cholesterol biosynthesis.

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What's the Rate-Limiting Step?

HMG-CoA reductase is the enzyme responsible for the rate-limiting step in cholesterol biosynthesis. It converts HMG-CoA to mevalonate.

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What are the Key 5-Carbon Intermediates?

Isopentenyl pyrophosphate and dimethylallyl pyrophosphate are essential 5-carbon intermediates in the biosynthesis of squalene, a precursor to cholesterol.

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How is Squalene Formed?

Squalene is synthesized from two farnesyl pyrophosphate molecules. Farnesyl pyrophosphate is itself formed from isopentenyl pyrophosphate and dimethylallyl pyrophosphate.

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Acylation (in lipid biosynthesis)

The process of attaching a fatty acyl group (from an acyl-CoA molecule) to a molecule, typically a glycerol backbone. This is a key step in building lipids like phosphatidic acid.

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How is phosphatidic acid formed?

Phosphatidic acid can be synthesized through two main routes: 1) acylation of glycerol-3-phosphate with two fatty acyl groups. 2) degradation of triacylglycerol.

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What is the role of diacylglycerol kinase?

Diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form phosphatidic acid, playing a crucial role in lipid metabolism.

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Why is phosphatidic acid a key intermediate?

It plays a role in both the synthesis of triacylglycerols and phospholipids. These lipids are essential for energy storage and cell membrane structure.

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Why is glycerol-3-phosphate important?

Glycerol-3-phosphate is the precursor for phosphatidic acid, a key intermediate in the biosynthesis of both triacylglycerols and phospholipids

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Energy sources during exercise

The body utilizes different energy sources during exercise, with the primary source depending on the intensity and duration of the activity. Initially, glycogen provides immediate energy, followed by fat for prolonged exercise.

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Fat storage and function

Fat serves a critical role in energy storage and also aids in the formation of cell membranes and signaling molecules.

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What makes fat a good energy store?

Fat molecules contain more energy per gram compared to other sources like carbohydrates, making them an efficient energy reserve for the body.

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Thermal insulator

Fat acts as a thermal insulator, helping to regulate body temperature and protect against extreme conditions.

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Glycerol and fatty acids

Fat molecules are composed of glycerol, a simple sugar alcohol, and fatty acids, long hydrocarbon chains.

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Acyltransferases

Acyltransferases are enzymes that catalyze the addition of fatty acids to glycerol, forming triacylglycerols (fats) for energy storage.

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Energy Storage in Fatty Acids

Fatty acids store more energy per carbon atom than sugars or amino acids due to their highly reduced state. This means more ATP can be generated from their oxidation.

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Packing Efficiency of Fats

Fats are less hydrated than carbohydrates, allowing them to pack more densely in storage tissues, making them efficient for energy storage.

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Primary Sources of TAGs

Triacylglycerols (TAGs) are the major form of stored lipids in our bodies. They come from two sources: our diet and de novo synthesis in the liver.

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Emulsification of Dietary Fats

Dietary fats are insoluble in water, so they need to be emulsified (broken down into smaller droplets) by bile salts or complexed with proteins as lipoproteins for absorption.

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Adipose Cells: Fat Storage

Adipocytes, or fat cells, are specialized cells that store triacylglycerols (TAGs) as energy reserves.

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What makes fatty acids good for energy storage?

Their high reduction state allows them to yield more ATP upon oxidation compared to sugars or amino acids.

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Why are fats good for storage?

They are less hydrated and pack more efficiently than carbohydrates, making them suitable for long-term energy storage.

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How do we get TAGs?

We obtain TAGs from our diet and our body can also synthesize them in the liver.

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Short-Chain Fatty Acids

Fatty acids with a carbon chain length of 4 carbons or less. They are readily absorbed and metabolized in the body.

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Medium-Chain Fatty Acids

Fatty acids with a carbon chain length of 6 to 12 carbons. They are easily absorbed and can be directly used as fuel by the body.

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Fatty Acid Beta-Oxidation

The process that breaks down fatty acids into two-carbon units (acetyl-CoA) that can be used for energy production in the mitochondria.

