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Questions and Answers
What is genetic engineering defined as?
What is genetic engineering defined as?
The direct manipulation of an organism's genes including heritable and non-heritable recombinant DNA constructs.
What do genes represent?
What do genes represent?
Segments of DNA that determine physical characteristics and provide instructions for cellular function.
DNA is a nucleic acid that plays a vital role in building and maintaining the human structure.
DNA is a nucleic acid that plays a vital role in building and maintaining the human structure.
True (A)
What is the definition of a tool or technique?
What is the definition of a tool or technique?
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Which of these is a product of genetic engineering?
Which of these is a product of genetic engineering?
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Which of these is a basic technique used in genetic engineering?
Which of these is a basic technique used in genetic engineering?
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What is the primary function of restriction enzymes in genetic engineering?
What is the primary function of restriction enzymes in genetic engineering?
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Restriction enzymes are more commonly found in eukaryotes than in prokaryotes.
Restriction enzymes are more commonly found in eukaryotes than in prokaryotes.
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What do restriction enzymes recognize?
What do restriction enzymes recognize?
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The process of gel electrophoresis separates DNA molecules based on their charge.
The process of gel electrophoresis separates DNA molecules based on their charge.
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What is a restriction map?
What is a restriction map?
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What is nucleic acid hybridization?
What is nucleic acid hybridization?
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What is a nucleic acid probe?
What is a nucleic acid probe?
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What is the difference between a Southern blot and a Northern blot?
What is the difference between a Southern blot and a Northern blot?
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What is molecular cloning?
What is molecular cloning?
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What are the three main steps of gene cloning?
What are the three main steps of gene cloning?
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DNA ligase is an enzyme that joins two DNA molecules.
DNA ligase is an enzyme that joins two DNA molecules.
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What is the purpose of a gene library?
What is the purpose of a gene library?
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Transformation is commonly used to introduce recombinant DNA into a host organism.
Transformation is commonly used to introduce recombinant DNA into a host organism.
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How do scientists detect the correct clone?
How do scientists detect the correct clone?
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What are conventional mutagens?
What are conventional mutagens?
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What is site-directed mutagenesis?
What is site-directed mutagenesis?
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Cassette mutagenesis involves replacing a DNA fragment with a synthetic DNA fragment.
Cassette mutagenesis involves replacing a DNA fragment with a synthetic DNA fragment.
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What is gene disruption?
What is gene disruption?
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Gene disruption can cause knockout mutations.
Gene disruption can cause knockout mutations.
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What are plasmids?
What are plasmids?
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Plasmids can be used as cloning vectors due to their small size, which makes isolating DNA easier.
Plasmids can be used as cloning vectors due to their small size, which makes isolating DNA easier.
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Plasmids have a single origin of replication, limiting the number of copies produced.
Plasmids have a single origin of replication, limiting the number of copies produced.
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What is the purpose of selectable markers in plasmids?
What is the purpose of selectable markers in plasmids?
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What are the two main methods for transferring vectors into bacterial cells?
What are the two main methods for transferring vectors into bacterial cells?
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In blue/white screening, what do blue colonies represent?
In blue/white screening, what do blue colonies represent?
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The lacZ gene is inactivated when foreign DNA is inserted into it, leading to insertional inactivation.
The lacZ gene is inactivated when foreign DNA is inserted into it, leading to insertional inactivation.
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Why does the blue color not develop in colonies where the lacZ gene has been inactivated due to foreign DNA insertion?
Why does the blue color not develop in colonies where the lacZ gene has been inactivated due to foreign DNA insertion?
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What are some characteristics of ideal hosts for cloning vectors?
What are some characteristics of ideal hosts for cloning vectors?
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Which of the following organisms are commonly employed as hosts for cloning vectors?
Which of the following organisms are commonly employed as hosts for cloning vectors?
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Bacillus subtilis is known for its ability to naturally secrete proteins.
Bacillus subtilis is known for its ability to naturally secrete proteins.
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What are reporter genes?
