Podcast
Questions and Answers
What is the primary role of Coenzyme A (CoASH)?
What is the primary role of Coenzyme A (CoASH)?
- Carrying the acyl group of fatty acids (correct)
- Functioning as a coenzyme for vitamin C
- Serving as a reducing agent in oxidative phosphorylation
- Acting as a hydrogen donor in insulin regulation
Which vitamin acts as a coenzyme for the enzymes dopamine oxidase and polyphenol oxidase?
Which vitamin acts as a coenzyme for the enzymes dopamine oxidase and polyphenol oxidase?
- Vitamin B2 (Riboflavin)
- Vitamin B1 (Thiamin)
- Vitamin C (L-ascorbic acid) (correct)
- Vitamin B3 (Niacin)
Which compound is described as a hydrogen carrier in oxidative decarboxylation?
Which compound is described as a hydrogen carrier in oxidative decarboxylation?
- Biotin
- Pyridoxal phosphate
- Coenzyme Q (Ubiquinone)
- Lipoic acid (correct)
What function does Pyridoxal phosphate primarily serve?
What function does Pyridoxal phosphate primarily serve?
Which amino acid is part of the tripeptide known as Glutathion?
Which amino acid is part of the tripeptide known as Glutathion?
What is the primary role of enzymes in biological systems?
What is the primary role of enzymes in biological systems?
Which of the following describes a holoenzyme?
Which of the following describes a holoenzyme?
What is a common characteristic of ribozymes?
What is a common characteristic of ribozymes?
How is enzyme activity expressed in terms of International Units (IU)?
How is enzyme activity expressed in terms of International Units (IU)?
What distinguishes a coenzyme from a prosthetic group?
What distinguishes a coenzyme from a prosthetic group?
Where are intracellular enzymes primarily produced?
Where are intracellular enzymes primarily produced?
Which of the following best describes coenzymes?
Which of the following best describes coenzymes?
Which of the following enzymes is classified as an extracellular enzyme?
Which of the following enzymes is classified as an extracellular enzyme?
Which enzyme acts specifically on α (1,4) glycosidic bonds?
Which enzyme acts specifically on α (1,4) glycosidic bonds?
What term describes enzymes that are produced in an inactive form?
What term describes enzymes that are produced in an inactive form?
Which of the following methods can activate zymogens?
Which of the following methods can activate zymogens?
The enzyme L-amino acid oxidase is specific for which type of substrate?
The enzyme L-amino acid oxidase is specific for which type of substrate?
What type of enzymes catalyze the transfer of phosphate groups?
What type of enzymes catalyze the transfer of phosphate groups?
Which enzyme catalyzes both oxidation and decarboxylation reactions of citrate?
Which enzyme catalyzes both oxidation and decarboxylation reactions of citrate?
What is the primary role of oxidases in biochemical reactions?
What is the primary role of oxidases in biochemical reactions?
Which enzyme class is responsible for hydrolyzing glycosidic bonds?
Which enzyme class is responsible for hydrolyzing glycosidic bonds?
Which of the following enzymes is categorized as a peroxidase?
Which of the following enzymes is categorized as a peroxidase?
Which of the following statements is true for dehydrogenases?
Which of the following statements is true for dehydrogenases?
Which statement correctly describes optical specificity?
Which statement correctly describes optical specificity?
What function do lyases perform in biochemical reactions?
What function do lyases perform in biochemical reactions?
Which of the following enzymes is an example of a dioxygenase?
Which of the following enzymes is an example of a dioxygenase?
Which enzyme class includes enzymes that catalyze the interconversion of isomers?
Which enzyme class includes enzymes that catalyze the interconversion of isomers?
Which enzyme would hydrolyze the ester bond of triglycerides?
Which enzyme would hydrolyze the ester bond of triglycerides?
What type of reaction do oxidases participate in?
What type of reaction do oxidases participate in?
Which of the following substances is a non-specific irreversible inhibitor of enzymes?
Which of the following substances is a non-specific irreversible inhibitor of enzymes?
What effect does fluoride ion (F⁻) have on enzyme activity?
What effect does fluoride ion (F⁻) have on enzyme activity?
Which substance is known to react with the thiol (SH) group of enzymes leading to irreversible inhibition?
Which substance is known to react with the thiol (SH) group of enzymes leading to irreversible inhibition?
What is the role of antithrombin III in enzyme inhibition?
What is the role of antithrombin III in enzyme inhibition?
Which of the following can bind to Fe ions and inhibit cytochrome oxidase enzyme activity?
Which of the following can bind to Fe ions and inhibit cytochrome oxidase enzyme activity?
