Pharmacology Lec 1-4

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Questions and Answers

What is the central unifying principle of pharmacology?

  • The chemical control of physiology
  • The concentration-response function (correct)
  • The study of how drugs affect the body
  • The development of new drugs

Which of these is NOT considered a component of Pharmacokinetics?

  • Metabolism
  • Distribution
  • Ligand/receptor interactions (correct)
  • Absorption

What does ADME stand for in the context of pharmacology?

  • Activation, Distribution, Metabolism, Excretion
  • Absorption, Dilution, Metabolism, Elimination
  • Administration, Dosage, Metabolism, Excretion
  • Absorption, Distribution, Metabolism, Elimination (correct)

Which of these is an application of pharmacology?

<p>Developing new antibiotics (D)</p> Signup and view all the answers

Pharmacology seeks to define the relationship between:

<p>Chemical concentration and physiological response (D)</p> Signup and view all the answers

What term is used to describe the building block units of biological macromolecules?

<p>Monomers (D)</p> Signup and view all the answers

Which of the following is NOT classified as a nucleotide?

<p>Glucose (C)</p> Signup and view all the answers

What is the term for the combination of three monomers?

<p>Trimer (C)</p> Signup and view all the answers

Which fatty acid is specifically mentioned as an important building block organic molecule?

<p>Oleic Acid (D)</p> Signup and view all the answers

What key feature allows macromolecules to assemble and gain emergent properties?

<p>Polymerization (A)</p> Signup and view all the answers

Which of the following correctly describes the difference between oligomers and polymers?

<p>Oligomers consist of a few units while polymers consist of many monomers. (D)</p> Signup and view all the answers

What is an example of a carbohydrate monomer and its corresponding polymer?

<p>Glucose and Amylose (A)</p> Signup and view all the answers

Which statement correctly describes the role of ATP?

<p>ATP serves as an energy currency of the cell. (D)</p> Signup and view all the answers

How are peptides and proteins structured?

<p>Peptides are polymers formed from amino acid monomers. (D)</p> Signup and view all the answers

What defines a ligand in biological systems?

<p>A ligand forms a complex with a biomolecule. (A)</p> Signup and view all the answers

Which description is accurate for the term 'agonist'?

<p>An agonist forms a complex and triggers a physiological response. (A)</p> Signup and view all the answers

What do proteins require for their structural complexity?

<p>Repeating structural features called domains. (B)</p> Signup and view all the answers

How does multimerization of proteins affect their function?

<p>It involves combining with other proteins for greater complexity. (D)</p> Signup and view all the answers

Which example illustrates a lipid monomer and its polymer?

<p>Fatty Acid and Triglyceride (A)</p> Signup and view all the answers

What is the primary function of bradykinin?

<p>To regulate blood pressure. (D)</p> Signup and view all the answers

What is the name given to the process by which monomers are assembled into larger macromolecules?

<p>Polymerization (B)</p> Signup and view all the answers

Which of the following is NOT a key feature of macromolecules?

<p>Their capacity for depolymerization (E)</p> Signup and view all the answers

Which of the following is an example of a dimer?

<p>A polypeptide chain with two amino acids (E)</p> Signup and view all the answers

Which of the following is NOT a monosaccharide?

<p>Sucrose (A)</p> Signup and view all the answers

Which of the following is NOT a nucleotide?

<p>DNA (A)</p> Signup and view all the answers

Which of the following is a type of fatty acid?

<p>Omega 3 Fatty Acids (B)</p> Signup and view all the answers

Which of the following is an example of an amino acid?

<p>Tryptophan (C)</p> Signup and view all the answers

Which of the following is a key feature of a polymer?

<p>It can have emergent properties that differ from its monomers (A)</p> Signup and view all the answers

Which of the following correctly describes the relationship between monomers and polymers?

<p>Monomers are the building blocks of polymers. (A)</p> Signup and view all the answers

Why is polymerization an important process for life?

