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Questions and Answers

What is the total ATP yield from one molecule of glucose after the complete cellular respiration process?

  • About 18 or 20 ATP
  • About 30 or 32 ATP (correct)
  • About 24 or 26 ATP
  • About 20 or 22 ATP

Which stages of cellular respiration take place in the mitochondria?

  • Glycolysis and Pyruvate Oxidation
  • Pyruvate Oxidation and Oxidative Phosphorylation (correct)
  • Glycolysis and Citric Acid Cycle
  • Only the Citric Acid Cycle

Which of the following correctly describes the products of glycolysis?

  • 2 NADH and 4 ATP
  • 2 Pyruvate and 2 ATP (correct)
  • 1 Acetyl CoA and 2 NADH
  • 6 NADH and 2 ATP

What are the electron shuttles that carry electrons to the electron transport chain?

<p>NADH and FADH2 (A)</p> Signup and view all the answers

During which process is Acetyl CoA formed?

<p>Pyruvate Oxidation (C)</p> Signup and view all the answers

How many NADH are produced during the complete cycle of the Citric Acid Cycle?

<p>6 NADH (B)</p> Signup and view all the answers

What is the role of chemiosmosis in cellular respiration?

<p>To synthesize ATP using the proton gradient (C)</p> Signup and view all the answers

Which metabolic pathway does NOT occur in the cytosol?

<p>Electron Transport Chain (C)</p> Signup and view all the answers

What is the primary function of isocitrate lyase in the glyoxylate cycle?

<p>To cleave isocitrate into succinate and glyoxylate (C)</p> Signup and view all the answers

During the glyoxylate cycle, malate can be converted into which of the following?

<p>Fructose-6-P (A)</p> Signup and view all the answers

Why do plant seeds store fuel as lipids instead of carbohydrates?

<p>Lipids provide more energy due to higher calorie content (C)</p> Signup and view all the answers

What is the result of acetyl-CoA interacting with glyoxylate?

<p>Formation of malate (C)</p> Signup and view all the answers

What key role does sucrose play in plant seedlings?

<p>It provides chemical energy for initial growth (D)</p> Signup and view all the answers

What happens to succinate after it enters the mitochondrial matrix?

<p>It enters the TCA cycle to form malate (A)</p> Signup and view all the answers

What occurs immediately after glucose is transported into cells?

<p>It is phosphorylated by hexokinase (A)</p> Signup and view all the answers

What is one advantage of using lipids as an energy source over carbohydrates for seeds?

<p>Lipids have a higher caloric content per gram compared to carbohydrates (B)</p> Signup and view all the answers

What is the net reaction of gluconeogenesis?

<p>2 pyruvate + 2 NADH + 2 H+ + 4 ATP + 2 GTP + 6 H2O → glucose + 2 NAD+ + 4 ADP + 2 GDP + 6 Pi (D)</p> Signup and view all the answers

How many high-energy phosphate bonds must be hydrolyzed for gluconeogenesis to be thermodynamically favorable?

<p>Four (C)</p> Signup and view all the answers

What is the net free energy change for the conversion of pyruvate to glucose during gluconeogenesis?

<p>-37.7 KJ/mol (B)</p> Signup and view all the answers

Immediately after a meal, what is the primary source of blood glucose?

<p>Dietary carbohydrates (C)</p> Signup and view all the answers

Which molecule is NOT a substrate in the net reaction of gluconeogenesis?

<p>FADH2 (A)</p> Signup and view all the answers

What is the purpose of the carboxylation of pyruvate in gluconeogenesis?

<p>To convert pyruvate into oxalacetate (C)</p> Signup and view all the answers

What is the energy change ($ riangle G^O$') associated with the conversion of pyruvate to oxalacetate?

<p>$-2.1 ext{ KJ/mol}$ (B)</p> Signup and view all the answers

Which cofactor is employed in the pyruvate carboxylation process?

<p>Biotin (C)</p> Signup and view all the answers

Where does the conversion of pyruvate to oxalacetate take place?

<p>In the mitochondria (A)</p> Signup and view all the answers

What is the length of the arm formed by the biotin-lysine complex during carboxylation?

<p>14 Ã… (B)</p> Signup and view all the answers

What type of reaction is the conversion of pyruvate to oxalacetate considered to be?

<p>An anabolic reaction (D)</p> Signup and view all the answers

What role does ATP play in the mechanism of pyruvate carboxylase?

<p>It provides energy for carboxylation (A)</p> Signup and view all the answers

Which of the following statements about pyruvate carboxylase is incorrect?

<p>It functions in the cytoplasm (D)</p> Signup and view all the answers

What is the role of alanine aminotransferase in the conversion of alanine to pyruvate?

<p>It transfers the amino group of alanine to α-ketoglutarate. (D)</p> Signup and view all the answers

Which coenzyme is involved in the reaction where alanine is converted to pyruvate?

<p>Pyridoxal phosphate (D)</p> Signup and view all the answers

Which precursor is converted to dihydroxyacetone phosphate (DHAP)?

<p>Glycerol (C)</p> Signup and view all the answers

What type of process involves the conversion of lactate to pyruvate?

<p>Gluconeogenesis (B)</p> Signup and view all the answers

Which statement correctly describes gluconeogenesis?

<p>It generates glucose from non-carbohydrate sources. (B)</p> Signup and view all the answers

What does the catabolism of peptides and proteins provide for gluconeogenesis?

