Biological Membranes and Proteins Quiz

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Questions and Answers

What role does Carnitine acyltransferase I (CAT I) play in the carnitine shuttle?

  • It facilitates the breakdown of acyl CoA.
  • It moves the acyl chain onto CoA from carnitine.
  • It helps translocate acyl carnitine across the inner membrane.
  • It moves the acyl chain onto carnitine from CoA. (correct)

Which molecule is produced at the end of the complete oxidation of 16:0 CoA in the mitochondrial matrix?

  • 108 ATP (correct)
  • 7 FADH2
  • 8 NADH
  • 23 CO2 (correct)

What triggers the phosphorylation of E1 by PD kinase?

  • NADH availability
  • Dephosphorylation by PD phosphatase
  • Allosteric control of PD kinase (correct)
  • Increased levels of Acetyl CoA

How does the citric acid cycle (CAC) contribute to ATP production from fats?

<p>By processing acetyl CoA released from fatty acid degradation. (D)</p> Signup and view all the answers

Which molecule stimulates PD phosphatase activity?

<p>Ca2+ (C)</p> Signup and view all the answers

Which of the following statements about fatty acid activation is correct?

<p>It requires 2 ATP and produces acyl CoA. (A)</p> Signup and view all the answers

What is the primary regulatory factor for fatty acid breakdown?

<p>Epinephrine and glucagon (B)</p> Signup and view all the answers

What effect does high energy levels have on the TCA cycle?

<p>Inhibits the cycle (D)</p> Signup and view all the answers

Which complex is linking the TCA cycle to oxidative phosphorylation?

<p>Complex II (B)</p> Signup and view all the answers

What happens to the citric acid cycle when ATP and NADH levels are high in mitochondria?

<p>The CAC slows down to allow fat synthesis from acetyl CoA. (B)</p> Signup and view all the answers

Which statement about the transport of fatty acids into the mitochondria is true?

<p>The carnitine shuttle permits fatty acid entry using Carnitine acyltransferase I. (B)</p> Signup and view all the answers

What is the primary role of F1 in ATP synthase?

<p>Catalytic synthesis of ATP (C)</p> Signup and view all the answers

What is required for the synthesis of OAA in relation to fatty acid catabolism?

<p>Amino acids or pyruvate processed by pyruvate carboxylase. (C)</p> Signup and view all the answers

What does a negative delta G indicate for TCA cycle reactions?

<p>Favorable reaction direction (C)</p> Signup and view all the answers

Which statement about uncouplers is true?

<p>They prevent ATP synthesis (A)</p> Signup and view all the answers

Which of the following is a primary function of the TCA cycle?

<p>Produce NADH and FADH2 for oxidative phosphorylation (B)</p> Signup and view all the answers

What is the result of increased acetyl-CoA concentration within the TCA cycle?

<p>Enhanced production of citric acid (D)</p> Signup and view all the answers

What type of pathway is the TCA cycle classified as?

<p>Amphibolic (A)</p> Signup and view all the answers

What can glucagon signalling trigger that can worsen hyperglycemia?

<p>GNG (Gluconeogenesis) (C)</p> Signup and view all the answers

Which condition can occur when blood glucose levels are low and insulin is present?

<p>Hypoglycemia (C)</p> Signup and view all the answers

What does the Cori cycle utilize to aid in gluconeogenesis?

<p>Lactate and non-carbohydrate precursors (B)</p> Signup and view all the answers

Which component is necessary for gluconeogenesis to proceed in the liver?

<p>ATP (A)</p> Signup and view all the answers

How do glycolysis and gluconeogenesis influence each other?

<p>They are reciprocally regulated via allosteric regulation and phosphorylation. (D)</p> Signup and view all the answers

What is the first reaction in the fatty acid synthase process?

<p>Condensation reaction (B)</p> Signup and view all the answers

What is a consequence of anaerobic conditions in a cell?

<p>Conversion of glucose to lactate (A)</p> Signup and view all the answers

What role do lipids play in cellular signaling?

<p>They assist in transmitting signals across membranes. (A)</p> Signup and view all the answers

How many malonyl CoA molecules are needed in total to produce a 16-carbon fatty acid?

<p>7 (C)</p> Signup and view all the answers

What essential characteristic allows membrane proteins to move ions across the membrane?

<p>Their specific structural features (C)</p> Signup and view all the answers

What is the role of desaturases in fatty acid synthesis?

<p>To introduce cis bonds (B)</p> Signup and view all the answers

What contributes to the formation of triglycerides (TAGs)?

<p>Combination of DAG and acyltransferase (A)</p> Signup and view all the answers

Which component is essential for the structure of lipoproteins?

<p>Monolayer of phospholipids (B)</p> Signup and view all the answers

What is the primary metabolic precursor for cholesterol synthesis?