<p>It allows cells to create unique structures and functions from a limited set of building blocks. (D)</p> Signup and view all the answers

Which of the following is NOT a component of Pharmacokinetics?

<p>Ligand binding (A)</p> Signup and view all the answers

What is the primary independent variable in pharmacological research?

<p>Chemical concentration (D)</p> Signup and view all the answers

What does the term 'dose-response function' represent in pharmacology?

<p>The relationship between drug concentration and physiological effect (B)</p> Signup and view all the answers

Which branch of pharmacology focuses on the effects of drugs on the body?

<p>Pharmacodynamics (B)</p> Signup and view all the answers

What is the primary goal of drug discovery in the context of pharmacology?

<p>To develop and produce new pharmaceuticals (B)</p> Signup and view all the answers

Which of the following is considered a key principle of pharmacodynamics?

<p>The binding affinity of a drug to its target receptor (B)</p> Signup and view all the answers

How does pharmacognosy contribute to the field of pharmacology?

<p>It focuses on the identification and extraction of medicinal compounds from plants (D)</p> Signup and view all the answers

Which of the following BEST describes the role of metabolism in pharmacokinetics?

<p>Metabolism is the process of breaking down a drug into inactive metabolites. (C)</p> Signup and view all the answers

Which statement accurately reflects the relationship between pharmacology and modern therapeutics?

<p>Pharmacology is the study of drug interactions with the body; modern therapeutics applies this knowledge to treat diseases. (D)</p> Signup and view all the answers

What is the primary function of a ligand in the context of pharmacology?

<p>To bind to a receptor and initiate a cellular response (A)</p> Signup and view all the answers

What is the main defining characteristic of a molecule that acts as a ligand?

<p>It binds to a specific biomolecule. (C)</p> Signup and view all the answers

What is an agonist's primary role in a biological system?

<p>To initiate a physiological response by binding to a receptor. (A)</p> Signup and view all the answers

How do proteins achieve their diverse and complex structures?

<p>By folding upon themselves and interacting with other proteins. (A)</p> Signup and view all the answers

What is a key factor that contributes to the versatility and diversity of protein functions?

<p>The ability to self-assemble into complex structures. (C)</p> Signup and view all the answers

Imagine a protein that has multiple subunits, each contributing to its overall function. What process best describes this phenomenon?

<p>Oligomerization. (D)</p> Signup and view all the answers

What is the primary function of bradykinin, a peptide hormone?

<p>To regulate blood pressure. (C)</p> Signup and view all the answers

Which of the following accurately describes a biomolecule?

<p>A molecule that is fundamental to all life processes. (C)</p> Signup and view all the answers

How do antagonists differ from agonists in their interaction with receptors?

<p>Antagonists block receptor activation, whereas agonists initiate a response. (D)</p> Signup and view all the answers

Which of the following is an accurate example of a monomer and its corresponding polymer?

<p>Palmitic Acid and Triglyceride. (B)</p> Signup and view all the answers

How does the existence of protein domains contribute to structural complexity?

<p>Domains are repeating structural units that can be combined in various ways, creating diverse structures. (A)</p> Signup and view all the answers

What does adenylyl cyclase convert in the plasma membrane?

<p>Cytosolic ATP to cAMP (B)</p> Signup and view all the answers

What role do β-arrestins play in GPCR internalization?

<p>They facilitate receptor polymerization into clathrin cages (D)</p> Signup and view all the answers

What is the result of microinjecting IP3 into neuroepithelioma cells?

<p>Release of calcium into the cytoplasm (C)</p> Signup and view all the answers

What occurs following agonist binding to a GPCR?

<p>GRKs are activated and phosphorylate the receptor (C)</p> Signup and view all the answers

Which of the following substances is known to inhibit adenylyl cyclase activity?

<p>None of the above (D)</p> Signup and view all the answers

What triggers the recruitment of β-arrestins to the cell membrane?

<p>Phosphorylation of the receptor's C-terminus (D)</p> Signup and view all the answers

What happens to receptors that are internalized into clathrin-coated vesicles?

