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Questions and Answers
What happens to the red blood cells (RBCs) during the centrifugation process?
What happens to the red blood cells (RBCs) during the centrifugation process?
What is the normal total protein content of plasma?
What is the normal total protein content of plasma?
In which condition is the albumin:globulin (A/G) ratio typically inverted?
In which condition is the albumin:globulin (A/G) ratio typically inverted?
Which component remains suspended between plasma and red blood cells after centrifugation?
Which component remains suspended between plasma and red blood cells after centrifugation?
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How is serum obtained from whole blood?
How is serum obtained from whole blood?
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What does the appearance of a deep yellow color in urine indicate?
What does the appearance of a deep yellow color in urine indicate?
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What is the result of the phosphate test when the yellow Canarian color appears?
What is the result of the phosphate test when the yellow Canarian color appears?
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Which test indicates the presence of urobilinogen in urine?
Which test indicates the presence of urobilinogen in urine?
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What is the primary function of glutamine in relation to ammonia?
What is the primary function of glutamine in relation to ammonia?
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What does a white milky color in the urine mean after conducting the calcium test?
What does a white milky color in the urine mean after conducting the calcium test?
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Under which conditions is ammonia excretion likely to increase?
Under which conditions is ammonia excretion likely to increase?
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What does it mean if the sulfur powder remains on the surface during the Hay sulfur test?
What does it mean if the sulfur powder remains on the surface during the Hay sulfur test?
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What characterizes hyperuricemia in the context of gout?
What characterizes hyperuricemia in the context of gout?
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What is a common cause of gout related to uric acid?
What is a common cause of gout related to uric acid?
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Which factor contributes to the deposition of sodium urate crystals in joints?
Which factor contributes to the deposition of sodium urate crystals in joints?
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What is the normal serum uric acid range for males?
What is the normal serum uric acid range for males?
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What process primarily results in the production of uric acid?
What process primarily results in the production of uric acid?
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What happens to uric acid excretion in metabolic gout?
What happens to uric acid excretion in metabolic gout?
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What is an indicator of protein presence in urine when using the Nitric Acid Test?
What is an indicator of protein presence in urine when using the Nitric Acid Test?
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Which test involves the use of copper sulfate to detect protein in urine?
Which test involves the use of copper sulfate to detect protein in urine?
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What is the normal range of urine urea excretion per day?
What is the normal range of urine urea excretion per day?
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What is the purpose of a 24-hour urine collection?
What is the purpose of a 24-hour urine collection?
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Which of the following statements is true regarding the urine dipstick test?
Which of the following statements is true regarding the urine dipstick test?
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Which of the following conditions can lead to increased urinary urea excretion?
Which of the following conditions can lead to increased urinary urea excretion?
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What indicates the presence of urea in urine during the diacetyl monoxime test?
What indicates the presence of urea in urine during the diacetyl monoxime test?
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In performing a sulphosalicylic acid test, what observation indicates the presence of protein?
In performing a sulphosalicylic acid test, what observation indicates the presence of protein?
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What is the main toxic effect of ammonia in the blood?
What is the main toxic effect of ammonia in the blood?
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What is a key consideration when collecting urine for protein/creatinine ratio measurement?
What is a key consideration when collecting urine for protein/creatinine ratio measurement?
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Which enzyme is primarily responsible for the formation of ammonia from glutamine in the kidneys?
Which enzyme is primarily responsible for the formation of ammonia from glutamine in the kidneys?
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What is the initial step in the 24-hour urine collection process?
What is the initial step in the 24-hour urine collection process?
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What is the recommended storage temperature for a 24-hour urine collection?
What is the recommended storage temperature for a 24-hour urine collection?
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What is one of the primary fates of ammonia produced in the peripheral tissues?
What is one of the primary fates of ammonia produced in the peripheral tissues?
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How are traces of ammonia typically present in the blood?
How are traces of ammonia typically present in the blood?
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Which metabolic processes contribute to ammonia production in the body?