<p>Acetyl CoA (C)</p> Signup and view all the answers

What is the function of apoproteins in lipoproteins?

<p>Orient hydrophilic chains outward in the lipoprotein structure (D)</p> Signup and view all the answers

In cholesterol metabolism, which enzyme's inhibition primarily regulates cholesterol production?

<p>HMG-CoA reductase (A)</p> Signup and view all the answers

What happens to lipoprotein remnants after delivering fatty acids and cholesterol to the tissues?

<p>They are recycled back to the liver (B)</p> Signup and view all the answers

What is required in large amounts for the anabolic pathway of fatty acid synthesis?

<p>NADPH and ATP (D)</p> Signup and view all the answers

What best describes the primary function of secondary active transport in cellular processes?

<p>Using an electrochemical gradient to move substances into the cell. (B)</p> Signup and view all the answers

Which of the following correctly differentiates between anabolic and catabolic pathways?

<p>Anabolic pathways require energy and synthesize molecules, while catabolic pathways release energy by breaking down molecules. (B)</p> Signup and view all the answers

What role do carbohydrates play in biochemical processes, especially in energy production?

<p>They provide energy through glycolysis and may be converted into various metabolites. (A)</p> Signup and view all the answers

What is the significance of the P/O ratio in cellular respiration?

<p>It measures ATP produced per oxygen atom consumed during electron transport. (A)</p> Signup and view all the answers

Which enzyme's regulation is central to the control of gluconeogenesis?

<p>Fructose-1,6-bisphosphatase. (D)</p> Signup and view all the answers

What defines the significance of phosphoryl transfer potential in high-energy molecules?

<p>It provides energy for enzyme-catalyzed reactions through ATP hydrolysis. (C)</p> Signup and view all the answers

In which conditions is fat synthesis favored over lipolysis?

<p>In the presence of surplus carbohydrates and energy abundance. (C)</p> Signup and view all the answers

What distinguishes 'good' cholesterol (HDL) from 'bad' cholesterol (LDL)?

<p>HDL carries cholesterol away from arteries, while LDL deposits it in arterial walls. (A)</p> Signup and view all the answers

What role do chylomicrons play in lipid metabolism?

<p>They are made in the small intestine from dietary fats. (B)</p> Signup and view all the answers

Which enzyme is responsible for converting lactate back to NAD+ during anaerobic metabolism?

<p>Lactate dehydrogenase (D)</p> Signup and view all the answers

What substance primarily dictates the process of ketogenesis in the liver?

<p>Acetyl CoA (A)</p> Signup and view all the answers

Which pathway allows the liver to convert lactate into glucose?

<p>Cori cycle (A)</p> Signup and view all the answers

How does insulin affect blood glucose levels?

<p>It stimulates glycolysis and reduces glycogenolysis. (D)</p> Signup and view all the answers

What is the primary consequence of prolonged ketoacidosis?

<p>Altered protein structure and function. (B)</p> Signup and view all the answers

In the absence of insulin, what metabolic processes are primarily affected?

<p>Glucose uptake is impaired. (D)</p> Signup and view all the answers

Which lipoprotein is known as the 'bad' cholesterol?

<p>Low density lipoprotein (LDL) (A)</p> Signup and view all the answers

What effect does high energy charge (ATP) have on glycolysis and gluconeogenesis?

<p>Inhibits glycolysis and stimulates gluconeogenesis. (D)</p> Signup and view all the answers

During which metabolic condition does the liver synthesize ketone bodies?

<p>Low insulin presence (B)</p> Signup and view all the answers

What is the primary product of gluconeogenesis in the liver?

<p>Glucose (D)</p> Signup and view all the answers

What is the function of lipoprotein lipase in lipid metabolism?

<p>Hydrolyze triglycerides in lipoproteins. (D)</p> Signup and view all the answers

Which of the following statements about the liver's role in cholesterol metabolism is true?

<p>The liver regulates cholesterol levels and recycles lipoproteins. (C)</p> Signup and view all the answers

What is a significant marker of high blood glucose over time?

<p>HbA1c (D)</p> Signup and view all the answers

Flashcards

Product inhibition

A type of feedback inhibition where the product of a metabolic pathway inhibits an earlier enzyme in the pathway.

PD kinase

The enzyme that phosphorylates pyruvate dehydrogenase (PDH), leading to increased activation.

PD phosphatase

The enzyme that removes the phosphate group from phosphorylated PDH, restoring its activity.

Allosteric regulator

A molecule that regulates the activity of an enzyme by binding to a site other than the active site.

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Acetyl-CoA

The central molecule in energy metabolism, produced from various fuel sources and used in the TCA cycle.

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TCA cycle

A series of biochemical reactions that oxidizes fuel molecules to produce ATP.

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Substrate-level phosphorylation

The process of using a substrate's energy to directly convert ADP to ATP.

