Genetic Code and Translation: Chapter 15

Choose a study mode

Play Quiz
Study Flashcards
Spaced Repetition
Chat to Lesson

Podcast

Play an AI-generated podcast conversation about this lesson
Download our mobile app to listen on the go
Get App

Questions and Answers

What is the primary concept introduced by the 'one gene, one enzyme' hypothesis?

  • Genes are responsible for encoding proteins, with each gene encoding a separate enzyme. (correct)
  • Each gene functions by encoding multiple enzymes with overlapping functions.
  • Genes and enzymes are independently inherited and do not directly influence each other's function.
  • Enzymes can be encoded by multiple genes, allowing for redundancy in metabolic pathways.

In the context of the 'one gene, one polypeptide' hypothesis, which statement best describes the relationship between a gene and a polypeptide?

  • Multiple genes are required to synthesize a single polypeptide.
  • A single gene can encode multiple polypeptides through alternative splicing.
  • Each gene directs the synthesis of one specific polypeptide chain. (correct)
  • Polypeptides are synthesized independently of genes through non-coding DNA regions.

What is the primary utility of using Neurospora in Beadle and Tatum's experiments?

  • _Neurospora_'s rapid reproduction rate enabled quick observation of evolutionary changes.
  • _Neurospora_'s simple metabolic pathways allowed easy identification of which proteins were being produced
  • _Neurospora_'s resistance to radiation made it ideal for studying DNA repair mechanisms.
  • _Neurospora_'s complex life cycle facilitated the genetic analysis of nutritional mutations. (correct)

What is the key characteristic of auxotrophic mutants that makes them useful in genetic studies?

<p>Their inability to synthesize essential nutrients, requiring supplementation for growth. (D)</p> Signup and view all the answers

In a biochemical pathway, if a mutant strain can grow when supplemented with compound C but not with compound A or B, what can be inferred about the role of compound C?

<p>Compound C is produced from compound B, which is produced from compound A. (D)</p> Signup and view all the answers

What is the significance of the primary structure of a protein in determining its overall structure?

<p>The primary structure, composed of amino acid sequences, dictates the folding into secondary and tertiary structures. (B)</p> Signup and view all the answers

Which of the following is an accurate description of synonymous codons?

<p>Codons that specify the same amino acid, providing redundancy in the genetic code. (B)</p> Signup and view all the answers

What defines isoaccepting tRNAs?

<p>tRNAs that carry the same amino acid but have different anticodons. (D)</p> Signup and view all the answers

What is the role of the wobble hypothesis in genetic translation?

<p>It explains how a single tRNA anticodon can recognize multiple codons through relaxed base pairing at the third position. (D)</p> Signup and view all the answers

Which of the following codons typically serves as the initiation codon for protein synthesis?

<p>AUG (C)</p> Signup and view all the answers

Which event signals the termination of translation?

<p>A release factor binds to a stop codon in the A site of the ribosome. (A)</p> Signup and view all the answers

What is the role of aminoacyl-tRNA synthetases in protein synthesis?

<p>To ensure that the correct amino acid is attached to its corresponding tRNA. (C)</p> Signup and view all the answers

To which end of the tRNA molecule do amino acids attach?

<p>3' end (B)</p> Signup and view all the answers

What is the function of the Shine-Dalgarno sequence in bacterial mRNA?

<p>It serves as a ribosome-binding site on the mRNA. (C)</p> Signup and view all the answers

How does the Kozak sequence in eukaryotic mRNA influence translation?

<p>It helps position the ribosome at the start codon. (B)</p> Signup and view all the answers

During elongation, what is the role of the EF-Tu (elongation factor Tu) protein?

<p>It ensures correct codon-anticodon matching and delivers the charged tRNA to the A site of the ribosome. (C)</p> Signup and view all the answers

During translation elongation, which site on the ribosome does a tRNA molecule first bind to (excluding the initiator tRNA)?