Which metabolic processes contribute to ammonia production in the body?
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What is the primary function of detergent in the DNA extraction process?
What is the primary function of detergent in the DNA extraction process?
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Which barrier is specific to plant cells that must be overcome in DNA extraction?
Which barrier is specific to plant cells that must be overcome in DNA extraction?
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What role does ice cold alcohol play in the DNA extraction process?
What role does ice cold alcohol play in the DNA extraction process?
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Why is salt used in the DNA extraction buffer?
Why is salt used in the DNA extraction buffer?
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What is the function of EDTA in the extraction buffer?
What is the function of EDTA in the extraction buffer?
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During the filtration step of the DNA extraction process, what is the purpose of using nylon gauze?
During the filtration step of the DNA extraction process, what is the purpose of using nylon gauze?
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What is the initial step in the DNA extraction protocol?
What is the initial step in the DNA extraction protocol?
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Why is it important to pour alcohol slowly down the side of the test tube?
Why is it important to pour alcohol slowly down the side of the test tube?
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Study Notes
Practical Biochemistry Study Notes
- Course Name: Practical Biochemistry
- University: Minia University
- Faculty: Medicine
- Department: Biochemistry
- Year: First year
- Academic Year: 2024-2025
Lab Safety
- Essential Practices: Practice proper lab attire (lab coat, gloves, protective goggles, IDs), identify warning signs, understand hazard material procedures, and know how centrifuges work.
- Safe Working: Lab is a serious work environment, careless behavior is not tolerated. Safe working protects the user, other lab workers, cleaners, visitors, and the workspace.
- Safety Rules: Adhere to lab coat, book placement, and lab manual use regulations. Listen carefully to instructions and stand properly during lab sessions. Read experiment instructions beforehand.
- General Work Procedure: During lab work, ask questions, wear safety eyewear, and gloves when handling blood specimens. Avoid broken glassware and inspect glassware for cracks. Use flames cautiously and avoid carrying hot or dangerous equipment and chemicals unsupervised. Never taste or handle chemicals with your bare hands; keep lids on bottles and inform instructor about any issues.
Laboratory Instruments and Apparatuses
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Volume Measurement: Instruments for volume measurements depend on the instrument's size—a smaller diameter generally means more accurate measurement.
- Graduated Cylinders: Used to measure various liquid volumes.
- Syringes: Used for precise liquid transfer.
- Burets: Instruments with stopcocks for precise liquid control.
- Pipettes: Used to accurately measure and deliver specific portions of liquids (1mL-10mL). Automatic pipettes are most accurate (1µL-1000µL).
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Chemical Handling:
- Test Tubes: Holding/processing liquid samples for various lab procedures (heating, dissolving, centrifugation).
- Bottles/Containers: For storage of various chemicals and reagents. Use informative labels.
- Pipette Pump: Used for glassware delivery without mouth suction.
- Spatulas: Used for handling solid powdered chemicals.
- Test Tube Racks: Hold/organize test tubes on a lab bench. Plastic racks may melt if heated excessively.
- Test Tube Holders: Used when handling hot/unsafely handled test tubes.
Blood & Plasma & Serum
- Blood: Red-colored fluid, composed of blood cells suspended in blood plasma.
- Plasma: Straw-colored liquid component of blood containing proteins, glucose, clotting factors, minerals, and waste.
- Serum: Plasma without fibrinogen and other clotting factors.
- Plasma Components: Water (91%), Inorganic components (Na, K, Ca, Mg, Cl, HCO3, HPO4), Organic components (plasma proteins 6-8%, hormones [cortisol, thyroxine], vitamins, lipids, blood gases (O2 and CO2), other metabolites [glucose, amino acids, urea, uric acid]).
- Cellular Components: Blood cells (RBCs, WBCs, and platelets) comprise 40-45% of total blood volume.
Methods of Separation of Plasma and Serum
- Mixing blood with anticoagulants (heparin, oxalate, EDTA) prevents clotting. Thoroughly mix.