<p>Amino acids for conversion (B)</p> Signup and view all the answers

Which of the following is NOT a step in gluconeogenesis?

<p>Conversion of pyruvate to acetyl-CoA (B)</p> Signup and view all the answers

What separates gluconeogenesis from glycolysis in terms of reaction pathways?

<p>The utilization of different enzymes in specific steps (A)</p> Signup and view all the answers

What is the role of fructose-2,6-bisphosphatase in relation to biphosphatase activity?

<p>It inhibits biphosphatase activity. (B)</p> Signup and view all the answers

What is the phosphate source involved in the glucose-6-phosphatase reaction?

<p>Inorganic phosphate (B)</p> Signup and view all the answers

In what type of cells is glucose-6-phosphatase NOT present?

<p>Muscle cells (A)</p> Signup and view all the answers

Which component directly enables the cleavage of phosphate in the glucose-6-phosphatase reaction?

<p>Histidine (A)</p> Signup and view all the answers

What enhances the inhibition of biphosphatase by AMP?

<p>Fructose-2,6-bisphosphate (C)</p> Signup and view all the answers

What is the approximate ΔG value for the glucose-6-phosphatase reaction in the liver?

<p>-5.1 kJ/mol (C)</p> Signup and view all the answers

What is the role of the transport proteins T1, T2, and T3 in the glucose-6-phosphatase system?

<p>They are involved in substrate transport. (B)</p> Signup and view all the answers

Which compound inhibits both biphosphatase and fructose-2,6-bisphosphatase?

<p>AMP (C)</p> Signup and view all the answers

How many molecules of fructose-1,6-bisphosphate (FBP) are produced from 12 G3P?

<p>3 (C)</p> Signup and view all the answers

What additional molecule is used to regenerate ribulose-5-phosphate (RuBP) after utilizing fructose-1,6-bisphosphate (FBP)?

<p>Ribulose-5-phosphate (Ru5P) (A)</p> Signup and view all the answers

Which intermediate is in isomeric equilibrium with G3P?

<p>Dihydroxyacetone phosphate (DHAP) (A)</p> Signup and view all the answers

From the initial 12 G3P, how many molecules ultimately contribute to produce hexose compounds during glycolysis?

<p>6 (D)</p> Signup and view all the answers

Which of the following statements is correct about the molecules utilized in the conversion from FBP?

<p>2 FBPs and 6 Ru5P are involved (D)</p> Signup and view all the answers

What is the primary purpose of photosynthesis in ecosystems?

<p>To trap solar energy and convert it into free energy (C)</p> Signup and view all the answers

Which of the following is a consequence of light energy absorption by chlorophyll?

<p>ATP synthesis is driven by the absorbed light energy (D)</p> Signup and view all the answers

How is carbon dioxide utilized during the process of photosynthesis?

<p>It is transformed into organic molecules like carbohydrates (D)</p> Signup and view all the answers

What is the overall relationship between solar energy and biological reactions on Earth?

<p>Solar energy is converted into chemical energy, powering biological reactions (C)</p> Signup and view all the answers

Which statement correctly describes the role of photosystems in photosynthesis?

<p>Photosystems capture light energy and convert it to chemical forms (A)</p> Signup and view all the answers

What key processes are involved in the formation of carbohydrates during photosynthesis?

<p>Light-driven synthesis combined with carbon dioxide reduction (C)</p> Signup and view all the answers

How does photosynthesis impact carbon levels in the atmosphere annually?

<p>It significantly reduces carbon dioxide by converting it into carbohydrates (A)</p> Signup and view all the answers

What is a primary source of free energy necessary for biological reactions on Earth?

<p>Solar energy trapped through photosynthesis (C)</p> Signup and view all the answers

What are the products of the dark reactions of photosynthesis?

<p>C H2O, NADP+, and ADP (C)</p> Signup and view all the answers

In oxygenic photosynthesis, which reactant is oxidized?

<p>H2O (B)</p> Signup and view all the answers

How much free energy is required to reduce 1 mole of CO2 during photosynthesis?

<p>+480 kJ (D)</p> Signup and view all the answers

What type of organisms utilize H2S as a reductant in photosynthesis?

<p>Sulfur bacteria (C)</p> Signup and view all the answers

What is the overall equation for the process of photosynthesis?

<p>6 CO2 + 6 H2O → C6H12O6 + 6 O2 (B)</p> Signup and view all the answers

Which of the following best describes anoxygenic photosynthesis?

<p>It does not produce oxygen and uses compounds like H2S. (D)</p> Signup and view all the answers

What is the main source of energy for the light reactions of photosynthesis?

<p>Solar energy (C)</p> Signup and view all the answers

What do the ATP and NADPH generated in the light reactions primarily facilitate?

<p>The reduction of CO2 in the Calvin cycle (C)</p> Signup and view all the answers

What is the primary function of plastoquinone in photosystem II (PSII)?

<p>To shuttle electrons from PSII to the cytochrome b6f complex (D)</p> Signup and view all the answers

How does plastoquinone's structure contribute to its function?

<p>Its lipid nature allows for mobility within the membrane (B)</p> Signup and view all the answers

What is the reduced form of plastoquinone called?

<p>Plastoquinol (B)</p> Signup and view all the answers

What type of reaction occurs when plastoquinone is converted to its reduced form?

<p>Oxidation-reduction involving electron and proton uptake (A)</p> Signup and view all the answers

Which of the following best describes the structure of the cytochrome b6f complex?