<p>A site (C)</p> Signup and view all the answers

Elongation factor G (EF-G) facilitates which step in translation?

<p>Translocation of the ribosome along the mRNA (C)</p> Signup and view all the answers

During translation termination, what directly recognizes the stop codon?

<p>A release factor protein (C)</p> Signup and view all the answers

What is a polyribosome (or polysome)?

<p>A complex of multiple ribosomes translating the same mRNA molecule. (A)</p> Signup and view all the answers

What is a key function of tmRNA in bacteria?

<p>It allows stalled ribosomes to resume translation. (C)</p> Signup and view all the answers

What is the structural level most directly determined by the sequence of amino acids?

<p>Primary (C)</p> Signup and view all the answers

Which of the following is NOT a stop codon?

<p>AUG (D)</p> Signup and view all the answers

If a mutation occurs that alters the anticodon sequence of a tRNA, what is the most likely consequence?

<p>The tRNA will recognize a different codon, potentially inserting the wrong amino acid into the polypeptide. (B)</p> Signup and view all the answers

What part of the ribosome catalyzes the formation of peptide bonds between amino acids?

<p>The rRNA in the large ribosomal subunit (A)</p> Signup and view all the answers

What would likely happen if a cell's aminoacyl-tRNA synthetase for alanine (Ala) started attaching glycine (Gly) to the tRNAs that are supposed to carry alanine?

<p>Some alanine codons in mRNA would now be translated as glycine. (D)</p> Signup and view all the answers

A mutation in a bacterial cell results in a non-functional initiation factor 3 (IF3). What is the most likely consequence?

<p>The small and large ribosomal subunits will bind prematurely in the absence of mRNA (B)</p> Signup and view all the answers

Consider a eukaryotic mRNA that lacks a proper termination codon due to a mutation. What is the likely fate of the ribosome translating such mRNA?

<p>Translation will continue beyond the normal stop site until a cryptic stop codon is encountered, producing an elongated polypeptide. (C)</p> Signup and view all the answers

If the sequence of bases along an mRNA molecule is 5'-AUG-CCU-GAC-3', what sequence of tRNA anticodons would bind to it?

<p>3'-UAC-GGA-CUG-5' (C)</p> Signup and view all the answers

What would happen if a mutation caused a tRNA to lose its amino acid attachment site?

<p>That particular tRNA would still bind to its mRNA codon, but would not add an amino acid to the growing polypeptide. (D)</p> Signup and view all the answers

Which of the following components is NOT directly involved in the termination of translation?

<p>Aminoacyl-tRNA synthetase (D)</p> Signup and view all the answers

In eukaryotes, where does translation typically occur?

<p>Cytoplasm (C)</p> Signup and view all the answers

According to the wobble hypothesis, if a tRNA anticodon has the base inosine (I) at its 5' end, which mRNA codons can it recognize?

<p>Codons ending in A, U, or C (A)</p> Signup and view all the answers

What is the role of GTP (guanosine triphosphate) in translation?

<p>It provides the energy for various steps, such as initiation, elongation, and translocation. (D)</p> Signup and view all the answers

What prevents tRNAs from binding to the A site of the ribosome?

<p>Elongation Factors (A)</p> Signup and view all the answers

In Beadle and Tatum's experiments, how would a mutant that requires arginine for growth be classified based on its ability to grow on different supplemented media?

<p>It would grow when supplemented with either ornithine, citrulline, or arginine. (A)</p> Signup and view all the answers

How does the concept of 'one gene, one polypeptide' differ from the earlier 'one gene, one enzyme' hypothesis?

<p>It broadens the scope to include any protein, not just enzymes. (A)</p> Signup and view all the answers

In studying a metabolic pathway, you identify a mutant strain that can grow when supplemented with compound D, but not with compounds A, B, or C. Assuming D is the final product, what does this suggest about the metabolic block?

<p>The mutation affects the conversion of C to D. (D)</p> Signup and view all the answers

If a protein consists of multiple subunits, each encoded by a different gene, which level of protein structure describes the arrangement of these subunits?

