Genetics Quiz on CRISPR and Restriction Enzymes
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Questions and Answers

Which statement about chromosome duplications is TRUE?

  • Chromosome duplications usually lead to a visible phenotype change.
  • Chromosome mutations in somatic cells are always passed to the offspring.
  • Gaining an extra sex chromosome is typically lethal.
  • Duplication of chromosome segments can result in the formation of pseudogenes. (correct)
  • Which of the following accurately describes single nucleotide polymorphisms (SNPs)?

  • Any two unrelated humans differ at many SNPs. (correct)
  • A haplotype consists of SNPs with only one allele present.
  • Most SNPs exhibit more than two alleles.
  • SNPs are evenly distributed every 100 base pairs in the genome.
  • What type of chromosome mutation results in a decrease of genetic material by one copy from each of two non-homologous chromosomes?

  • Double monosomy (correct)
  • Polysomy
  • Monosomy
  • Haploidy
  • Which statement about quantitative polymerase chain reaction (qPCR) is INCORRECT?

    <p>The lag phase is the period immediately after amplification starts.</p> Signup and view all the answers

    Which of the following is an effect of chromosome duplications?

    <p>They can lead to the formation of non-functional genes.</p> Signup and view all the answers

    Which statement about the acquisition stage of the original prokaryotic CRISPR-Cas system is true?

    <p>Foreign viral DNA becomes incorporated as a repeat in the CRISPR locus.</p> Signup and view all the answers

    Which of the following statements correctly describes the recognition sequence for EcoRI?

    <p>The recognition sequence is 5’G*AATTC3’ with cleavage at the indicated position.</p> Signup and view all the answers

    Which statement about gene duplication and neofunctionalization is accurate?

    <p>Neofunctionalization is a consequence of gene replication leading to distinct functions.</p> Signup and view all the answers

    What is a correct statement regarding next-generation sequencing techniques like Illumina?

    <p>It relies on fluorescently labeled reversibly cleavable terminators during DNA synthesis.</p> Signup and view all the answers

    Which option accurately describes reverse transcriptase's role in cDNA synthesis?

    <p>It forms a phosphodiester bond between nucleotides during elongation.</p> Signup and view all the answers

    Which statement about polyploidy is incorrect?

    <p>Triploids consistently produce viable gametes.</p> Signup and view all the answers

    Which statement regarding the causes of Down syndrome is false?

    <p>The majority of cases arise from nondisjunction in the father.</p> Signup and view all the answers

    What is a correct statement about chromosomal mutations?

    <p>Chromosomal mutations can lead to gene duplications and unbalanced gene expression.</p> Signup and view all the answers

    Chromosome duplications likely have a significant impact on phenotype due to the gain of extra genetic material.

    <p>False</p> Signup and view all the answers

    Single nucleotide polymorphisms (SNPs) commonly occur every hundred thousand base pairs in the human genome.

    <p>False</p> Signup and view all the answers

    Monosomy describes a condition where only one copy of a single chromosome is present in an organism's cells.

    <p>True</p> Signup and view all the answers

    The linear phase of qPCR cannot be used to infer template abundance because it is not stable over time.

    <p>True</p> Signup and view all the answers

    A dye that fluoresces less strongly when bound to double-stranded DNA is effective in tracking the growth of PCR product in qPCR.

    <p>False</p> Signup and view all the answers

    In the acquisition stage of the original prokaryotic CRISPR-Cas system, foreign viral DNA becomes incorporated as a repeat in the CRISPR locus.

    <p>True</p> Signup and view all the answers

    The sequence 5’CTGCAG3’ can be recognized by the restriction endonuclease EcoII.

    <p>False</p> Signup and view all the answers

    The recognition sequence for EcoRI includes the cleave site indicated by an asterisk.

    <p>True</p> Signup and view all the answers

    Neofunctionalization cannot occur following a gene duplication event.

    <p>False</p> Signup and view all the answers

    Next-generation sequencing techniques, such as Illumina, utilize reversible terminators during DNA synthesis.

    <p>True</p> Signup and view all the answers

    During cDNA synthesis, reverse transcriptase initiates DNA synthesis without needing a primer.

    <p>False</p> Signup and view all the answers

    Polyploidy is a phenomenon that occurs both in plants and animals.