<p>It is homologous to the cytochrome bc1 complex in mitochondria (B)</p> Signup and view all the answers

What is the role of the iron-sulfur clusters in the cytochrome b6f complex?

<p>To facilitate electron transfer (B)</p> Signup and view all the answers

What is one similarity between plastoquinone and coenzyme Q?

<p>Both are involved in oxidation-reduction processes (C)</p> Signup and view all the answers

Which component does the cytochrome b6f complex interact with to shuttle electrons?

<p>Plastocyanin (C)</p> Signup and view all the answers

What is the primary function of type I photosystems in photosynthesis?

<p>To provide reducing power in the form of NADPH (C)</p> Signup and view all the answers

What distinguishes the chlorophyll a dimers of PSI from those of PSII?

<p>Their maximum light absorption wavelength (B)</p> Signup and view all the answers

What is the role of PSII in the process of photosynthesis?

<p>To split water, producing oxygen (B)</p> Signup and view all the answers

Which term describes the arrangement of electron carriers between PSI and PSII based on standard reduction potential?

<p>Z scheme (A)</p> Signup and view all the answers

Which component acts as the terminal electron acceptor in type I photosystems?

<p>Ferredoxin (A)</p> Signup and view all the answers

What byproduct is produced by the splitting of water in PSII?

<p>Oxygen (C)</p> Signup and view all the answers

What is the main purpose of the electron transport chain in photosynthesis?

<p>To pump protons for ATP synthesis (B)</p> Signup and view all the answers

What is the significance of the 'zigzag' arrangement of electron carriers in the Z scheme?

<p>It indicates energy levels of electrons (B)</p> Signup and view all the answers

What is the role of the thylakoid membrane in photosynthesis?

<p>It contains the chlorophyll required for light absorption. (A), It is involved in transporting electrons between photosystems. (D)</p> Signup and view all the answers

Which molecule is produced as a byproduct during the process of splitting water in photosynthesis?

<p>O2 (C)</p> Signup and view all the answers

What is the significance of the proton motive force in the thylakoid membrane?

<p>It drives the production of ATP through ATP synthase. (C)</p> Signup and view all the answers

What type of energy transfer occurs in light-harvesting complexes of photosystems?

<p>Resonance energy transfer (C)</p> Signup and view all the answers

Which component of a photosystem is responsible for the primary electron acceptor?

<p>Reaction center complex (D)</p> Signup and view all the answers

How is NADPH generated in the photosynthetic process?

<p>Through reduction of NADP+ by electrons from Fd. (C)</p> Signup and view all the answers

What is the energy change that occurs when an electron in chlorophyll is excited?

<p>It jumps to a higher energy state. (C)</p> Signup and view all the answers

What happens to excited electrons in chlorophyll once they return to the ground state?

<p>They release energy in the form of heat or fluorescence. (D)</p> Signup and view all the answers

Which of the following statements best describes the role of chlorophyll a?

<p>It plays a crucial role in the reaction center electron transport. (D)</p> Signup and view all the answers

What component of photosynthesis is associated with creating a high concentration of H+ ions in the thylakoid space?

<p>Electrons transported across the thylakoid membrane (A), Splitting of water molecules (C)</p> Signup and view all the answers

What is the primary function of the Calvin Cycle in photosynthesis?

<p>To fix carbon dioxide into organic compounds. (D)</p> Signup and view all the answers

In the context of light absorption, what is resonance energy transfer?

<p>The transfer of excitation energy between pigment molecules. (A)</p> Signup and view all the answers

What is released during the electron transport process associated with photosystems?

<p>O2 and NADPH (A)</p> Signup and view all the answers

What is the main role of ATP synthase in the thylakoid membrane?

<p>To generate ATP using a proton gradient (D)</p> Signup and view all the answers

What happens to the electrons removed from glucose during its complete oxidation?

<p>They are transferred to coenzymes NAD+ and FAD. (A)</p> Signup and view all the answers

How is the free energy change ($ riangle G^O$') of the oxidation of glucose characterized?

<p>It is negative, suggesting a spontaneous reaction. (C)</p> Signup and view all the answers

What role do proton gradients play in ATP synthesis during cellular respiration?

<p>They provide energy for ATP synthesis via proton diffusion. (B)</p> Signup and view all the answers

In the electron transport chain, what is the final electron acceptor?

<p>Molecular oxygen (B)</p> Signup and view all the answers

Which of the following statements about the oxidation of glucose is incorrect?

<p>The complete oxidation occurs in a single step without intermediates. (C)</p> Signup and view all the answers

What is the primary role of the electron transport chain in cellular respiration?

<p>To transfer electrons to oxygen in small steps (C)</p> Signup and view all the answers

Which component of the electron transport chain accepts electrons as part of the process?

<p>Cyt a3 (D)</p> Signup and view all the answers

Which of the following statements accurately describes the energy role of the electron transport chain?

<p>It breaks energy release into smaller, manageable amounts. (C)</p> Signup and view all the answers

What is a key characteristic of the proteins involved in the electron transport chain, such as cytochromes?

<p>They all have iron atoms. (B)</p> Signup and view all the answers

Which outcome is NOT a direct function of the electron transport chain?

<p>Producing ATP through substrate-level phosphorylation (C)</p> Signup and view all the answers

What cofactor does complex I contain that is bound within its structure?

<p>FMN (A)</p> Signup and view all the answers

Which components are involved in the electron transfer pathway from NADH to coenzyme Q in complex I?