What are reporter genes?
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Which of these are examples of reporter genes?
Which of these are examples of reporter genes?
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What is the purpose of gene fusions in genetic engineering?
What is the purpose of gene fusions in genetic engineering?
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MRNA produced from cloned genes must be efficiently translated to produce functional proteins.
MRNA produced from cloned genes must be efficiently translated to produce functional proteins.
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What are some challenges associated with efficient translation of mRNA?
What are some challenges associated with efficient translation of mRNA?
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What is the purpose of expression vectors in genetic engineering?
What is the purpose of expression vectors in genetic engineering?
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Expression vectors are essential for efficient gene expression because they contain strong promoters that enhance the transcription of the cloned gene.
Expression vectors are essential for efficient gene expression because they contain strong promoters that enhance the transcription of the cloned gene.
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Effective transcription terminators prevent the expression of other genes on the plasmid, ensuring controlled gene expression.
Effective transcription terminators prevent the expression of other genes on the plasmid, ensuring controlled gene expression.
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Flashcards
Genetic Engineering
Genetic Engineering
Direct manipulation of an organism's genes, including heritable and non-heritable recombinant DNA constructs.
Genes
Genes
Segments of DNA that determine physical traits and provide instructions for cell function.
DNA
DNA
Nucleic acid that carries instructions for building and maintaining the body.
Restriction Enzyme
Restriction Enzyme
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Gel Electrophoresis
Gel Electrophoresis
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Nucleic Acid Hybridization
Nucleic Acid Hybridization
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Southern Blot
Southern Blot
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Molecular Cloning
Molecular Cloning
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Cloning Vector
Cloning Vector
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DNA Ligase
DNA Ligase
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Transformation
Transformation
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Gene Library
Gene Library
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Shotgun Cloning
Shotgun Cloning
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Site-Directed Mutagenesis
Site-Directed Mutagenesis
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Cassette Mutagenesis
Cassette Mutagenesis
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Knockout Mutations
Knockout Mutations
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Plasmid
Plasmid
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Blue/White Screening
Blue/White Screening
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Insertional Inactivation
Insertional Inactivation
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Expression Vectors
Expression Vectors
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GMO (Genetically Modified Organisms)
GMO (Genetically Modified Organisms)
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Prokaryotes
Prokaryotes
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Eukaryotes
Eukaryotes
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Modification Enzymes
Modification Enzymes
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Study Notes
Genetic Engineering Definition
- Genetic engineering is the direct manipulation of an organism's genes, including heritable and non-heritable recombinant DNA constructs.
Genes vs. DNA
- Genes are segments of DNA.
- DNA gives physical characteristics and carries instructions for cell function and growth.
- DNA is a nucleic acid responsible for building and maintaining human structure.
Tools/Techniques
- A tool or technique is a device or instrument used to carry out a specific function.
Products of Genetic Engineering
- Genetically Modified Organisms (GMO) crops include apples, mangoes, seedless grapes, canola oil, and corn oil.
Restriction and Modification Enzymes
- Genetic engineering uses in vitro techniques to alter genetic material.
- Basic techniques include restriction enzymes, gel electrophoresis, nucleic acid hybridization, nucleic acid probes, molecular cloning, and cloning vectors.
- Restriction enzymes recognize specific DNA sequences and cut DNA at those sites.
- These enzymes are widespread in prokaryotes, but rare in eukaryotes.
- Restriction enzymes protect prokaryotes from foreign DNA (like viruses).
- They are essential for in vitro DNA manipulation.
- Three classes of restriction enzymes: Type II cleave DNA within their recognition sequences.
- Restriction enzymes recognize inverted repeat sequences (palindromes).
- These sequences are typically 4-8 base pairs long; EcoRI recognizes a 6-base pair sequence.
- Restriction enzymes can create either sticky ends or blunt ends.
- Restriction enzymes protect cells from foreign DNA by destroying it.
- They also protect their own DNA from accidental destruction.