Which of the following substances is secreted to protect the stomach lining against pepsin?
Which of the following substances is secreted to protect the stomach lining against pepsin?
What type of agents are organo-phosphorus compounds like Malathion classified as?
What type of agents are organo-phosphorus compounds like Malathion classified as?
What is the primary reason why certain irreversible inhibitors cannot be reversed?
What is the primary reason why certain irreversible inhibitors cannot be reversed?
What is the role of inducers in enzyme synthesis?
What is the role of inducers in enzyme synthesis?
Which type of effector binds non-covalently at the allosteric site to stimulate catalytic reactions?
Which type of effector binds non-covalently at the allosteric site to stimulate catalytic reactions?
How does feedback inhibition affect enzyme activity?
How does feedback inhibition affect enzyme activity?
What happens to the kinetic curve in allosteric regulation compared to Michaelis-Menten kinetics?
What happens to the kinetic curve in allosteric regulation compared to Michaelis-Menten kinetics?
What effect does glucagon have on glycolytic enzyme synthesis?
What effect does glucagon have on glycolytic enzyme synthesis?
What is the mechanism of reversible covalent modification in enzyme regulation?
What is the mechanism of reversible covalent modification in enzyme regulation?
Which of the following accurately describes feedback regulation?
Which of the following accurately describes feedback regulation?
Which of the following statements is true about allosteric enzymes?
Which of the following statements is true about allosteric enzymes?
Flashcards
Enzymes
Enzymes
Biological catalysts that speed up chemical reactions by lowering activation energy.
What are enzymes made of?
What are enzymes made of?
Most enzymes are proteins, but some RNA molecules with catalytic activity are called ribozymes.
What is a substrate?
What is a substrate?
The substance that an enzyme acts upon in a chemical reaction.
What are intracellular enzymes?
What are intracellular enzymes?
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What are extracellular enzymes?
What are extracellular enzymes?
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What is an International Unit (IU)?
What is an International Unit (IU)?
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What is a Katal?
What is a Katal?
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What is a cofactor?
What is a cofactor?
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Glutathione
Glutathione
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Vitamin C (L-ascorbic acid)
Vitamin C (L-ascorbic acid)
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Coenzyme Q (Ubiquinone)
Coenzyme Q (Ubiquinone)
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Coenzyme A (CoASH)
Coenzyme A (CoASH)
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Pyridoxal phosphate (Co-transaminase)
Pyridoxal phosphate (Co-transaminase)
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Low Specificity Enzymes
Low Specificity Enzymes
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Optical Specificity Enzymes
Optical Specificity Enzymes
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Dual Specificity Enzymes
Dual Specificity Enzymes
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Zymogen (Proenzyme)
Zymogen (Proenzyme)
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Active Site Masking in Zymogens
Active Site Masking in Zymogens
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Oxidoreductases
Oxidoreductases
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Oxidases
Oxidases
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Dehydrogenases
Dehydrogenases
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Transferases
Transferases
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Hydrolases
Hydrolases
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Lyases
Lyases
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Isomerases
Isomerases
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Ligases (synthetases)
Ligases (synthetases)
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Aerobic oxidase
Aerobic oxidase
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Anaerobic oxidase
Anaerobic oxidase
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Allosteric site
Allosteric site
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Effector
Effector
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Feedback inhibition
Feedback inhibition
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Regulated enzyme
Regulated enzyme
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Phosphorylation
Phosphorylation
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Dephosphorylation
Dephosphorylation
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Enzyme synthesis regulation
Enzyme synthesis regulation
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Inducer
Inducer
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What is irreversible inhibition?
What is irreversible inhibition?
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Give examples of irreversible inhibitors
Give examples of irreversible inhibitors
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How do irreversible inhibitors work?
How do irreversible inhibitors work?
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How can irreversible inhibitors affect activators and coenzymes?
How can irreversible inhibitors affect activators and coenzymes?
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What are anti-enzymes?
What are anti-enzymes?
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How do cyanide, azide, and carbon monoxide act as irreversible inhibitors?
How do cyanide, azide, and carbon monoxide act as irreversible inhibitors?
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How does Isoniazid (INH) work as an irreversible inhibitor?
How does Isoniazid (INH) work as an irreversible inhibitor?
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What is the mechanism of action of EDTA?
What is the mechanism of action of EDTA?
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Study Notes
Enzymes
- Enzymes are protein catalysts, increasing the rate of biochemical reactions without being changed themselves.
- All enzymes are proteins, except some RNA molecules (ribozymes) which act as enzymes, typically catalyzing phosphodiester bond cleavage and synthesis.
- A substrate is the substance upon which an enzyme acts.