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Carnitine

A molecule that helps transport long-chain fatty acids into the mitochondria for beta-oxidation.

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Acetyl-CoA

A two-carbon molecule that is a key product of fatty acid beta-oxidation and can be used in the citric acid cycle for energy production.

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ATP Yield from Fatty Acid Oxidation

The breakdown of fatty acids results in the production of a significant amount of ATP, making them efficient energy stores.

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Saturated Fatty Acids

Fatty acids with no double bonds between carbon atoms. They are typically solid at room temperature.

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Unsaturated Fatty Acids

Fatty acids with one or more double bonds between carbon atoms. They are typically liquid at room temperature.

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Odd-Numbered Carbon Chains

Fatty acids with an odd number of carbon atoms. Their breakdown produces propionyl-CoA, which can be converted to glucose.

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Fatty Acid Activation

The process of attaching a fatty acid to Coenzyme A to create a fatty acyl-CoA molecule. This activates the fatty acid for metabolism.

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Fatty Acid Desaturation

The process of introducing a double bond into a fatty acid chain, changing its physical properties and impacting membrane fluidity.

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Desaturase Enzyme

The enzyme responsible for catalyzing the desaturation reaction in fatty acid chains, adding a double bond.

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Role of Cytochrome b5

A protein that carries electrons from NADH to the desaturase enzyme, facilitating the desaturation reaction.

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O2 in Desaturation

Oxygen acts as the final electron acceptor in the fatty acid desaturation cycle.

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Insulin's Impact on Fatty Acid Synthesis

Insulin stimulates glucose uptake and activates enzymes involved in fatty acid synthesis, leading to more fat production.

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Role of Acetyl-CoA Carboxylase (ACC)

An enzyme crucial for fatty acid synthesis, catalyzing the conversion of acetyl-CoA to malonyl-CoA, a key building block for fatty acids.

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Malonyl-CoA's Inhibitory Effect

Malonyl-CoA inhibits carnitine acyltransferase, preventing fatty acids from entering mitochondria and being burned for energy.

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Citrate's Role in ACC Regulation

Citrate acts as an allosteric activator of ACC, promoting fatty acid synthesis.

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Long Chain Fatty Acids and ACC

Long chain fatty acids act as allosteric inhibitors of ACC, reducing fatty acid synthesis.

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AMP-Activated Protein Kinase (AMPK)

An enzyme that inhibits ACC by phosphorylation, reducing fatty acid synthesis.

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Peroxisome β-oxidation

The breakdown of very long-chain fatty acids in peroxisomes, almost identical to mitochondrial β-oxidation but producing hydrogen peroxide instead of reducing ubiquinone.

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ω-oxidation

An alternative pathway for fatty acid degradation that occurs in some animal species, primarily breaking down fatty acids at their terminal methyl end.

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Hydrogen peroxide production

A characteristic feature of β-oxidation in peroxisomes, where hydrogen peroxide is formed instead of reducing ubiquinone as seen in mitochondria.

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How does peroxisome β-oxidation differ from mitochondrial β-oxidation?

Peroxisome β-oxidation produces hydrogen peroxide instead of reducing ubiquinone, while both processes are nearly identical in other steps.

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Why is ω-oxidation an alternative pathway?

ω-oxidation offers an alternative method for breaking down fatty acids, particularly useful for very long-chain fatty acids that may not be readily processed by the usual mitochondrial pathway.

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What is the significance of hydrogen peroxide in peroxisomes?

Hydrogen peroxide, produced during peroxisome β-oxidation, plays a role in various cellular processes, including detoxification and signaling.

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How does ω-oxidation differ from the standard β-oxidation?

ω-oxidation, unlike standard β-oxidation, begins at the ω-end of the fatty acid, introducing a hydroxyl group and leading to the eventual formation of dicarboxylic acids.

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What is the main function of ω-oxidation?

ω-oxidation primarily functions to break down very long-chain fatty acids, particularly those that are not easily processed by the standard β-oxidation pathway.

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Acetyl-CoA to Fatty Acids

Acetyl-CoA can be converted into fatty acids for energy storage.