<p>FMN and iron-sulfur clusters (B)</p> Signup and view all the answers

How many iron-sulfur clusters are present in complex I?

<p>Eight (D)</p> Signup and view all the answers

What is the primary role of FMN in complex I?

<p>To facilitate electron transfer (B)</p> Signup and view all the answers

What is the directional flow of electrons within complex I?

<p>In a stepwise manner towards coenzyme Q (B)</p> Signup and view all the answers

Which of the following correctly describes the structural organization of mammalian complex I?

<p>It is split into a soluble region and a transport region (D)</p> Signup and view all the answers

What could be a consequence of malfunctioning iron-sulfur clusters in complex I?

<p>Reduced ATP synthesis capacity (B), Higher levels of reactive oxygen species (D)</p> Signup and view all the answers

Which molecule acts as the final electron acceptor from complex I?

<p>Coenzyme Q (CoQ) (D)</p> Signup and view all the answers

What is the primary function of Complex III in cellular respiration?

<p>To transfer electrons from CoQH2 to cytochrome c while pumping protons (C)</p> Signup and view all the answers

How many protons does Complex III pump into the intermembrane space for every two electrons transferred?

<p>Two protons (B)</p> Signup and view all the answers

Which of the following correctly describes the composition of mammalian Complex III?

<p>It functions as a dimer composed of 10 or 11 protein chains per monomer (D)</p> Signup and view all the answers

What is the molecular weight of mammalian Complex III?

<p>250 kDa (D)</p> Signup and view all the answers

What role does cytochrome c play in the process facilitated by Complex III?

<p>It acts as an electron acceptor (C)</p> Signup and view all the answers

Which statement about the electron transfer in Complex III is correct?

<p>Electrons are transferred from CoQH2 to cytochrome c (C)</p> Signup and view all the answers

During the Q Cycle, what is a significant outcome of the interaction between Complex III and CoQH2?

<p>It oxidizes CoQH2 and reduces cyt c (C)</p> Signup and view all the answers

What component of Complex III is primarily responsible for proton pumping?

<p>The protein chains forming the dimer (A)</p> Signup and view all the answers

What role does Coenzyme Q play in the electron transport chain?

<p>It collects electrons and transfers them to complex III. (B)</p> Signup and view all the answers

Which complexes transfer electrons to Coenzyme Q?

<p>Complex I and complex II (A)</p> Signup and view all the answers

What type of clusters are linked to Coenzyme Q?

<p>Iron-sulfur clusters (C)</p> Signup and view all the answers

What is a primary feature of complex II in the electron transport chain?

<p>It does not transport protons across the membrane. (B)</p> Signup and view all the answers

Which of the following best describes the function of iron-sulfur clusters in the electron transport chain?

<p>They facilitate electron transfer through redox reactions. (B)</p> Signup and view all the answers

What is the consequence of Coenzyme Q collecting electrons from different sources?

<p>It increases the energy potential available for ATP synthesis. (D)</p> Signup and view all the answers

What is the relationship between complex I and Coenzyme Q?

<p>Complex I transfers electrons to Coenzyme Q from NADH. (A)</p> Signup and view all the answers

How does Coenzyme Q interact with flavoproteins in the electron transport chain?

<p>It collects electrons and transfers them to complex III. (C)</p> Signup and view all the answers

What is the role of glycerol-3-phosphate dehydrogenase in the glycerophosphate shuttle?

<p>It catalyzes the oxidation of NADH. (B)</p> Signup and view all the answers

What determines the favorability of ATP transport via the ATP-ADP translocase?

<p>Membrane electrochemical potential. (B)</p> Signup and view all the answers

How many total protein components does the ATP-ADP translocase represent in the mitochondrial membrane?

<p>14% (B)</p> Signup and view all the answers

Which enzyme is responsible for the oxidation of glycerol-3-phosphate in the glycerophosphate shuttle?

<p>Flavoprotein dehydrogenase. (C)</p> Signup and view all the answers

What is the final step in the glycerophosphate shuttle?

<p>Reoxidation of FADH2 in the electron transport chain. (C)</p> Signup and view all the answers

What does cytosolic NADH convert into during the glycerophosphate shuttle?

<p>Glycerol-3-phosphate. (A)</p> Signup and view all the answers

What role does the ATP-ADP translocase serve in mitochondria?

<p>Mediating ATP and ADP movements. (C)</p> Signup and view all the answers

Which of the following pathways directly involves transport through the mitochondrial membrane?

<p>ATP-ADP transport. (C)</p> Signup and view all the answers

Flashcards

Glycolysis

The breakdown of glucose in the cytosol to produce pyruvate

Pyruvate Oxidation

Conversion of pyruvate to Acetyl CoA

Citric Acid Cycle

A cyclical series of reactions that utilizes Acetyl CoA to produce energy-carrying molecules

Oxidative Phosphorylation

The final stage of cellular respiration; generates the most ATP

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ATP Yield (Glycolysis)

2 ATP per glucose molecule

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ATP Yield (Oxidative Phosphorylation)

About 26-28 ATP per glucose molecule

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Electron Shuttles

Molecules that carry electrons between the cytosol and mitochondria

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TCA Cycle

Another name for the Citric Acid Cycle

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Gluconeogenesis Precursors

Substances used by the body to synthesize glucose when blood sugar is low.

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Lactate Conversion

Lactate is converted to pyruvate, a key precursor for gluconeogenesis.

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Alanine Conversion

Alanine is converted to pyruvate through a process involving aminotransferases and pyridoxal phosphate.