<p>Quaternary structure (A)</p> Signup and view all the answers

Considering the structure of amino acids, what chemical linkage is responsible for creating the primary structure of a protein?

<p>Peptide bonds between the amino and carboxyl groups (D)</p> Signup and view all the answers

Which of the following is the most direct consequence of the degeneracy of the genetic code?

<p>Some mutations in the DNA sequence do not alter the amino acid sequence of the resulting protein. (A)</p> Signup and view all the answers

How do synonymous codons contribute to the efficiency and robustness of translation?

<p>By allowing cells to use different tRNAs for the same amino acid, based on tRNA availability. (B)</p> Signup and view all the answers

What is the functional significance of isoaccepting tRNAs in the process of translation?

<p>They provide an alternative means of incorporating the same amino acid into a protein. (A)</p> Signup and view all the answers

According to the wobble hypothesis, what is the minimum number of tRNAs theoretically required to recognize all codons for a specific amino acid that is specified by six different codons?

<p>3 (A)</p> Signup and view all the answers

How does the initiation codon, AUG, contribute to maintaining the correct reading frame during translation?

<p>It signals the ribosome to start translating at a specific point, establishing the proper sequence of codons. (D)</p> Signup and view all the answers

During translation, what would be the most immediate effect if a cell lacked release factors?

<p>The ribosome would stall indefinitely at a stop codon. (A)</p> Signup and view all the answers

What could be a consequence of a mutation that impairs the function of aminoacyl-tRNA synthetases?

<p>Incorrect amino acids would be attached to tRNAs. (B)</p> Signup and view all the answers

What determines the specificity of a tRNA molecule for a particular amino acid?

<p>The three-dimensional structure of the tRNA and its interaction with aminoacyl-tRNA synthetases. (D)</p> Signup and view all the answers

How does the Shine-Dalgarno sequence ensure the correct initiation of translation in bacteria?

<p>It base-pairs with a complementary sequence on the small ribosomal subunit. (C)</p> Signup and view all the answers

How would translation be affected in eukaryotic cells if the Kozak sequence were mutated such that it no longer effectively binds initiation factors?

<p>Translation initiation would be significantly reduced or abolished. (A)</p> Signup and view all the answers

What is the role of EF-Tu (elongation factor Tu) in the elongation phase of translation?

<p>It escorts the aminoacyl-tRNA to the A site of the ribosome. (D)</p> Signup and view all the answers

What event during translation elongation is facilitated by elongation factor G (EF-G)?

<p>Translocation of the ribosome along the mRNA (D)</p> Signup and view all the answers

During translation termination, what directly recognizes the stop codon in the mRNA sequence?

<p>A release factor (A)</p> Signup and view all the answers

What is the role of a polysome (or polyribosome) in protein synthesis?

<p>It allows simultaneous translation of a single mRNA by multiple ribosomes. (C)</p> Signup and view all the answers

What unique function does tmRNA perform when a bacterial ribosome stalls due to mRNA damage or a missing stop codon?

<p>It adds a specific tag to the incomplete polypeptide, marking it for degradation, and resumes translation to terminate the process. (A)</p> Signup and view all the answers

If the sequence of bases along an mRNA molecule is 5'-AUG-CCU-GAC-3', what amino acid sequence will be produced?

<p>Met-Pro-Asp (B)</p> Signup and view all the answers

If a tRNA normally carrying alanine (Ala) is mistakenly charged with glycine (Gly) by an altered aminoacyl-tRNA synthetase, what would be the most immediate consequence during translation?

<p>Glycine would be inserted into the protein where alanine should be. (A)</p> Signup and view all the answers

What is compromised by mutation of a bacterial cell that results in a non-functional initiation factor 3 (IF3)?

<p>The small ribosomal subunit will bind prematurely to the large subunit. (D)</p> Signup and view all the answers

What typically happens to a eukaryotic mRNA that lacks a proper termination codon due to a mutation?