- Modification enzymes protect a cell's DNA for restriction enzymes by chemically modifying nucleotides in the restriction recognition sequence.
- Modification generally involves DNA methylation.
Gel Electrophoresis
- Gel electrophoresis separates DNA molecules based on size.
- Electrophoresis uses an electrical field to separate charged molecules.
- Gels are typically made of agarose, a polysaccharide.
- Nucleic acids migrate through the gel towards the positive electrode due to their negatively charged phosphate groups.
- Gels can be stained with ethidium bromide to visualize DNA under UV light.
Determining Fragment Size
- The same DNA cut with different restriction enzymes will have different banding patterns on an agarose gel.
- Fragment size can be determined by comparing to a standard.
- A restriction map is a map showing the location of restriction enzyme cuts on a DNA segment.
Nucleic Acid Hybridization
- Nucleic acid hybridization is the base pairing of single DNA or RNA strands from different sources to form a hybrid double helix.
- A segment of single-stranded DNA used in hybridization is called a nucleic acid probe.
- Southern blotting is a hybridization procedure where DNA is in the gel and the probe is either RNA or DNA.
- Northern blotting is a similar procedure where RNA is in the gel.
Molecular Cloning
- Molecular cloning is the process of isolating and incorporating a piece of DNA into a vector for replication and manipulation.
- Three main steps include:
- Isolation and fragmentation of source DNA.
- Insertion of DNA fragment into a cloning vector.
- Introduction of cloned DNA into a host organism.
Steps in Cloning
- Step 1: Source DNA is isolated and fragmented.
- This DNA can be genomic DNA, RNA, or amplified using PCR.
- Genomic DNA must first be restriction digested.
- Step 2: The DNA fragment is inserted into a cloning vector (often a plasmid or a virus).
- Most cloning vectors come from plasmids or viruses.
- DNA is usually inserted in vitro.
- DNA ligase joins the DNA molecules together (using sticky or blunt ends).
- Step 3: The recombinant vector (containing the cloned DNA) is introduced into a host organism.
- Transformation is often used to introduce recombinant DNA into the host.
- Some cells contain the desired cloned gene, while others have other genes.
- A gene library is a collection of cells with multiple genes.
- Shotgun cloning uses random genome fragments to create gene libraries.
Cloning Detection
- A common screening method detects correct clones using antibiotic resistance and plaque formation.
- These can be sufficient for cloning PCR-generated DNA sequences.
- A heterogeneous gene library might require more detailed analysis.
Molecular Mutagenesis
- Conventional mutagens produce random mutations.
- Site-directed mutagenesis performs mutations in vitro at a precise location.
- Used to study amino acid activity.
- Structural biologists greatly benefit from this tool.
- Cassette mutagenesis replaces DNA fragments with synthetic fragments causing, when inserted into gene sequences, "knockouts"; gene disruptions.
Plasmids as Cloning Vectors
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Plasmids are natural vectors with useful properties for cloning vectors.
- Small size for easy isolation.
- Independent replication origin.
- Multiple copies per cell.
- Selectable markers are present.
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Vector transfer is via chemical transformation or electroporation.
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Blue/white screening identifies clones with or without foreign DNA inserted (insertional inactivation) on vectors.
- Blue colonies don't have foreign DNA.
- White colonies have foreign DNA inserted.
Cloning Hosts
- Ideal hosts are quick-growing, inexpensive, non-pathogenic, and adept at DNA incorporation and replication.
- Hosts must also be genetically stable.
- Common hosts are Escherichia coli, Bacillus subtilis, and Saccharomyces cerevisiae.
Shuttle Vectors
- Shuttle vectors enable efficient eukaryotic mRNA translation and gene expression.
- Shuttle vectors solve problems by using promoters, terminators, and codon usage to express cloned genes with high levels of protein in various organisms.
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Description
Explore the fundamentals of genetic engineering, including the definition of genes and DNA, key tools and techniques, and products like GMOs. This quiz delves into the methods used in manipulating genetic materials and their implications in modern science.