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Glycerol Conversion

Glycerol is converted to dihydroxyacetone phosphate (DHAP), a gluconeogenesis intermediate.

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Gluconeogenesis Pathway

A metabolic pathway that generates glucose from non-carbohydrate sources.

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Why Gluconeogenesis?

Gluconeogenesis is essential when blood sugar is low, allowing the body to maintain energy supply.

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Gluconeogenesis Requirements

Requires energy (ATP) and reducing equivalents (NADH) to convert precursors into glucose.

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Gluconeogenesis Location

Occurs primarily in the liver and kidneys.

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Glyoxylate Cycle

A metabolic pathway in plants that allows for the conversion of acetyl-CoA (from fatty acid breakdown) into carbohydrates, enabling growth in seedlings.

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Isocitrate Lyase

An enzyme in the glyoxylate cycle that cleaves isocitrate into succinate and glyoxylate.

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Malate Synthase

An enzyme in the glyoxylate cycle that condenses glyoxylate with acetyl-CoA to form malate.

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Why do plants store lipids in seeds?

Lipids serve as a lightweight and energy-dense fuel source for seedlings during germination, before photosynthesis kicks in.

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How does the glyoxylate cycle contribute to seedling growth?

It converts the energy from fatty acid breakdown (acetyl-CoA) into carbohydrates like sucrose, providing energy for initial growth.

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What is the key difference between lipids and carbohydrates in terms of energy storage?

Lipids store more energy per gram than carbohydrates, making them efficient energy reserves.

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What is the role of succinate in the glyoxylate cycle?

Succinate, produced by isocitrate lyase, enters the mitochondrial matrix and joins the TCA cycle, leading to the production of malate.

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What are the two possible fates of malate in the glyoxylate cycle?

Malate can either stay in the TCA cycle to generate energy or be converted to fructose-6-phosphate by gluconeogenesis in the cytosol, ultimately leading to sucrose synthesis.

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Pyruvate to Oxalacetate

The conversion of pyruvate to oxalacetate (OAA) is an important step in gluconeogenesis, the process of synthesizing glucose from non-carbohydrate sources.

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Pyruvate Carboxylase

Pyruvate carboxylase is an enzyme that catalyzes the conversion of pyruvate to oxalacetate. It requires ATP and biotin as a cofactor.

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Biotin's Role

Biotin, a vitamin, acts as a carrier of carbon dioxide (CO2) in the pyruvate carboxylase reaction. It is linked to the enzyme via a long arm-like structure.

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Gluconeogenesis Transport

Gluconeogenesis involves the transport of intermediates between different cellular compartments. Pyruvate, for example, is converted to oxalacetate in the mitochondria.

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Compartmentalization in Gluconeogenesis

Gluconeogenesis involves reactions occurring in different cellular compartments, such as the cytosol and mitochondria.

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Why is Pyruvate Carboxylation Compartmentalized?

Pyruvate carboxylation occurs in the mitochondria because it requires a specific set of enzymes and cofactors found in that location.

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Oxalacetate Transport

Oxalacetate, produced in the mitochondria during gluconeogenesis, must be transported to the cytosol for further reactions.

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Gluconeogenesis Energy Requirements

Gluconeogenesis is an energy-demanding process, requiring ATP and NADH to convert non-carbohydrate precursors into glucose.

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Gluconeogenesis

The metabolic pathway that synthesizes glucose from non-carbohydrate precursors, such as pyruvate, lactate, glycerol, and certain amino acids.

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Why is gluconeogenesis important?

Gluconeogenesis is crucial for maintaining blood glucose levels during fasting or prolonged exercise when glycogen stores are depleted. It ensures a constant supply of glucose for vital organs like the brain and red blood cells.

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What makes gluconeogenesis thermodynamically favorable?

Gluconeogenesis requires energy input, using 6 ATP and 2 GTP molecules to convert pyruvate to glucose. These energy investments make the reaction thermodynamically favorable, pushing the process forward.

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What are some important precursors for gluconeogenesis?

Pyruvate, lactate, glycerol, and certain amino acids are crucial precursors for gluconeogenesis. These molecules can be converted into intermediates of the pathway, eventually leading to glucose synthesis.

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Where does gluconeogenesis occur?

Gluconeogenesis mainly occurs in the liver and kidneys, although there are small amounts produced in other tissues like the intestines.

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Fructose-2,6-bisphosphate

A molecule that acts as a potent allosteric inhibitor of fructose-1,6-bisphosphatase, an enzyme involved in gluconeogenesis. It helps regulate glucose production by preventing the breakdown of fructose-1,6-bisphosphate.

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AMP's Role in Gluconeogenesis

AMP, a molecule indicating low energy levels, inhibits fructose-1,6-bisphosphatase, further lowering gluconeogenesis rates. This ensures glucose production only when energy stores are low.

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Citrate's Influence

Citrate, a signaling molecule from the citric acid cycle, stimulates fructose-1,6-bisphosphatase, indicating sufficient energy for gluconeogenesis.

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Glucose-6-Phosphatase: What is it?

An enzyme that catalyzes the irreversible conversion of glucose-6-phosphate to glucose, a crucial step in releasing glucose from the liver and kidneys.

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Glucose-6-Phosphatase: Where is it?

This enzyme primarily resides in the membranes of the endoplasmic reticulum (ER) within liver and kidney cells.

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Why No Gluconeogenesis in Muscle?