<p>The ribosome continues translating past the normal stop site, until it reaches another stop codon. (C)</p> Signup and view all the answers

What is the likely effect if a mutation caused a tRNA to lose its amino acid attachment site?

<p>The tRNA will not be able to bind to the ribosome. (C)</p> Signup and view all the answers

What is the primary role of GTP (guanosine triphosphate) in the process of translation?

<p>It provides energy for various steps in translation, such as initiation, elongation, and translocation. (C)</p> Signup and view all the answers

In the experiment conducted by Nirenberg and Matthaei to decipher the genetic code, what was the significance of using homopolymers (e.g., poly-U) in a cell-free translation system?

<p>To identify which amino acid each codon specifies. (B)</p> Signup and view all the answers

What aspect of the tRNA structure is critical for proper function during translation?

<p>The specific three-dimensional folding of the tRNA, allowing recognition by the ribosome and aminoacyl-tRNA synthetases. (C)</p> Signup and view all the answers

During the initiation of translation in bacterial cells, the small ribosomal subunit initially binds to which specific region of the mRNA?

<p>The Shine-Dalgarno sequence (D)</p> Signup and view all the answers

What is the functional significance of the poly(A) tail present in eukaryotic mRNA during the initiation of translation?

<p>It enhances the stability of the mRNA and interacts with the 5' cap to promote ribosome binding. (C)</p> Signup and view all the answers

In a polyribosome complex, which of the following characteristics would typically be observed?

<p>All ribosomes are synthesizing protein, but the polypeptide chains become progressively longer as the ribosomes move toward the 3' end of the mRNA. (B)</p> Signup and view all the answers

How does the presence of a premature stop codon in an mRNA molecule typically affect translation and mRNA stability in eukaryotes?

<p>It triggers nonsense-mediated decay (NMD), reducing the amount of aberrant mRNA available for translation. (C)</p> Signup and view all the answers

What role do molecular chaperones play in post-translational modification of proteins?

<p>They assist in the proper folding of newly synthesized proteins. (D)</p> Signup and view all the answers

During translation what step is affected due to antibiotics?

<p>Translation is affected (B)</p> Signup and view all the answers

Flashcards

One gene, one enzyme

Genes function by encoding enzymes; each gene encodes a separate enzyme.

Auxotrophic mutation

A mutation where an organism requires a particular organic compound to grow.

Proteins

Polymers consisting of amino acids linked by peptide bonds.

Primary structure

The sequence of amino acids in a protein.

Signup and view all the flashcards

Secondary & tertiary structures

The way the primary structure folds to create structures like alpha helixes and beta sheets.

Signup and view all the flashcards

Quaternary structure

Two or more polypeptide chains associate.

Signup and view all the flashcards

Codon

A sequence of three nucleotides that encode an amino acid.

Signup and view all the flashcards

Nirenberg and Matthaei experiment

An experimental system used to determine which amino acids were specified by codons composed of only one type of base.

Signup and view all the flashcards

Nirenberg and Leder

Using ribosome-bound tRNAs to provide additional information about the genetic code.

Signup and view all the flashcards

Codon

A triplet RNA code that encodes for a specific amino acid.

Signup and view all the flashcards

Degenerate code

Synonymous codons: codons that specify the same amino acid.

Signup and view all the flashcards

Isoaccepting tRNAs

Different tRNAs that accept the same amino acid but have different anticodons.

Signup and view all the flashcards

Wobble hypothesis

The third base in a codon can sometimes form nonstandard base pairing with tRNA.

Signup and view all the flashcards

Reading frame

The three ways in which the sequence can be read in groups of three. Each different way of reading encodes a different amino acid sequence.

Signup and view all the flashcards

Shine-Dalgarno

mRNA attaches to the small subunit of the ribosome with the help of the sequence in bacteria.

