Podcast
Questions and Answers
Which of the following is a primary disadvantage of using bacteria like E. coli for biopharmaceutical production of complex therapeutic proteins?
Which of the following is a primary disadvantage of using bacteria like E. coli for biopharmaceutical production of complex therapeutic proteins?
- The slow growth rate of bacteria makes it challenging to achieve high production yields within a reasonable timeframe.
- Bacteria often lack the ability to perform necessary post-translational modifications, such as glycosylation. (correct)
- The risk of contamination by animal viruses is significantly higher compared to mammalian cell lines.
- The laborious construction of over-expressing strains increases production time and costs.
What is a primary concern regarding the use of transgenic plants and animals in biopharmaceutical production?
What is a primary concern regarding the use of transgenic plants and animals in biopharmaceutical production?
- The potential contamination problems, particularly from animal viruses and prions. (correct)
- The difficulty in disrupting the cells to extract the desired product.
- The high costs associated with the media required for cell growth.
- The tendency of these systems to degrade foreign proteins.
What is the primary reason Chinese Hamster Ovary (CHO) cells are favored for producing human-compatible and bioactive recombinant proteins?
What is the primary reason Chinese Hamster Ovary (CHO) cells are favored for producing human-compatible and bioactive recombinant proteins?
- CHO cells have a significantly faster doubling time compared to other mammalian cells.
- CHO cells are less susceptible to contamination by human viruses compared to other cell lines.
- CHO cells facilitate glycosylation, which tailors proteins to be more human-like. (correct)
- CHO cells have simple media requirements, decreasing production costs.
What is a major obstacle when producing recombinant proteins in E. coli due to their rapid synthesis and accumulation?
What is a major obstacle when producing recombinant proteins in E. coli due to their rapid synthesis and accumulation?
Which of the following factors most significantly impacts the selection of a host cell for biopharmaceutical production?
Which of the following factors most significantly impacts the selection of a host cell for biopharmaceutical production?
In biopharmaceutical production, what is one of the challenges associated with using primary cell lines compared to transformed cell lines?
In biopharmaceutical production, what is one of the challenges associated with using primary cell lines compared to transformed cell lines?
A biopharmaceutical company aims to produce a complex recombinant protein that requires extensive glycosylation for its therapeutic activity. Which host cell line would be the MOST appropriate choice?
A biopharmaceutical company aims to produce a complex recombinant protein that requires extensive glycosylation for its therapeutic activity. Which host cell line would be the MOST appropriate choice?
Which factor poses the greatest challenge when using E. coli to produce a therapeutic protein intended for intravenous administration in humans?
Which factor poses the greatest challenge when using E. coli to produce a therapeutic protein intended for intravenous administration in humans?
A researcher is tasked with producing a large quantity of a relatively simple protein that does not require any post-translational modifications. Which expression system would likely be the MOST cost-effective and efficient choice?
A researcher is tasked with producing a large quantity of a relatively simple protein that does not require any post-translational modifications. Which expression system would likely be the MOST cost-effective and efficient choice?
Which characteristic of transformed mammalian cell lines, in contrast to primary cell lines, makes them better suited for long-term biopharmaceutical production, but also introduces a risk of variability?
Which characteristic of transformed mammalian cell lines, in contrast to primary cell lines, makes them better suited for long-term biopharmaceutical production, but also introduces a risk of variability?
What is the primary advantage of using suspension cell cultures in biopharmaceutical manufacturing compared to adherent cell cultures?
What is the primary advantage of using suspension cell cultures in biopharmaceutical manufacturing compared to adherent cell cultures?
Which of the following factors will make therapeutic proteins more effective?
Which of the following factors will make therapeutic proteins more effective?
What is the relationship between protein size and secretion needs in the selection of a host cell?
What is the relationship between protein size and secretion needs in the selection of a host cell?
Why is mammalian cell growth more complex than prokaryotic cell growth?
Why is mammalian cell growth more complex than prokaryotic cell growth?
What allows CHO cells to be easily manipulated?
What allows CHO cells to be easily manipulated?
How long is the doubling time of bacteria?
How long is the doubling time of bacteria?
How does protein degrade with yeast?
How does protein degrade with yeast?
Why is there in-vitro cell growth with transformed cell lines?