Muscle and brain lack glucose-6-phosphatase, meaning they cannot release glucose into the bloodstream. This limits their contribution to gluconeogenesis.

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Glucose-6-Phosphatase System

This system encompasses the phosphatase itself and three transport proteins (T1, T2, and T3) that facilitate the transport of glucose across cell membranes.

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ΔG of Glucose-6-Phosphatase

The standard free energy change (ΔG) for the glucose-6-phosphatase reaction in the liver is -5.1 kJ/mol, indicating an exergonic process that favors glucose release.

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Photosynthesis

The process by which plants and some other organisms use sunlight to synthesize foods with the help of chlorophyll.

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Chlorophyll

A green pigment found in plants and algae that absorbs light energy for photosynthesis.

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Photosystems I and II

Two groups of chlorophyll molecules that capture light energy and pass it on to other molecules in the photosynthesis process.

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Light-Dependent Reactions

The first stage of photosynthesis where light energy is captured and used to produce ATP and NADPH.

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Calvin Cycle

The second stage of photosynthesis, where carbon dioxide (CO2) is converted into sugar using energy from ATP and NADPH.

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ATP

Adenosine triphosphate; a molecule that serves as the primary energy currency for all cells.

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NADPH

Nicotinamide adenine dinucleotide phosphate; a molecule that carries electrons and is used as a reducing agent in photosynthesis.

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How is Carbon Dioxide used in Photosynthesis?

Carbon dioxide is fixed into organic molecules like glucose (a simple sugar) during the Calvin cycle.

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Photosystem I

A photosynthetic system that absorbs light maximally at 700nm, uses ferredoxin as the terminal electron acceptor, and produces NADPH by reducing power.

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Photosystem II

A photosynthetic system that absorbs light maximally at 680nm, uses quinones as the terminal electron acceptor, and splits water to produce oxygen and electrons.

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P700

The reaction center chlorophyll of Photosystem I, absorbing light at 700nm.

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P680

The reaction center chlorophyll of Photosystem II, absorbing light at 680nm.

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Z Scheme

The pathway of electron flow during noncyclic photosynthesis, resembling the letter 'Z' laid sideways, illustrating the energy cascade of electron transfer.

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Standard Reduction Potentials

The measure of a molecule's tendency to gain electrons, influencing its position in the Z scheme.

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Chemiosmotic ATP Synthesis

The process of ATP production driven by proton gradient across the thylakoid membrane, powered by electron transfer between PSII and PSI.

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Noncyclic Photosynthesis

The photosynthetic pathway where electrons flow from water to NADP+, producing both ATP and NADPH.

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Plastoquinone (PQ)

A mobile lipid-soluble molecule within the thylakoid membrane that shuttles electrons from Photosystem II (PSII) to the cytochrome b6f complex.

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Plastoquinol (PQH2)

The reduced form of plastoquinone, carrying two electrons and two protons.

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Why is plastoquinone important?

Plastoquinone plays a crucial role in the electron transport chain of photosynthesis, linking PSII to the cytochrome b6f complex and contributing to proton pumping for ATP synthesis.

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Cytochrome b6f Complex

A protein complex embedded in the thylakoid membrane that accepts electrons from plastoquinol and transfers them to plastocyanin.

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Plastocyanin (PC)

A small, water-soluble protein that carries electrons from the cytochrome b6f complex to Photosystem I (PSI).

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How does the cytochrome b6f complex contribute to ATP synthesis?

The electron transfer through the cytochrome b6f complex pumps protons across the thylakoid membrane, creating a proton gradient that drives ATP synthesis by ATP synthase.

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What is the relationship between plastoquinone and coenzyme Q?

Plastoquinone is an analog of coenzyme Q, the electron carrier in mitochondrial respiration. Both molecules have similar structures and functions.

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Why is the cytochrome b6f complex homologous to the cytochrome bc1 complex of mitochondria?

Both complexes share structural and functional similarities, suggesting evolutionary connections.

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G3P/DHAP Equilibrium

Glyceraldehyde 3-phosphate (G3P) and dihydroxyacetone phosphate (DHAP) are interconvertible, constantly shifting between these forms.

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G3P + DHAP: Interconvertible Stock

In glycolysis, 12 molecules of G3P and DHAP act as a single, interconvertible pool, allowing efficient use of both forms.

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FBP: Hexose Product

Six molecules of G3P are used to produce three molecules of fructose-1,6-bisphosphate (FBP), one of which continues in glycolysis, while the other two are used in regeneration.

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Ru5P Regeneration

Six remaining molecules of ribulose-5-phosphate (Ru5P) are phosphorylated to create the required six molecules of RuBP.

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Why this Cycle?

This cyclical process ensures a continuous supply of the 6-carbon sugar (FBP) required for glycolysis, while simultaneously regenerating the 5-carbon sugar (RuBP) needed for carbon fixation.

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Light Harvesting Complexes

Antenna-like structures surrounding the reaction center complex in a photosystem, capturing light and funneling it to the reaction center.

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Reaction Center Complex

The core of a photosystem where light energy is converted into chemical energy.

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Primary Electron Acceptor

A molecule in the reaction center complex that receives excited electrons from chlorophyll.

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Thylakoid Membrane

The membrane within a chloroplast that contains photosystems and is the site of light-dependent reactions in photosynthesis.

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Thylakoid Space

The space inside the thylakoid membrane, where protons are concentrated during photosynthesis.

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Electron Transport Chain

The series of molecules embedded in the thylakoid membrane through which electrons flow, releasing energy used to power the production of ATP.