- Enzymes are categorized into intracellular and extracellular types.
- Intracellular enzymes work inside cells (e.g., metabolic enzymes).
- Extracellular enzymes are produced inside but act outside cells (e.g., digestive enzymes).
- Enzymes are primarily synthesized in the cytosol or ER, and some in the mitochondria.
- They are present in all body cells and fluids (plasma, CSF), and intracellular compartments.
Enzyme Activity Units
- International Unit (IU): Indicates the amount of enzyme catalyzing the conversion of one micromole of substrate to product per minute (1 IU = 1 µmol/min).
- Katal: Represents the amount of enzyme catalyzing the conversion of one mole of substrate to product per second (1 Katal = 1 mol/s).
Enzyme Nature
- Mostly protein-based.
- Can exist as simple enzymes (only protein) or holoenzymes (protein plus non-protein cofactor).
- Cofactors can be organic (vitamins) or inorganic (metal ions like Fe²⁺, Zn²⁺, Mg²⁺).
Prosthetic groups and Co-enzymes
- Prosthetic group: A small organic molecule covalently bonded to the apoenzyme (protein portion).
- Coenzyme: A small organic molecule non-covalently bonded to the apoenzyme. Often derived from vitamins and can accept or donate specific groups during a reaction.
Enzyme Specificity
- Absolute: One enzyme catalyzes only one substrate.
- Group: An enzyme catalyzes reactions involving specific functional groups.
- Stereo: One enzyme catalyzes reactions utilizing only one stereoisomer of a substrate.
- Dual: An enzyme catalyzes reactions on two substrates simultaneously.
Enzyme Classification
- Enzyme Commission (EC) numbers categorize enzymes based on the type of reaction they catalyze (e.g., oxidation-reduction, transfer).
- Each EC number has four parts identifying the reaction type, functional groups, coenzymes and substrate.
Enzyme Active Sites
- The active site of an enzyme is a specific region that binds the substrate.
- Complementary active site shape and functional groups allow binding of reactants to catalyze a reaction.
- Enzyme-substrate complex temporarily forms during catalysis within the active site where reactions occur and products are formed.
Catalytic Efficiency
- Enzymes dramatically increase reaction rates compared to non-enzymatic reactions (e.g., 10⁸ to 10¹⁰ times faster.)
- Usually, each enzyme molecule can convert 10⁰ to 10³ substrate molecules into product per second.
Enzyme Kinetics
- Kinetics studies the rates of enzyme-catalyzed reactions.
- Velocity (rate) is the increase in product or decrease in substrate concentration over time.
- Initial velocity (V₀) is measured at the beginning of the reaction when substrate concentration is high and product is low.
- The Michaelis-Menten equation describes the relationship between initial velocity (V₀), maximum velocity (Vₘₐₓ), and substrate concentration ([S]). This relates to enzyme affinity by substrate concentration [Km]. Km is a constant where V₀ is half Vₘₐₓ.
Enzyme Inhibition
- Inhibitors reduce enzyme activity.
- Competitive inhibition: Inhibitors compete with the substrate for the active site, reducing substrate binding.
- Non-competitive inhibition: Inhibitors bind to a different site, altering the enzyme's conformation and preventing the substrate from binding effectively, or affecting catalysis.
- Uncompetitive inhibition: Inhibitors bind specifically to a complex formed from enzyme and substrate thus slowing the reaction or preventing products from detaching from the active site.)
Enzyme Regulation
- Enzyme activity can be regulated by various factors:
- Concentration of an enzyme (synthesis and adaptation rates).
- Allosteric regulation, whereby an effector (molecule) binds to a site other than the active site, altering enzyme conformation, leading to an increase or decrease in enzyme activity.
- Positive allosteric effectors: Increase enzyme activity.
- Negative allosteric effectors: Decrease enzyme activity.
- Feedback inhibition: End products of a biosynthetic pathway inhibit an earlier enzyme in the pathway.
- Covalent modification (phosphorylation/dephosphorylation): Enzymes can be activated or deactivated by adding or removing phosphate groups.
Plasma Enzymes
- Plasma enzymes are categorized into functional and non-functional:
- Functional plasma enzymes are present in high concentrations and have roles in blood.
- Non-functional plasma enzymes are present in minor quantities and do not have roles in blood, but can be indicative of cellular damage. Examples include AST, ALT, ALP, and CPK.
Isoenzymes
- Isoenzymes are different forms of the same enzyme, differing in structure but having the same catalytic function.
- Isoenzymes exhibit varying levels across body tissues and are used in diagnostics of diseases (e.g., heart attack, liver disease).
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