<p>They may either be degraded or recycled (D)</p> Signup and view all the answers

What are the components of a sweet taste receptor?

<p>A heterodimer of two full-length GPCR monomers (A)</p> Signup and view all the answers

What does GTP convert into during G protein activation?

<p>GDP (C)</p> Signup and view all the answers

What is the effect of caffeine on intracellular signaling?

<p>It prevents the action of phosphodiesterase (A)</p> Signup and view all the answers

Which process involves the use of GRKs following receptor activation?

<p>Phosphorylation for receptor internalization (B)</p> Signup and view all the answers

What role does IP3 play in signal transduction?

<p>It opens up calcium channels on the ER. (D)</p> Signup and view all the answers

Which process does phospholipase C facilitate?

<p>Hydrolysis of a phospholipid (A)</p> Signup and view all the answers

What causes calcium ions to exit the endoplasmic reticulum into the cytoplasm?

<p>Open IP3R channels (B)</p> Signup and view all the answers

What type of molecule activates the sweet taste receptor?

<p>Specific tastant ligands (D)</p> Signup and view all the answers

Which component is NOT a product of phospholipase C activity?

<p>GTP (A)</p> Signup and view all the answers

Which factor contributes to the activation of G proteins?

<p>GTP binding (B)</p> Signup and view all the answers

In which cellular compartment is calcium primarily stored before its release by IP3?

<p>Endoplasmic reticulum (B)</p> Signup and view all the answers

What structural feature of the sweet taste receptor is crucial for binding ligands?

<p>Venus flytrap binding pocket (B)</p> Signup and view all the answers

What is the primary function of nuclear receptors?

<p>To regulate the expression of specific genes (B)</p> Signup and view all the answers

Which component is found in the structure of nuclear receptors?

<p>Ligand binding domain (A)</p> Signup and view all the answers

Which of the following examples is NOT an agonist for nuclear receptors?

<p>Aspirin (C)</p> Signup and view all the answers

What initiates the translocation of the Ligand-Receptor complex to the nucleus?

<p>Ligand binding to the receptor (D)</p> Signup and view all the answers

During the mechanism of action of Class II nuclear receptors, what is the role of the coactivator protein?

<p>To enhance transcription of RNA (A)</p> Signup and view all the answers

What occurs in the cytosol before the ligand-receptor complex enters the nucleus?

<p>Heat Shock Protein dissociates from the receptor (B)</p> Signup and view all the answers

What is the initial effect of ligand binding to the thyroid hormone receptor?

<p>Dissociation of corepressor and recruitment of coactivator (D)</p> Signup and view all the answers

Which of the following is a key role of the Hormone Response Element (HRE) in the nuclear receptor mechanism?

<p>To anchor the Ligand-Receptor complex on DNA (C)</p> Signup and view all the answers

What occurs after the Ligand-Receptor complex binds to the DNA?

<p>The transcription initiation complex is formed (D)</p> Signup and view all the answers

Which class of G protein coupled receptors (GPCRs) is characterized by a long amino terminus involved in ligand binding?

<p>Class B (C)</p> Signup and view all the answers

Which type of ion channel primarily opens in response to a change in membrane potential?

<p>Voltage Gated channels (D)</p> Signup and view all the answers

What is the characteristic structural feature of Class A GPCRs?

<p>Small molecule binding site in a lipophilic pocket (D)</p> Signup and view all the answers

What is the mechanism by which the Protease Activated Receptor (PAR-1) is activated?

<p>Tethered ligand mechanism after protease cleavage (A)</p> Signup and view all the answers

Which type of receptor is known to undergo significant changes upon ligand binding, forming functional heterodimers?

<p>Class C GPCRs (B)</p> Signup and view all the answers

What is one of the main functions of transport proteins in the context of pharmacology?

<p>Facilitating drug absorption (C)</p> Signup and view all the answers

Which statement accurately describes enzymes in the context of drug targets?