- Centrifuge the mixture, (2000-2500 rpm for 5-10 min).
- Separate the supernatant fluid (plasma) or serum (plasma without clotting factors).
Protein concentration in different body fluid
- Normal plasma protein content: 6-8 g/100 mL.
- Key protein components: Albumin (3.5-5 g/dL), Globulins (2.5-3.5 g/dL), and Fibrinogen (200-400 mg/dL).
- Most plasma proteins are synthesized in the liver (except immunoglobulins).
- Albumin:globulin ratio (A/G ratio) is usually between 1.2:1 or 1.5:1.
CSF (Cerebrospinal Fluid)
- Normal CSF protein levels: 15-45 mg/dL.
- Infants have higher CSF protein levels than adults.
- CSF protein concentration falls rapidly from birth to six months.
Urine Analysis
- Volume: Normal adult urine volume: 1-1.8 liters/24 hours. Ratio of night-to-day urine production is usually 1:2 or 1:3.
- Color: Normal urine color: from pale yellow to deep yellow, depending on concentration.
- Odor: Normal odor is slightly aromatic, but in standing urine, the typical odor is ammonical.
- Reaction (pH): Normal urine pH is slightly acidic (around 6.8).
- Specific Gravity: Adult values 1.001-1.025, newborn typically 1.015-1.018. A higher value typically denotes a higher concentration of solutes in the urine.
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Physical Properties:
- Appearance (Crystal Formation, Pus, Blood Cells, Bacteria, and Fatty substances).
Chemical Examination of Urine
- Reducing Sugars: Test positive for reducing sugars like glucose, galactose, or fructose, using Benedict's test.
- Ketone Bodies: Detection of ketone bodies using Rothera test.
- Urinary Proteins: Test for presence of urinary proteins, such as albumin, globulin, or other using heat coagulation test.
- Urea: Detect Urea utilizing the diacetyl monoxime test.
- Phosphate: presence of phosphate using ammonium molybdate test.
- Calcium: Presence/absence of calcium with ammonium oxalate test.
- Bile Salts: Test for presence of bile salts using the Hay sulfur test.
Clinical Enzymology
- Enzyme Definition: Biological catalysts accelerating reaction rates and often specific to tissues.
- Serum Enzymes: Enzymes in blood; some are essential (clotting) and others are present but not active in blood.
- Clinical Application: Measurement of tissue-specific enzyme levels can indicate injury, death, or tissue problems in organs.
DNA Extraction
- Definition: Removing DNA from cells.
- Sources: Any living tissue (plants, animals).
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DNA Extraction Procedure:
- Crushing /Lyse: Break open cells to release DNA.
- Extraction Buffer: Dissolve membranes, proteins, and stabilizes DNA.
- Ice-Cold Alcohol: Precipitates DNA.
- DNA Extraction Protocol: outlines detailed steps and components, and lab equipment to conduct procedure.
PCR (Polymerase Chain Reaction)
- Definition: In vitro cloning technique amplifying specific DNA sequences efficiently.
- Principle: Repeating cycles of DNA synthesis utilizing heat-stable enzymes (and primers) for efficient target amplification.
- Components: DNA polymerase, primers, DNA template, dNTPs.
- Steps: Denaturing, Annealing, and Extending using DNA polymerase catalyzing primer extension.
- Applications: Diagnose infectious diseases, genetic disorders, genetic engineering, forensic science, and environmental studies.
- Types: Conventional, Multiplex, Nested, and other specialized PCR variants.
Urine Sheet
- This is a form to record specific urine analysis results.
- Results of urine tests are recorded, including details about physical characteristics (volume, color, odor) and chemical properties (reducing sugar, ketone bodies, proteins, urea, phosphates, and bile salts/bile pigments).
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Description
Test your knowledge on various aspects of blood and urine analysis. This quiz covers the processes and components involved in centrifugation, protein content in plasma, and indicators of health based on urine characteristics. Dive into the details of common conditions like gout and the significance of test results.