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NADH and FADH2

Electron carrier proteins that transfer electrons in the electron transport chain (ETC).

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Electron transport chain (ETC)

The movement of electrons through a series of carriers, releasing energy to pump protons across the mitochondrial membrane.

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ATP synthase

An enzyme that uses the proton gradient across the mitochondrial membrane to synthesize ATP.

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Anabolic Pathways

Anabolic pathways build complex molecules from simpler ones, requiring energy input.

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Catabolic Pathways

Catabolic pathways break down complex molecules into simpler ones, releasing energy.

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Enzymes in Pathways

Enzymes are proteins that catalyze (speed up) biochemical reactions within metabolic pathways.

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Thermodynamics in Pathways

The net change in free energy (ΔG) determines whether a reaction is energetically favorable (negative ΔG) or unfavorable (positive ΔG).

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Phosphoryl Transfer Potential

Phosphoryl group transfer potential refers to the ability of a molecule to donate a phosphate group, releasing energy.

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Glycolysis

Glycolysis is a metabolic pathway that breaks down glucose into pyruvate, generating ATP and reducing equivalents.

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Electron Transport Chain

The electron transport chain uses a series of electron carriers to generate a proton gradient across the mitochondrial membrane, ultimately driving ATP synthesis.

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Beta Oxidation

Beta oxidation is the catabolic process that breaks down fatty acids into acetyl-CoA, generating reducing equivalents (NADH and FADH2) for ATP production.

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Carnitine Shuttle

A process that regulates the transport of fatty acid molecules across the mitochondrial membrane, enabling them to be broken down for energy.

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Carnitine Acyltransferase I (CAT I)

An enzyme that catalyzes the transfer of an acyl group from coenzyme A (CoA) to carnitine, allowing fatty acids to enter the mitochondria.

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Carnitine Acyltransferase II (CAT II)

An enzyme that catalyzes the transfer of an acyl group from carnitine back to CoA, releasing the fatty acid into the mitochondrial matrix for breakdown.

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Citric Acid Cycle (CAC)

A series of chemical reactions that occur in the mitochondria, oxidizing acetyl CoA to produce energy for the cell.

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Oxidative Phosphorylation

A process that uses the energy from glucose, fatty acids, and amino acids to create ATP, the primary energy currency of the cell.

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Fatty Acid Synthesis

The process of synthesizing fats from excess carbohydrates, proteins, or other molecules.

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Gluconeogenesis (GNG)

A metabolic process that generates glucose from non-carbohydrate sources like pyruvate, lactate, glycerol, and amino acids. It occurs primarily in the liver and kidneys, primarily when blood glucose levels are low.

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Cori Cycle

A cycle where lactate produced in anaerobic conditions is transported to the liver and used as a substrate for gluconeogenesis. This process helps regenerate glucose from lactate, reducing lactic acid buildup in the body.

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Irreversible Steps of Glycolysis

The irreversible steps of glycolysis involve enzymes that are bypassed in GNG. These are the steps that are highly regulated and can be influenced by hormonal signals.

  • Step 1: Hexokinase / Glucokinase
  • Step 3: Phosphofructokinase 1 (PFK1)
  • Step 10: Pyruvate Kinase
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Membrane Fluidity

The ability of a cell membrane to maintain its fluidity and flexibility, which is crucial for proper function. It allows molecules to move within the membrane and interact with each other.

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Integral Membrane Proteins

Proteins that are embedded within the cell membrane, often spanning the entire membrane. They play crucial roles in transport, signaling, and other vital cellular functions.

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Detergents and Salt for Membrane Protein Purification

Detergents are amphipathic molecules that can disrupt the lipid bilayer of cell membranes, allowing for the extraction of integral membrane proteins. Solvents like salt can also help solubilize and purify proteins.

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Passive Transport

The process where a substance moves across a cell membrane without requiring energy. The driving force is a concentration gradient or electrical potential.

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Active Transport

The movement of substances across a cell membrane against their concentration gradient, requiring energy input. It's often facilitated by membrane pumps or other transport proteins.

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Condensation Reaction (Fatty Acid Synthesis)

In fatty acid synthesis, the initial step where malonyl CoA adds two carbons to a growing fatty acid chain, releasing CO2.

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Redox Reaction in Fatty Acid Synthesis

The second step in fatty acid synthesis, where a reducing enzyme (KR) uses NADPH to reduce the newly added carbons, resulting in a saturated chain.

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Dehydration Reaction in Fatty Acid Synthesis

The third step in fatty acid synthesis where the fatty acid chain undergoes dehydration, catalyzed by a dehydratase (DH), releasing water.

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ER-catalyzed Reduction (Fatty Acid Synthesis)

The fourth step in fatty acid synthesis where an enzyme (ER) utilizes NADPH to promote the reduction of a double bond in the growing fatty chain, resulting in a saturated chain.