<p>They can be crucial targets for drug development. (B)</p> Signup and view all the answers

Which class of GPCRs is the most numerous and diverse?

<p>Class A (C)</p> Signup and view all the answers

Which of the following statements about ligand-gated channels is true?

<p>They are activated by binding of specific ligands. (C)</p> Signup and view all the answers

Which of these receptors typically binds to peptides and small proteins?

<p>Class B GPCRs (B)</p> Signup and view all the answers

What is the name of the enzyme that breaks down acetylcholine?

<p>Acetylcholinesterase (A)</p> Signup and view all the answers

Which type of ion channel is activated by a chemical messenger like acetylcholine or capsaicin?

<p>Ligand-gated (C)</p> Signup and view all the answers

What is the primary function of the nicotinic acetylcholine receptor?

<p>To allow the flow of sodium and potassium ions in response to acetylcholine binding (D)</p> Signup and view all the answers

What does the term "conductance" refer to in the context of ion channels?

<p>The rate of ion flow through the channel (D)</p> Signup and view all the answers

Which of the following is a technique used to measure the conductance of a single ion channel?

<p>Patch Clamp (B)</p> Signup and view all the answers

How do voltage-gated ion channels respond to changes in membrane potential?

<p>They change their conformation (shape) to open or close (A)</p> Signup and view all the answers

Where are nicotinic receptors typically located?

<p>Postsynaptic membrane of neuromuscular junctions (C)</p> Signup and view all the answers

What is the primary role of transporters in the nervous system?

<p>To move neurotransmitters across membrane barriers (A)</p> Signup and view all the answers

How do ion channel agonists affect the behavior of ion channels?

<p>They stabilize the open state of the channel, increasing its frequency of opening (B)</p> Signup and view all the answers

Which of the following is NOT a characteristic of ion channels?

<p>They are only activated by ligands (C)</p> Signup and view all the answers

Which of the following statements about the role of transporters in drug response is TRUE?

<p>Facilitated diffusion operates by binding drugs to specific sites and moving them across the membrane with the help of concentration gradients. (A)</p> Signup and view all the answers

Which of the following is a characteristic of ABC (ATP Binding Cassette) transporters, such as P-gp?

<p>They require the hydrolysis of ATP to function. (C)</p> Signup and view all the answers

Which of the following correctly describes the difference between uniporters, symporters, and antiporters?

<p>Uniporters transport a single substrate down its concentration gradient, while symporters move two substrates in the same direction, and antiporters move two substrates in opposite directions. (B)</p> Signup and view all the answers

Which of the following scenarios correctly describes how an efflux transporter like P-gp could affect drug response?

<p>P-gp pumps a drug out of the cell, reducing its concentration at the target site and potentially decreasing its efficacy. (D)</p> Signup and view all the answers

Which of the following types of transporter is most likely to be responsible for the transport of neurotransmitters across the synaptic cleft?

<p>Active transporters that require ATP hydrolysis. (D)</p> Signup and view all the answers

Which of the following is NOT a characteristic of SLC (Solute Carrier) transporters?

<p>They are primarily involved in the efflux of substrates out of the cell. (A)</p> Signup and view all the answers

If a drug is a substrate for an efflux transporter, what is the likely consequence for its pharmacokinetic profile?

<p>Reduced drug bioavailability due to its being pumped out of the cell before reaching the target site. (C)</p> Signup and view all the answers

Which of the following scenarios is an example of how transporters could be relevant to drug resistance?

<p>A drug inhibits a transporter that normally pumps a chemotherapy drug out of cancer cells, leading to higher intracellular drug levels and a better therapeutic response. (B)</p> Signup and view all the answers

Which of the following is a potential strategy to overcome drug resistance mediated by P-gp efflux?

<p>All of the above. (D)</p> Signup and view all the answers

Which of the following is the most accurate explanation for the concept of 'vectorial' transport?

<p>The movement of a substrate in a specific direction across the membrane. (B)</p> Signup and view all the answers

What is the primary function of enzymes in biological systems?