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Acetyl-CoA to Carbohydrates?

Acetyl-CoA cannot be directly converted into carbohydrates. This is why excess fat cannot be easily converted into glucose.

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Citrate Shuttle

A mechanism that transports acetyl-CoA from the mitochondria to the cytosol, where fatty acid synthesis occurs.

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Importance of NADH in Fatty Acid Synthesis

NADH is a reducing agent used in the biosynthesis of fatty acids.

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Fatty Acid Catabolism

The breakdown of fatty acids to produce energy. This occurs primarily in the mitochondria.

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Mitochondrial Transport of Acetyl-CoA

Acetyl-CoA is transported from the mitochondrion to the cytosol using the citrate shuttle.

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Role of Pyruvate Dehydrogenase (PDH)

PDH converts pyruvate (from glycolysis) into acetyl-CoA.

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Reductant Equivalents for Fatty Acid Synthesis

The synthesis of fatty acids requires reducing equivalents, which can be supplied by NADPH. NADPH is generated from NADH via transhydrogenases.

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Cantiporter

A transporter that moves substances in opposite directions across a membrane. Citrate/malate cantiporter moves citrate out of the mitochondria and malate into the mitochondria.

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Importance of Fatty Acid Synthesis

Fatty acid synthesis is crucial for building and storing energy, providing insulation, forming cell membranes, and producing hormones.

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Insulin's role

Insulin is released when blood glucose levels are high. It promotes glucose uptake by cells and stimulates glycogen synthesis, lowering blood glucose.

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Glucagon's role

Glucagon is released when blood glucose levels are low. It stimulates glycogen breakdown and gluconeogenesis, increasing blood glucose.

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Hormonal regulation of metabolism

Hormones like insulin and glucagon maintain blood glucose levels, ensuring that your body has enough energy.

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Epinephrine's role

Epinephrine (adrenaline) is released during stress, increasing blood glucose levels. It also diverts energy towards muscles, preparing them for 'fight or flight'.

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Hierarchical control

Hormonal regulation follows a hierarchy. The hypothalamus controls the pituitary gland, which then acts on other organs, ensuring coordinated responses.

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Pituitary gland's role

The pituitary gland is a secondary target for most hormones. It receives signals from the hypothalamus and then impacts other organs by releasing its own hormones.

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Adrenal medulla stimulation

Neural stimulation of the adrenal medulla releases epinephrine, which helps the body cope with stress.

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Fuel metabolism

Fuel metabolism refers to the processes that break down and use energy sources like carbohydrates, fats, and proteins to power the body.

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Glycogen Phosphorylase

An enzyme that breaks down glycogen by removing glucose units from the non-reducing ends of the glycogen chain. It uses phosphate to cleave the glycosidic bonds, producing glucose-1-phosphate.

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Glycogen Synthase

An enzyme that adds glucose units to the non-reducing ends of existing glycogen chains, building up the glycogen stores. It uses UDP-glucose as the glucose donor.

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Branching Enzymes

Enzymes that create branches in glycogen chains by transferring a segment of a straight chain to a nearby glucose unit, forming a new α-1,6 glycosidic linkage. They create multiple non-reducing ends, increasing the rate of glycogen breakdown.

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Debranching Enzymes

Enzymes that remove branches from glycogen chains by breaking α-1,6 glycosidic linkages, allowing for further breakdown of glycogen by glycogen phosphorylase.

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How do glycogen phosphorylase and glycogen synthase work together?

Glycogen phosphorylase breaks down glycogen into glucose units, while glycogen synthase builds up glycogen by adding glucose units. They regulate the amount of glycogen in the body depending on energy needs.

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Glycogen Metabolism

The process of breaking down (degradation) and building up (synthesis) glycogen, a branched glucose polymer that serves as the primary form of glucose storage in animals.

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Glycogen Degradation

The breakdown of glycogen into glucose molecules, primarily occurring in the liver and muscles, releasing glucose for energy production.

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Non-reducing Ends

The ends of a glycogen chain where glucose molecules can be added or removed.

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Branch Points

Points on a glycogen chain where new branches are created, increasing the number of non-reducing ends.