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Proton Motive Force

The potential energy stored in the concentration gradient of protons across the thylakoid membrane, used to generate ATP.

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ATP Synthase

An enzyme embedded in the thylakoid membrane that uses the proton motive force to synthesize ATP.

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Stroma

The fluid within the chloroplast, outside the thylakoid membrane, where the Calvin Cycle reactions take place.

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Photosynthesis Reaction

The overall process of photosynthesis where carbon dioxide and water are converted into glucose and oxygen using light energy.

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Oxygenic Photosynthesis

Photosynthesis where water is used as the electron donor, producing oxygen as a byproduct.

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Anoxygenic Photosynthesis

Photosynthesis where a substance other than water, like hydrogen sulfide, is used as the electron donor. Oxygen is not produced.

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Standard ΔG of Glucose Oxidation

The standard free energy change for oxidizing glucose to carbon dioxide and water is -2870 kJ/mol. The reverse reaction, the reduction of CO2 to glucose, requires this much energy.

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Light Reactions

The initial stage of photosynthesis where light energy is captured and used to produce ATP and NADPH.

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Dark Reactions (Calvin Cycle)

The second stage of photosynthesis where carbon dioxide is converted into glucose using the energy from ATP and NADPH.

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Reduction Potential

A measure of a molecule's tendency to gain electrons in a redox reaction. It indicates how easily a molecule can be reduced.

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Cytosolic NADH Entry

The process of transferring electrons from NADH in the cytosol into the mitochondrial electron-transport chain.

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Proton Gradient

The difference in proton concentration across a membrane, creating a potential energy that drives ATP synthesis.

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Electron Transport Chain (ETC)

A series of proteins embedded in the mitochondrial membrane that transfer electrons from NADH and FADH2 to oxygen, releasing energy to power ATP synthesis.

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Cytochromes

Iron-containing proteins in the ETC that play a crucial role in electron transfer. Each cytochrome has a heme group containing an iron atom that accepts and releases electrons.

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Chemiosmotic Coupling

The linkage between electron transport and ATP synthesis, where the energy released during electron transfer drives the pumping of protons across the mitochondrial membrane, creating a gradient that powers ATP production.

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Complex II

A protein complex in the electron transport chain that directly oxidizes succinate to fumarate, generating FADH2.

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Coenzyme Q (Ubiquinone)

A lipid-soluble electron carrier that collects electrons from Complex I, II, and other flavoproteins, transferring them to Complex III.

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Iron-sulfur Clusters

Non-heme groups in Complex II that contain iron and sulfur atoms, playing a crucial role in electron transfer.

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Complex IV

The final complex in the electron transport chain that accepts electrons from cytochrome c and transfers them to oxygen, generating water.

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Coenzyme Q (CoQ)

Also known as ubiquinone, a mobile electron carrier in the mitochondrial electron transport chain. It accepts electrons from complex I (and complex II) and delivers them to complex III.

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Structure of Complex I

Complex I has a 'L-shape' structure. It consists of a soluble region and a membrane region.

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Electron Transport

The movement of electrons through a series of protein complexes in the mitochondrial membrane, releasing energy used for ATP synthesis.

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Redox Potential

The tendency of a molecule to gain or lose electrons. Molecules with higher redox potentials are more likely to accept electrons.

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CoQH2

The reduced form of coenzyme Q, a lipid-soluble molecule that acts as an electron carrier in the electron transport chain, transporting electrons from Complex I and II to Complex III.

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Proton Pumping

The process by which Complex III actively moves protons (H+) from the mitochondrial matrix to the intermembrane space. This creates an electrochemical gradient that drives ATP synthesis.

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Intermembrane Space (IMS)

The region between the inner and outer mitochondrial membranes. It plays a critical role in oxidative phosphorylation, as the proton gradient builds up in this space.

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Glycerol-3-Phosphate Shuttle

A pathway that carries electrons from cytosolic NADH to the mitochondrial electron-transport chain, using glycerol-3-phosphate as an intermediate.

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FADH2 in the Glycerol-3-Phosphate Shuttle

FADH2, reduced from FAD in the second step of the shuttle, donates its electrons directly to the electron-transport chain, bypassing complex I.

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ATP-ADP Translocase

A protein in the mitochondrial membrane that facilitates the exchange of ATP and ADP between the mitochondrial matrix and the intermembrane space.

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Membrane Potential's Role in ATP-ADP Transport

The electrochemical potential across the mitochondrial membrane favors the outward transport of ATP and inward transport of ADP.

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Where is ATP-ADP Translocase located?

The ATP-ADP translocase is embedded in the inner mitochondrial membrane, linking the matrix and intermembrane space.

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Why is ATP-ADP Translocase important?

It ensures a constant supply of ATP to the cytosol and a steady stream of ADP to the matrix, supporting cellular energy needs.

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Why is FADH2 less efficient?

FADH2 enters the ETC at a later stage than NADH, contributing less to the proton gradient and therefore less ATP production.

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What is the importance of the Glycerol-3-Phosphate Shuttle?

It allows the transfer of reducing equivalents from the cytosol to the mitochondria, enabling NADH generated in glycolysis to contribute to ATP production.