<p>To accelerate the rate of chemical reactions (B)</p> Signup and view all the answers

Kinases are a type of protein that regulates the activity of other proteins by:

<p>Adding a phosphate group (A)</p> Signup and view all the answers

Which of the following statements accurately describes cAMP's role in cell signaling?

<p>cAMP is a second messenger that activates protein kinase A (C)</p> Signup and view all the answers

What is the primary role of acetylcholinesterase in neurotransmission?

<p>To break down acetylcholine and terminate the signal (B)</p> Signup and view all the answers

How do enzymes increase the rate of chemical reactions?

<p>By lowering the activation energy of the reaction (D)</p> Signup and view all the answers

Which of these is a key characteristic that distinguishes kinases from other types of enzymes?

<p>Kinases catalyze the transfer of phosphate groups. (B)</p> Signup and view all the answers

What is the primary role of cAMP in activating protein kinase A (PKA)?

<p>cAMP binds to PKA and triggers its activation. (D)</p> Signup and view all the answers

How is the activity of acetylcholinesterase related to the ‘on-off’ nature of neurotransmission?

<p>Acetylcholinesterase prevents continuous stimulation by breaking down acetylcholine. (A)</p> Signup and view all the answers

Besides accelerating chemical reactions, what is another key characteristic of enzymes in biological systems?

<p>Enzymes are highly specific to the reactions they catalyze. (B)</p> Signup and view all the answers

What is the main difference between enzymes and other catalysts?

<p>Enzymes can be regulated, whereas other catalysts are not. (C)</p> Signup and view all the answers

What observation led Langley to propose the existence of a "receptive substance" at the neuromuscular junction?

<p>The observation that curare and nicotine have opposite effects on muscle contraction. (A)</p> Signup and view all the answers

What was the main problem that Langley's "receptive substance" concept aimed to address?

<p>The difficulty in explaining how vanishingly small concentrations of agonists could induce large biological responses. (A)</p> Signup and view all the answers

Which scientist's work on the localization of curare's effects contributed significantly to Langley's receptor concept?

<p>Claude Bernard (B)</p> Signup and view all the answers

Which of these is NOT a key feature of Langley's "receptive substance" concept?

<p>The selective inhibition of enzymes involved in cellular signaling pathways. (A)</p> Signup and view all the answers

How did Erlich's work on antibodies contribute to Langley's receptor concept?

<p>Erlich showed that drugs, like antibodies, possess specific binding sites for their target cells. (C)</p> Signup and view all the answers

What did Langley mean by the phrase "mutual antagonism" in the context of bioreactive chemicals?

<p>The ability of two chemicals to bind to the same site on a receptor and compete for binding. (C)</p> Signup and view all the answers

What does the concept of "saturability" imply in the context of Langley's work?

<p>There is a maximum concentration of a bioreactive chemical beyond which no further effect is observed. (C)</p> Signup and view all the answers

Which of the following scientists contributed to the development of the receptor concept through their work with antibodies?

<p>Paul Ehrlich (C)</p> Signup and view all the answers

What is the key difference between Langley's "receptive substance" concept and the modern concept of a receptor?

<p>Langley's concept focused on the interaction of chemicals with receptors on the cell membrane, while the modern concept includes intracellular receptors. (B), Langley's concept focused on the interaction of chemicals with receptors on the cell membrane, while the modern concept includes intracellular receptors. (C)</p> Signup and view all the answers

Which of these statements BEST describes the relationship between Langley's "receptive substance" and the modern concept of a receptor?

<p>Langley's concept was an early and rudimentary version of the modern receptor concept, which has been refined over time. (C)</p> Signup and view all the answers

In the context of receptor-ligand interactions, what does the term 'saturable' refer to?

<p>The existence of a limited number of receptors available for binding. (A)</p> Signup and view all the answers

What is the primary role of the constant 'k1' in the equation 'k1LD = k2LL' which describes the equilibrium of receptor-ligand interactions?