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Glucose-1-phosphate

The form of glucose that is released when glycogen is broken down.

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UDP-glucose

The form of glucose that is used to build glycogen.

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Glucose-6-Phosphate Dephosphorylation

Glucose-6-phosphate is converted back to glucose in the liver by removing the phosphate group. This allows glucose to be transported out of the liver and into the bloodstream.

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Glycogen Phosphorylase's Challenge

Glycogen phosphorylase needs to break down glycogen efficiently without wasting energy. It needs to use a phosphorolytic reaction instead of a hydrolytic reaction to save ATP.

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What does glycogen phosphorylase do?

Glycogen phosphorylase breaks down glycogen by cleaving off glucose units using phosphate instead of water. This saves energy and produces glucose-1-phosphate.

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What does glycogen synthase do?

Glycogen synthase builds up glycogen by adding glucose units to the ends of existing chains. It uses UDP-glucose as the glucose donor.

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Why is a phosphorolytic reaction important?

Phosphorolytic cleavage of glycogen conserves energy by directly producing glucose-1-phosphate. This saves the ATP required for phosphorylating free glucose.

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Allosteric Regulation

A type of regulation where a molecule binds to an enzyme at a site different from the active site, affecting the enzyme's activity.

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Phosphorylase a

The active form of glycogen phosphorylase, which is phosphorylated.

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Phosphorylase b

The inactive form of glycogen phosphorylase, which is dephosphorylated.

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How does glucose affect glycogen phosphorylase?

Glucose promotes dephosphorylation of glycogen phosphorylase a, converting it to the inactive form (phosphorylase b). This inhibits glycogen breakdown.

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Glycogenolysis

The breakdown of glycogen to release glucose, providing energy.

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What are the steps of glycogenolysis?

  1. Release of glucose-1-phosphate from glycogen. 2. Rearrangement of glycogen for continued breakdown. 3. Conversion of glucose-1-phosphate to glucose-6-phosphate for further metabolism.
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Phosphorolytic Cleavage

A reaction that involves the breaking of a bond by the addition of inorganic phosphate (Pi).

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α-1,6-Glucosidase

An enzyme that breaks down α(1,6) glycosidic bonds in glycogen, releasing glucose.

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What makes glycogen phosphorylase a 'good' enzyme?

Glycogen phosphorylase is a 'good' enzyme because it is regulated by allosteric effectors and phosphorylation, meaning it can be activated or inhibited depending on the body's needs, ensuring efficient glucose release.

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What is the role of pyridoxal phosphate (PLP) in glycogen phosphorylase?

Pyridoxal phosphate (PLP) is a cofactor for glycogen phosphorylase. It acts as a proton donor and acceptor during the catalytic process, enabling the enzyme to break down glycogen.

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What is the difference between glycogen phosphorylase and glycogen synthase?

Glycogen phosphorylase breaks down glycogen into glucose units, while glycogen synthase builds up glycogen from glucose units.

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Study Notes

Metabolism of Glycolipids, Isoprenoids, and Steroids

  • Topic: Lipid metabolism, specifically focusing on glycolipids, isoprenoids, and steroids.
  • Speaker: Dr. Ardina Grüber, Nanyang Technological University
  • Focus: Structures and classifications of various lipid classes.

Structure and Classification of Lipids

  • Simple Esters (RCOOR'): Includes substances like waxes.
  • Triacylglycerols (Neutral Fats): Triesters of glycerol.
  • Glycerophospholipids: Contain charged phosphate groups.
  • Sphingolipids: Derivatives of sphingosine (an amino alcohol).
    • Sphingomyelins: Contain charged phosphate groups.
    • Glycolipids: Contain sugar groups.
  • Steroids: Based on a 20-carbon acid.