Why is there in-vitro cell growth with transformed cell lines?
Why can transformed cells handle subculturing for multiple generations?
Why can transformed cells handle subculturing for multiple generations?
Why are inclusion bodies a problem with bacteria?
Why are inclusion bodies a problem with bacteria?
What is a primary disadvantage of using bacteria like E. coli for biopharmaceutical production when the target protein requires glycosylation?
What is a primary disadvantage of using bacteria like E. coli for biopharmaceutical production when the target protein requires glycosylation?
Explain why inclusion bodies, a common occurrence in bacterial recombinant protein production, require extra processing steps.
Explain why inclusion bodies, a common occurrence in bacterial recombinant protein production, require extra processing steps.
Besides E. coli, what is another commonly used cell line for biopharmaceutical production, and what type of organism does it come from?
Besides E. coli, what is another commonly used cell line for biopharmaceutical production, and what type of organism does it come from?
What challenge related to media composition do scientists face when using mammalian cells in biopharmaceutical production, and why?
What challenge related to media composition do scientists face when using mammalian cells in biopharmaceutical production, and why?
Why might a biopharmaceutical manufacturer choose CHO cells over insect or plant cell systems for producing a therapeutic antibody intended for human use?
Why might a biopharmaceutical manufacturer choose CHO cells over insect or plant cell systems for producing a therapeutic antibody intended for human use?
Flashcards
Bacteria in Biopharmaceutical Production
Bacteria in Biopharmaceutical Production
Bacterial cells are used for biopharmaceutical production. Common strains are K12 and B strains.
Inclusion Bodies
Inclusion Bodies
Insufficient folding of complex proteins leading to the formation of insoluble aggregates in bacterial cells.
Endotoxins
Endotoxins
These are surface molecules on bacteria that can cause an immune response in humans.
Advantages of E. coli
Advantages of E. coli
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Disadvantages of E. coli
Disadvantages of E. coli
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Inclusion bodies in E. coli
Inclusion bodies in E. coli
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Primary Cell Cultures
Primary Cell Cultures
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Continuous Cell Lines
Continuous Cell Lines
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Mammalian Cell Cycle
Mammalian Cell Cycle
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Transformed Cell Lines Characteristics
Transformed Cell Lines Characteristics
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CHO Cells Advantages
CHO Cells Advantages
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Post-translational modifications in CHO
Post-translational modifications in CHO
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First Recombinant Protein
First Recombinant Protein
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Escherichia coli and Chinese hamster ovary
Escherichia coli and Chinese hamster ovary
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Choice of Host Cell Factors
Choice of Host Cell Factors
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Yeast cell modification differences
Yeast cell modification differences
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Insect & Mammalian Challenges
Insect & Mammalian Challenges
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Transgenic animals challenges
Transgenic animals challenges
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Study Notes
- Understanding host cells is crucial when synthesizing recombinant proteins for biopharmaceutical products.
Types of Host Cells Used in Biopharmaceutical Production
- Bacteria are simple to use but may result in insufficient folding of complex proteins and inclusion bodies.
- Bacteria lack post-translational modifications and may produce endotoxins.
- Yeast allows for post-translational modifications that differ from mammalian cells and can degrade proteins.
- Insect and mammalian cells require laborious construction of over-expressing strains and expensive media.
- Insect and mammalian cells have low growth rates and can be difficult to scale up.
- Transgenic plants and animals have long developmental cycles and are subject to contamination problems, including animal viruses and prions.
Choice of Host Cells
- The choice depends on the characteristics and properties of the protein of interest and how big it is.
- The amount of protein needed, whether it needs to be secreted extracellularly, and endotoxin presence must be considered.
- The need for post-translational modifications like glycosylation also influences the host cell type.
- Escherichia coli (E. coli) and Chinese hamster ovary (CHO) are the most commonly used.
- E. coli are prokaryotic cells, while CHO cells are eukaryotic cells.
Prokaryotic vs. Eukaryotic Systems
- Eukaryotic cells have a defined nucleus, organelles (rough ER, smooth ER, mitochondrion, Golgi apparatus, lysosome, etc), a cytoskeleton and ribosomes.
- Eukaryotic ribosomes are found in both free form in the cytoplasm and membrane-bound form in the rough ER.