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Study Notes

Carbohydrate Metabolism Pathways

  • Glucose 6-phosphate is the starting point for several pathways including glycolysis, the pentose phosphate pathway, and glycogen synthesis.
  • Oxidative reactions involve the conversion of 3 glucose 6-phosphate molecules to 6 NADPH and 3 CO2.
  • This also leads to 3 molecules of ribulose 5-phosphate.
  • Ribulose-5-phosphate further converts into xylulose 5-phosphate, ribose 5-phosphate, and sedoheptulose 7-phosphate.
  • Non-oxidative reactions interconvert pentose sugars to yield glycolysis intermediates.
  • The pathways intertwine and share intermediates, enabling flexibility in metabolism.

ATP Yield per Glucose

  • Glycolysis yields 2 ATP per glucose molecule.
  • Pyruvate oxidation yields 2 ATP per glucose molecule.
  • Citric acid cycle yields 2 ATP, 6 NADH, and 2 FADH2 per glucose molecule.
  • Oxidative phosphorylation produces an additional 26-28 ATP, resulting in a maximum yield of 30-32 ATP per glucose.

Fate of Carbon in TCA Cycle

  • Acetyl-CoA enters the TCA cycle, and carbons are released as CO2.
  • The oxidation-reduction enzymes and coenzymes involved are shown in magenta, while the entry of acetyl-CoA into the TCA cycle is indicated by a green box.
  • CO2 release is illustrated using yellow boxes.

Glyoxylate Cycle

  • The glyoxylate cycle is an anabolic variant of the citric acid cycle.
  • It bypasses the TCA cycle's decarboxylation steps, producing oxaloacetate with a net production of four-carbon dicarboxyl acids.
  • It is crucial in plants for converting fatty acids to carbohydrates (fats to sugars), and in plant seeds.
  • Glyoxysomes contain the enzymes needed for this conversion. This cycle is important during seed germination when plants use stored lipids (fats) for energy, before photosynthesis becomes active.

Relationship between the Glyoxylate and TCA Cycles

  • Intermediates pass between the glyoxysomes and mitochondria, allowing interplay between the two cycles.
  • The glyoxylate cycle converts two acetyl-CoA to succinate in glyoxysomes which in turn can convert to oxaloacetate in mitochondria.
  • This is important in gluconeogenesis.

Overview of Carbohydrate Metabolism

  • Glucose is phosphorylated by hexokinase to glucose-6-phosphate (G6P) inside cells.
  • G6P can enter glycolysis, the pentose phosphate pathway, and glycogen synthesis.
  • Fructose and galactose are converted into intermediates of glucose metabolism.
  • The phosphate group in G6P is completely ionized at physiological pH, giving it an overall negative charge, making it impermeable to the plasma membrane.
  • Glucose-6-phosphate is a substrate for both the pentose phosphate pathway and glycolysis.
  • The pathway involves oxidative reactions, generating NADPH and ribose-5-phosphate.
  • NADPH is required for fatty acid synthesis and other biosynthetic processes.
  • Ribose-5-phosphate is needed for nucleotide synthesis.

The Pentose Phosphate Pathway

  • The pathway has two phases: oxidative and non-oxidative.
  • Oxidative phase produces NADPH, and CO2
  • Non-oxidative phase interconverts sugars of different lengths.
  • Important enzymes include transketolase and transaldolase.

Conversion of Pyruvate to Oxaloacetate

  • Pyruvate carboxylase catalyzes the conversion of pyruvate to oxaloacetate.
  • The reaction requires biotin as a cofactor and ATP as energy.

Gluconeogenesis

  • Gluconeogenesis is the synthesis of glucose from non-carbohydrate sources.
  • The major precursors are lactate, amino acids, and glycerol.
  • The majority of gluconeogenesis occurs in the liver.

Coupling ATP and GTP Hydrolysis in Gluconeogenesis

  • In gluconeogenesis, energy is required, which is provided by the hydrolysis of ATP and GTP.
  • The net reaction to produce glucose from two pyruvate molecules requires 4 ATP and 2 GTP molecules.

Regulation of Glycolysis and Gluconeogenesis

  • Key regulators of glycolysis and gluconeogenesis include fructose-2,6-bisphosphate, AMP, ATP, citrate, and acetyl-CoA.
  • These molecules regulate enzyme activity through allosteric interactions.
  • The regulation ensures that glycolysis and gluconeogenesis are not operating simultaneously to a great extent

Sources of Blood Glucose

  • The primary sources of blood glucose are:
    • Dietary carbohydrates immediately after a meal
    • Glycogenolysis during the fasting period.
    • Gluconeogenesis during prolonged fasting or starvation.

Quiz Questions

  • Isocitrate lyase and malate synthase are the two enzymes enabling plants to metabolize acetate. They are located in the glycosomes.
  • Gluconeogenesis is not merely the reversal of glycolysis because glycolysis is exergonic, and gluconeogenesis would be an endergonic process not able to proceed without supplementary energy input.
  • Biotin is the prosthetic group of pyruvate carboxylase.
  • The amino acid residue involved in the glucose-6-phosphatase reaction is phosphohistidine.
  • Important regulators of gluconeogenesis are acetyl-CoA and fructose-2,6-bisphosphate.
  • The two phases of the pentose phosphate pathway are oxidative and non-oxidative. The two primary products are NADPH and ribose-5-phosphate.
  • The prosthetic group of transketolases in the non-oxidative phase of the pentose phosphate pathway is thiamine pyrophosphate (TPP).

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Description

Explore the intricate pathways of carbohydrate metabolism including glycolysis, the pentose phosphate pathway, and more. This quiz covers the key processes involved in ATP production and the fate of carbon in the TCA cycle. Test your understanding of these essential biochemical pathways.

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