Structure and Classification of Lipids Details

  • Glycerolipids:
    • Triacylglycerols: Storage forms of fatty acids. Examples include adipose stores and blood lipoproteins.
    • Glycerophospholipids: Crucial components of biological membranes.
      • Specific examples like phosphatidylcholine, phosphatidylethanolamine, phosphatidylserine, phosphatidylinositol bisphosphate (PIP2), phosphatidylglycerol, and cardiolipin are detailed.
  • Phospholipids: Another crucial class of biological membranes.
    • Ether glycerolipids: Have ether linkages
    • Plasmalogens: Special subtype of ether glycerolipids.
    • Platelet activating factor: Special lipid plays crucial role in blood clotting.
  • Sphingolipids:
    • Sphingophospholipids: Specific examples including sphingomyelin are discussed.
    • Glycolipids:
      • Cerebrosides.
      • Sulfatides.
      • Globosides.
      • Gangliosides.

Glycerolipids and Sphingolipids

  • Glycerolipids include triacylglycerols and glycerophospholipids.
  • Sphingolipids are crucial components of membranes and precursors of hormones.
  • Both are essential structural components of cell membranes.

Pathways in Glycerophospholipid Biosynthesis

  • The major phospholipids found in membranes are shown.
  • Pathways are found in both bacterial and eukaryotic cells.
  • Other reactions are confined to eukaryotic cells.
  • Key molecules include dihydroxyacetone phosphate (DHAP), diacylglycerol (DAG), and S-adenosylmethionine (AdoMet).

Glycerolipids Synthesis

  • Glycerolipids are synthesized by phosphorylation and acylation of glycerol.
  • Glycerokinase catalyzes phosphorylation of glycerol to form glycerol-3-phosphate.
  • Glycerol-3-phosphate is acylated at positions 1 and 2 to yield phosphatidic acid.

Dihydroxyacetone Phosphate

  • Dihydroxyacetone phosphate (DHAP) is a starting point for eukaryotic synthesis of phosphatidic acid.
  • It can be reduced to glycerol-3-phosphate by glycerol-3-phosphate dehydrogenase.

Diacylglycerol and CDP-diacylglycerol

  • Diacylglycerol and CDP-diacylglycerol are principal precursors of glycolipids in eukaryotes.
  • In eukaryotes, phosphatidic acid is converted either to diacylglycerol (DAG) or CDP-diacylglycerol.

Phosphatidic Acid Activated as CDP-diacylglycerol

  • The reaction of CTP with phosphatidic acid is catalyzed by CDP-diacylglycerol synthase.
  • This reaction is driven by the enzymatic hydrolysis of pyrophosphate, catalyzed by the ubiquitous pyrophosphatase.

Synthesis of Phospholipids via CDP-diacylglycerol

  • Eukaryotes use CDP-diacylglycerol as a precursor for several other phospholipids including phosphatidylinositol (PI), phosphatidylglycerol (PG), and cardiolipin.

Ceramide (Precursor of Sphingolipids)

  • Ceramide is a key precursor for sphingolipids.
  • The synthesis involves condensation of palmitoyl-CoA and serine followed by reduction with NADPH to yield sphinganine.

Formation of Squalene

  • The biosynthesis of squalene involves conversion of mevalonate to isopentenyl pyrophosphate(IPP) and dimethylallyl pyrophosphate (DMAPP)
  • IPP and DMAPP form geranyl pyrophosphate and then farnesyl pyrophosphate, which joins to yield squalene.

Cholesterol Synthesis from Squalene

  • Squalene monooxygenase converts squalene to squalene-2,3-epoxide.
  • 2,3-oxidosqualene lanosterol cyclase catalyzes the second reaction, which involves a succession of 1,2 shifts of hydride ions and methyl groups.
  • The synthesis leads to the formation of lanosterol, a precursor to cholesterol. Many steps are required to further convert lanosterol to cholesterol. All enzymes responsible for this are associated with the endoplasmic reticulum.

Cholesterol Fates

  • A portion of cholesterol produced in the liver is incorporated into hepatocyte membranes.
  • The majority of cholesterol is exported in three forms: biliary cholesterol, bile acids, and cholesteryl esters. Cholesterol is used in steroid hormone synthesis and as a precursor for vitamin D.

Bile Salt Synthesis

  • The formation of an α-hydroxyl group at position 7 of cholesterol is a rate-limiting step in bile salt synthesis and is inhibited by bile salts.
  • The process involves reduction, hydroxylation, and conversion of hydroxyls to α-hydroxyls.