- Prokaryotic cells do not have a nucleus, organelles, or a cytoskeleton.
Host Cells – Bacteria (E. coli)
- E. coli is a common microbial species used for biopharmaceutical production; K12 and B strains are commonly used strains.
- E. coli are Gram-negative bacteria.
- The first recombinant therapeutic protein produced in E. coli cells was insulin.
Advantages of E. coli
- The molecular biology of E. coli is well-characterized, which facilitates genetic manipulation.
- E. coli can give high expression levels of recombinant protein, up to 30% of total cellular protein.
- E. coli grows rapidly, with a doubling time of approximately 20 minutes, on simple and inexpensive media.
Disadvantages of E. coli
- Recombinant proteins accumulate intracellularly which requires additional processing steps to purify proteins from rest of host cell proteins.
- Proteins synthesized rapidly and in high levels may form insoluble aggregates called inclusion bodies.
- Isolated insoluble proteins need refolding to be active.
- E. coli lacks the ability to perform post-translational modifications, such as glycosylation.
- Lipopolysaccharides (LPS) are present on its surface, acting as pyrogens.
Problems with Inclusion Bodies
- Incorrectly folded recombinant protein accumulates as inclusion bodies in E. coli cells.
- Inclusion bodies have to be extracted from the cells and isolated and then have to be solubilized and denatured.
- Refolding of the protein takes place outside the cell with the addition of enzymes and factors.
- Correctly folded protein is then separated from incorrectly folded protein (which forms aggregates).
Host Cells – Mammalian Cells
- Primary cultures originate from normal animal tissues, but are maintainable in vitro for a limited number of generations of cultures.
- Primary cell types are suspension cells derived from blood and adherent cells (e.g., fibroblasts from connective tissues).
- Continuous cell lines are immortalized cell lines.
- Transformed cell lines are from human fibroblasts immortalized by simian virus 40 (SV40) infection.
- Continuous cells can be cultured for an infinite number of generations and may suffer phenotypic drift and lose in vivo characteristics after being subcultured.
- Examples of adherent cell lines include Vero (monkey kidney), stem cells, HeLa (cervical carcinoma), and CHO-K1 (Chinese hamster ovary).
- Examples of suspension cell lines are HEK293 (human embryonic kidney) cells and CHO-K1.
Mammalian Cell Growth Factors
- Doubling time is between 12 and 24 hours, depending on cell type, pH, temperature, gas supply, medium and routine maintenance.
- Mammalian cell division occurs via mitosis; the cycle consists of 4 phases.
- Primary cell lines are highly regulated and more complex when manipulating cell growth
- Transformed cell lines contain multiple mutations in genes that helps them regulate the cell cycle.
- Transformed cell lines are less dependent on growth factors, and in vitro cell growth occurs in less complex medium.
- Mammalian cells do not re-enter a cell cycle after completing one, it can remain in the pre-G1 phase
Chinese Hamster Ovary (CHO) Cells
- CHO cells are the preferred mammalian cell line for protein synthesis; they grow in suspension culture, are safe to use and less viruses grow in them.
- CHO cells grow in serum-free and chemically defined media, ensuring reproducibility between cell cultures.
- Glycosylation of glycoproteins produced by CHO cells are more bioactive and compatible in humans.
- Genetic engineering techniques can also manipulate a higher yield of proteins from CHO cells.
- The first recombinant therapeutic protein produced from a CHO cell was Tissue plasminogen activator (r-tPA).
- Today, approximately 70% of all recombinant protein therapeutics are produced using CHO cells.
Biopharmaceutical Production – Comparison between Expression Systems
- E. coli and yeast uses simple media types, insect cells are similar but mammalian cells require complex compounds.
- E. coli and yeast have higher level of expression than insect and mammalian cells.
- E. coli, yeast and insect cells all require hours, whereas mammalian cells require days or longer.
- E. coli has the shortest doubling time, whereas yeast has the longest.
- All of the expression systems show variable levels of protein proteolytic processing whereas glycosylation, fatty acid acylation, and amidation, sulfation and y-carboxylation is lacking in E. coli.
- E.Coli and Insect cells have a protein proteolytic processing of (+/-), both Yeast and Mammalian cells are (+) in comparision
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