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Fatty Acid Synthesis (FAS)

The process of building fatty acid chains, involving the repetitive use of malonyl CoA and a series of enzyme-catalyzed reactions: condensation, reduction, dehydration, and reduction.

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Acetyl CoA Carboxylase (ACC)

An enzyme responsible for converting acetyl CoA to malonyl CoA, a key step in fatty acid synthesis.

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TAG Formation

The process of forming triglycerides (TAGs) from glycerol and fatty acids.

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Lipoproteins

Molecules that transport hydrophobic fats (like TAGs and cholesterol) through the bloodstream.

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Apoproteins

Proteins that are embedded in the surface of lipoproteins, facing the aqueous environment with their hydrophilic side and facing the hydrophobic core with their hydrophobic side.

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Cholesterol

A crucial component of cell membranes that is also used to synthesize hormones, bile salts, and vitamin D3.

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Ketogenesis

The breakdown of fat reserves, primarily triglycerides, into glycerol and fatty acids. It occurs in the liver when glucose levels are low and acetyl-CoA levels are high. This pathway generates ketone bodies (acetoacetate, beta-hydroxybutyrate, and acetone) which can be used as energy by the brain, heart, muscle, and kidney cells.

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Lactate

A biochemical marker of anaerobic metabolism, indicating a lack of oxygen and the use of glucose for energy production without the electron transport chain.

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Low-density lipoprotein (LDL)

A type of lipoprotein, also known as 'bad cholesterol,' that carries cholesterol from the liver to cells throughout the body. High levels of LDL increase the risk of heart disease.

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High-density lipoprotein (HDL)

A type of lipoprotein, also known as 'good cholesterol,' that picks up excess cholesterol from cells and transports it back to the liver for recycling.

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Ketoacidosis

A metabolic state characterized by high levels of ketone bodies in the blood, primarily due to prolonged fasting, low-carb diets, or poorly controlled diabetes. This can lead to a drop in blood pH, causing acidosis.

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Insulin

A hormonal signal that stimulates glucose uptake and storage as glycogen in cells. It also inhibits glucagon release, promoting energy storage.

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Chylomicron

A type of lipoprotein produced in the small intestine after a meal, responsible for transporting dietary fats (triglycerides) to the liver and other cells.

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Apoprotein B100

A protein that helps regulate the expression and/or activity of HMG-CoA reductase - the enzyme that controls cholesterol synthesis.

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Very low-density lipoprotein (VLDL)

A type of lipoprotein that is responsible for transporting triglycerides from the liver to other cells for energy use.

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Deamination

The process of removing the amino group (NH2) from amino acids, a step in their metabolism. It's important as it generates ammonia, which needs to be detoxified through the urea cycle.

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Intermediate-density lipoprotein (IDL)

A type of lipoprotein that is formed from VLDL after some triglycerides have been removed, and it mainly carries cholesterol.

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Lipoprotein lipase

An enzyme that breaks down triglycerides, primarily found in tissues like heart, muscle, and adipose.

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Glucose 6-phosphatase

An enzyme that hydrolyzes glucose 6-phosphate to produce free glucose in the liver, allowing it to be released into the bloodstream.

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Study Notes

Learning Goals

  • Review the composition and roles of biological membranes and how diverse chemical structures of molecules contribute to their formation.
  • Explain how fluorescence microscopy can be used to visualize the movement of molecules in a membrane and why membrane fluidity is important.
  • Define unique properties of integral membrane proteins and predict the topology of a membrane protein based on the amino acids present.
  • Describe the role of detergents and salt when purifying a membrane protein.
  • Explain how the structure of a membrane protein is crucial for its ability to move ions, molecules, or transmit signals across the membrane.
  • Describe the essential features of the main types of signaling pathways.
  • Identify the role of lipids and enzymes in transmitting signals across the membrane.
  • Distinguish between passive and primary vs. secondary active transport.
  • Compare the general organization and regulation of enzymes within pathways.
  • Explain the importance of phosphoryl transfer potential for high energy molecules.
  • Explain the importance of carbohydrate structure for biochemical processes.
  • Describe the organization of functional groups and how they contribute to carbohydrate complexity (monosaccharides and polysaccharides).
  • Differentiate between the enzymatic synthesis and breakdown of complex carbohydrates.
  • Describe how carbohydrates are transported across the plasma membrane and into the cell.
  • Summarize how glycolysis breaks down glucose for energy production.
  • Examine the role of thermodynamics as a driving force in glycolysis and glycogen synthesis.
  • Describe how glycolysis can be regulated depending on metabolite concentrations and cellular ATP requirements.
  • Examine how hormonal signaling can lead to glucose uptake, use, storage, or production.
  • Compare the regulation and mechanisms of the enzymes involved.

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