Signup and view all the flashcards

Kozak sequence

The corresponding process in eukaryotic cells related to the Shine-Dalgarno sequence.

Signup and view all the flashcards

Aminoacyl-tRNA synthetases

Enzymes which attach amino acids to their corresponding tRNAs

Signup and view all the flashcards

Initiation factor 3

In bacteria, this binds to the 30S subunit and prevents association with 50S subunit.

Signup and view all the flashcards

Site E

The exit site; one of three sites of the ribosome.

Signup and view all the flashcards

Site P

The peptidyl site; one of three sites of the ribosome.

Signup and view all the flashcards

Site A

The aminoacyl site; one of three sites of the ribosome.

Signup and view all the flashcards

Elongation Factor G

Elongation factors that stimulates translocation of ribosome to next codon.

Signup and view all the flashcards

A polyribosome

A mRNA with several ribosomes attached

Signup and view all the flashcards

Messenger RNA surveillance

A system that detects and deals with errors in mRNA.

Signup and view all the flashcards

Nonsense-mediated mRNA decay

A method of eliminating mRNA containing premature termination codons.

Signup and view all the flashcards

Study Notes

  • Chapter 15 focuses on the genetic code and translation.

Many Genes Encode Proteins

  • Genes function by encoding enzymes.
  • Each gene encodes a separate enzyme, it could be described more specifically as a one gene, one polypeptide hypothesis.
  • Beadle and Tatum worked out the relation of genes to proteins using the fungus Neurospora, which has a complex life cycle.
  • Beadle and Tatum developed a method for isolating auxotrophic mutants in Neurospora.

Growth of Arginine Auxotrophic Mutants

  • Group I mutants can grow on minimal medium supplemented with ornithine, citrulline, or arginine, as the mutation blocks a step prior to the synthesis of all three.
  • Group II mutants grow on medium supplemented with either arginine or citrulline but not ornithine, as the mutation blocks a step prior to the synthesis of citrulline and arginine.
  • Group III mutants grow only on medium supplemented with arginine where the mutation blocks a step prior to the synthesis of arginine.
  • Each gene encodes a separate protein, this case is an enzyme.
  • B → A → C describes the order of A, B, C in a biochemical pathway.

Protein Structure and Function

  • Proteins are polymers consisting of amino acids linked by peptide bonds.
  • Amino acid sequence is the primary structure, which folds to create secondary and tertiary structures.
  • Two or more polypeptide chains associate to form the quaternary structure.
  • The primary structure primarily determines the secondary and tertiary structures of a protein.

The Genetic Code

  • Breaking the genetic code.
  • Degeneracy of the code.
  • Includes the reading frame and initiation codons.
  • Termination codons.
  • Also, the universality of the code.

Breaking the Genetic Code

  • Use of Homopolymers and Random copolymers to help break the code
  • Also, Ribosome-bound tRNAs helped break the code
  • Nirenberg and Matthaei developed a method for identifying the amino acid specified by a homopolymer.
  • A codon is three nucleotides that encode an amino acid.
  • Nirenberg and Leder used ribosome-bound tRNAs to provide additional information about the genetic code

RNA Genetic Code Summary

  • Codon: a triplet RNA code made from 64 possible codons.
  • 64 possible codons are made of 3 stop codons and 61 sense codons

Degeneracy of the Genetic RNA Code

  • Degenerate code: amino acid may be specified by more than one codon.
  • Synonymous codons: codons that specify the same amino acid
  • Isoaccepting tRNAs: different tRNAs that accept the same amino acid but have different anticodons.
  • Sense codons: encoding amino acid
  • Initiation codon: AUG
  • Termination codon: UAA, UAG, UGA
  • Wobble hypothesis
  • AUG is an initiation codon, UAA, UAG, and UGA are termination (stop) codons.
  • In the pairing of a codon and anticodon, wobble may exist if the mRNA and tRNA pair in an antiparallel fashion.
  • With wobble, a single anticodon can pair with more than one codon.