HDL Fate

  • Nascent HDL is synthesized in the liver and intestinal cells.
  • HDL exchanges proteins with chylomicrons and VLDL.
  • HDL picks up cholesterol from cell membranes and converts it to cholesterol ester.

LDL Receptors in Cholesterol Uptake and Metabolism

  • LDL receptors recognize and take up LDL particles that have lipoprotein molecules.
  • Cholesterol ester droplets are produced.
  • Recycled vesicles return to the cell plasma membrane, releasing cholesterol, amino acids, and other materials.

Cholesterol Precursor of Steroid Hormones

  • Cholesterol is the precursor of steroid hormones.
  • The desmolase reaction converts cholesterol to pregnenolone, a key step in steroid synthesis.
  • Pregnenolone is transported to the endoplasmic reticulum where hydroxyl oxidation and migration to another ring position yield progesterone.

Regulation of Cholesterol Synthesis

  • Key regulatory steps include HMG-CoA reductaase and other steps.
  • Regulatory factors include insulin, glucagon, and intracellular cholesterol concentration.

Eicosanoids

  • Eicosanoids are locally acting signaling molecules derived from C20 fatty acids, primarily arachidonic acid.
  • They are short-lived hormones involved in various physiological functions.

Prostaglandins, Thromboxanes and Leukotrienes

  • Prostaglandins, thromboxanes, and leukotrienes are crucial eicosanoids derived from arachidonic acid. The enzyme that converts arachidonic acid is called prostaglandin H synthase (PGHS)
  • Aspirin inhibits an important step in their synthesis, providing anti-inflammatory effects.

Release of Arachidonic Acid by Phospholipid Hydrolysis

  • Release of arachidonic acid can result from hydrolysis of phospholipids, which involves activation of PLA2 and PLC.

Cyclooxygenation of Arachidonic Acid

  • All prostaglandins are cyclopentanoic acids derived from arachidonic acid.
  • Biosynthesis is initiated by the enzyme prostaglandin H synthase (PGHS), which plays dual roles (cyclooxygenase and peroxidase).

Conversion of Prostaglandin H2 by Different Synthases

  • Prostaglandin H2 is a precursor to various prostaglandins, thromboxanes, and prostacyclins.Different enzymes convert PGH2 to these molecules.

Inhibition of Prostaglandin Synthesis by Aspirin

  • Aspirin inhibits prostaglandin synthesis by acetylating a serine residue in the enzyme cyclooxygenase (COX).

Ring Identification System Used for Steroids

  • Steroids have a ring structure, derived from isoprene molecules, used in biological processes.

Cholesterol Biosynthesis

  • Cholesterol biosynthesis involves three main processes: conversion of C2 fragments to a C6 precursor, conversion of six C6 precursors to C30 squalene, and cyclization of squalene and transformation to C27 cholesterol. The different steps in the pathway are discussed.

Synthesis of Mevalonate

  • The cholesterol biosynthesis pathway begins in the cytosol with the synthesis of mevalonate from acetyl-CoA.
  • The rate-limiting step is catalyzed by HMG-CoA reductase.

Formation of Isopentenyl Pyrophosphate

  • Mevalonate is converted to isopentenyl pyrophosphate (IPP) and dimethylallyl pyrophosphate (DMAPP) as part of the cholesterol synthesis pathway.

Formation of Squalene

  • IPP and DMAPP condense to form geranyl pyrophosphate and then farnesyl pyrophosphate, then squalene, which is involved in cholesterol synthesis.

Cholesterol Synthesis from Squalene

  • The enzyme squalene monooxygenase converts squalene to squalene-2,3-epoxide, and then to lanosterol via 2,3-oxidosqualene lanosterol cyclase, and numerous steps following, which ultimately yields cholesterol.

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Description

Explore the fascinating world of lipid metabolism, focusing specifically on glycolipids, isoprenoids, and steroids. This quiz covers the structures and classifications of various lipid classes, including glycerophospholipids and triacylglycerols, providing a comprehensive overview for students of biochemistry.

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