    <p>False</p> Signup and view all the answers

    The most common cause of Down syndrome is a translocation of chromosome 21 that is inherited.

    <p>False</p> Signup and view all the answers

    Study Notes

    CRISPR-CAS System

    • In the acquisition stage of the original prokaryotic CRISPR-CAS system, foreign viral DNA is incorporated as a repeat in the CRISPR locus.
    • This statement is TRUE.

    Restriction Endonuclease Recognition

    • Could 5'CTGCAG3' be the recognition sequence for a restriction endonuclease?
    • This statement's answer is FALSE.

    EcoRI Restriction Enzyme

    • The recognition sequence for the Type II restriction endonuclease EcoRI is 5'G*AATTC3'.
      • The * indicates the location where the DNA sequence is cleaved by the enzyme.
    • The following DNA sequence is an example of a sequence cut by the enzyme:
      • 5′...G3′
      • 3'...СТТАA5′
    • This statement is TRUE.

    Neofunctionalization

    • Neofunctionalization can occur following a gene duplication event.
    • This statement is TRUE.

    Next-Generation Sequencing

    • Next-generation sequencing, like Illumina, determines DNA sequences by DNA synthesis involving fluorescently labeled non-reversible terminators.
    • This statement is TRUE.

    Reverse Transcriptase in cDNA Synthesis

    • During cDNA synthesis, reverse transcriptase performs specific actions.

      • It catalyzes the formation of phosphodiester bonds between the 5'-OH and the 3'-phosphate on adjacent nucleotides in the growing DNA polymer. This is the correct function of reverse transcriptase.
      • It does not synthesize a new DNA strand based directly on amino acid sequences.
      • It does not initiate DNA synthesis independently of a primer.
      • It creates a DNA copy of the RNA template and then replaces the RNA strand with a DNA version.
    • The correct answer is A

    Polyploidy

    • Polyploidy is a common phenomenon in plant species, but also occurs in animal species.
    • Hybrids of two species with the same number of chromosomes as their parents are fertile because the hybrids have the exact same number of chromosomes as their parent species.
    • Mitotic nondisjunction in somatic cells can lead to the production of a polyploid organism.
    • Polyploidy plays a major role in plant speciation
    • Triploids can be fertile, but not always because they don't always produce balanced gametes.

    Down Syndrome

    • Down syndrome can be caused by chromosomal translocations.
      • Down syndrome can be caused by aneuploidy. (an incorrect number of chromosomes)
    • The most typical cause of Down syndrome is a translocation of chromosome 21 that passes within families.
    • Older women are more inclined to give birth to children with Down syndrome.
      • The majority of Down syndrome occurrences stem from a nondisjunction event in the mother.
    • The incorrect statement is C.

    Chromosomal Mutations

    • Reciprocal translocation produces an unbalanced gene dosage.

    • Chromosome duplications typically have no effect on the phenotype as long as no genetic material is lost.

    • The gain of an extra sex chromosome is generally fatal.

    • Chromosome mutations arising in germline cells (sperm or egg-producing cells) will be passed on to the next generation.

    • Duplication of chromosome segments can result in pseudogenes, which are non-functional copies of genes.

    • The correct statement is E

    Single Nucleotide Polymorphisms (SNPs)

    • Any two unrelated humans typically differ at several thousand SNPs.

    • SNPs occur approximately every million base pairs.

    • While SNPs may theoretically have more than two alleles, most SNPs only have two.

    • Haplotypes are combinations of SNPs where only one copy of an allele for each SNP is present.

    • The correct statement is C

    Chromosome Mutation - Monosomy

    • Monosomy is a type of chromosomal mutation where an organism loses one copy of each of two non-homologous chromosomes.

    Quantitative Polymerase Chain Reaction (qPCR)

    • The number of cycles required for the PCR product to become detectable (Cq) provides a method for determining template abundance.

    • The linear phase of the reaction can be used to estimate template abundance.

    • A double-stranded DNA-binding dye that fluoresces can be utilized to monitor PCR product amplification.

    • The lag phase in qPCR refers to the time before any amplification occurs.

    • The incorrect statement is B.

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    Description

    Test your understanding of key concepts in genetics including the CRISPR-CAS system, restriction endonucleases, and next-generation sequencing. This quiz will challenge your knowledge on the mechanisms of gene manipulation and the functions of various enzymes involved in DNA processing.

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