Reading Frame and Initiation Codon info

  • Reading frame: three ways in which the sequence can be read in groups of three, each different way of reading encodes a different amino acid sequence.
  • Nonoverlapping: A single nucleotide may not be included in more than one codon.
  • The universality of the code: near universal, with some exceptions.
  • The initiation codon in bacteria encodes N-formylmethionine; in eukaryotes, it encodes methionine.
  • Termination codons do not specify amino acids.
  • During the initiation of translation in bacteria, the small ribosomal subunit binds to the Shine-Delgarno sequence.

Translation of of Amino Acids

  • The binding of amino acids to transfer RNAs
  • The initiation of translation
  • Elongation and Termination
  • The translation of an mRNA molecule takes place on a ribosome.
  • N represents the amino end of the protein, while C represents the carboxyl end.

Amino Acid Binding

  • Aminoacyl-tRNA syntheses and tRNA charging are needed for binding
  • The specificity between an amino acid and its tRNA is determined by each individual aminoacyl-tRNA synthesis.
  • There are exactly 20 different aminoacyl-tRNA syntheses in a cell.
  • Amino acids attach to the 3' end of tRNAs.

tRNA specifics

  • Certain positions on tRNA molecules are recognized by the appropriate aminoacyl-tRNA synthetase.
  • An amino acid becomes attached to the appropriate tRNA in a two-step reaction.

Initiation of Translation

  • Initiation factors IF-3, initiator tRNA with N-formylmethionine attached to form fmet-tRNA, are needed for initiation
  • Energy molecule: GTP

Bacterial Vs Eukaryotic Cells In Initiation

  • The Shine-Dalgarno consensus sequence in bacterial cells is recognized by the small unit of the ribosome.
  • The Kozak sequence in eukaryotic cells facilitates the identification of the start codon.
  • The initiation of translation requires several initiation factors and GTP.
  • The Shine-Dalgarno consensus sequence in mRNA is required for the attachment of the small subunit of the ribosome.
  • The poly(A) tail of eukaryotic mRNA plays a role in the initiation of translation.

Elongation Steps

  • Exit site E
  • Peptidyl site P
  • Aminoacyl site A
  • Elongation factors: Tu, Ts, and G
  • Elongation of translation comprises three steps.
  • In elongation, the creation of peptide bonds between amino acids is catalyzed by rRNA.

Termination Stage

  • Translation ends when the ribosome reaches a termination codon.
  • Termination codons include UAA, UAG, and UGA.
  • Release factors bind to the termination codon, causing the release of:
    • The polypeptide from the last tRNA
    • The tRNA from the ribosome
    • The mRNA from the ribosome
  • Translation consists of tRNA charging, initiation, elongation, and termination.
  • Amino acids are linked in the order specified by mRNA to create a polypeptide chain.

Process of Translation

  • A number of initiation, elongation, and release factors take part in the process and energy supplied by ATP and GTP.
  • The components required for protein synthesis in bacterial cells differ for each stage
  • The universal genetic code has some exceptions

RNA and Ribisomes Affect Protein Synthesis

  • The three-dimensional structure of the ribosome.
  • Polyribosome: an mRNA with several ribosomes attached
  • In a polyribosome, the polypeptides associated with ribosomes will be the longest at the 3' end of mRNA.
  • Additional properties of RNA and ribosomes affect protein synthesis.
    • Messenger RNA surveillance -Posttranslational modifications of proteins
    • Translation and antibiotics -Nonstandard protein synthesis
  • The tmRNA in bacteria allows stalled ribosomes to resume translation.

Studying That Suits You

Use AI to generate personalized quizzes and flashcards to suit your learning preferences.

Quiz Team

Related Documents

More Like This

Translation
45 questions

Translation

BrightestOnyx318 avatar
BrightestOnyx318
Genetic Code and Translation Quiz
21 questions
Genetic Code and Translation Quiz
20 questions
Use Quizgecko on...
Browser
Browser