<p>It represents the rate of ligand binding to the receptor. (B)</p> Signup and view all the answers

Which of the following accurately describes the relationship between the association constant (KA) and the dissociation constant (KD) in the context of receptor-ligand interaction?

<p>KA is the reciprocal of KD, meaning KA = 1/ KD. (D)</p> Signup and view all the answers

What is the main implication of the 'Law of Mass Action' in understanding receptor-ligand interactions?

<p>The concentration of reactants and products at equilibrium determines the rate of reaction. (C)</p> Signup and view all the answers

Which of the following is NOT a characteristic of a system at equilibrium in receptor-ligand interactions?

<p>There are no further changes in receptor occupancy. (B)</p> Signup and view all the answers

What is the primary implication of the 'Hill-Langmuir Equation' in the context of receptor-ligand interactions?

<p>It helps predict the concentration of ligand required to achieve maximum receptor occupancy. (D)</p> Signup and view all the answers

What is the main rationale for considering receptor-ligand interactions as reversible chemical reactions?

<p>The interaction is based on non-covalent interactions that allow for dynamic binding and dissociation. (C)</p> Signup and view all the answers

Which of the following BEST describes the role of the 'association constant' (KA) in receptor-ligand interactions?

<p>It quantifies the affinity of the ligand for the receptor at equilibrium. (A)</p> Signup and view all the answers

Considering the statement 'Starting conditions are out of equilibrium; Movement from starting conditions toward equilibrium', what does this imply about the receptor-ligand interactions?

<p>The system is dynamic, with continuous changes in receptor occupancy until equilibrium is reached. (B)</p> Signup and view all the answers

If the concentration of a drug required to occupy 50% of its receptors is 10 nM, what is the affinity of the drug?

<p>10 nM (D)</p> Signup and view all the answers

A drug with a lower KD value will have a __________ affinity for its receptor compared to a drug with a higher KD value.

<p>higher (D)</p> Signup and view all the answers

Which of the following best describes the Hill-Langmuir equation?

<p>It quantifies the percentage of receptors occupied by a drug at a given concentration (A)</p> Signup and view all the answers

In the Hill-Langmuir equation, what does "[D]" represent?

<p>Concentration of the drug (D)</p> Signup and view all the answers

A drug with a high affinity for its receptor will typically have a __________ effect at lower concentrations compared to a drug with a low affinity.

<p>stronger (A)</p> Signup and view all the answers

What specific aspect of the neuromuscular junction did Bernard's curare experiments highlight?

<p>The existence of a unique site where curare exerts its effects. (C)</p> Signup and view all the answers

What aspect of curare's action did Claude Bernard demonstrate?

<p>Curare's mechanism of action as a neurotoxin. (C)</p> Signup and view all the answers

Based on Bernard’s experiments, what can be concluded about curare's mode of action?

<p>Curare interferes with the ability of motor nerves to signal muscle contraction. (C)</p> Signup and view all the answers

What was a key finding of Bernard’s experiments involving the ligation of an artery to the leg?

<p>Ligating the artery prevented curare from reaching the muscle, demonstrating its localized effect. (C)</p> Signup and view all the answers

What did Bernard's experiments with curare reveal about the role of sensory nerves?

<p>Sensory nerves are unaffected by curare, allowing pain signals to be transmitted even when motor nerves are blocked. (C)</p> Signup and view all the answers

What crucial conclusion can be drawn from Bernard’s curare experiments?

<p>The neuromuscular junction plays a critical role in transmitting nerve impulses. (C)</p> Signup and view all the answers

Claude Bernard was a pioneer in the field of physiology. His work involved applying which scientific method to medicine?

<p>Experimental design (D)</p> Signup and view all the answers

Which of the following statements BEST summarizes the significance of Claude Bernard's work on curare?

<p>Bernard demonstrated the importance of studying biological mechanisms through experimentation. (D)</p> Signup and view all the answers

What does a higher value of KD indicate about the affinity of a drug for its receptor?

<p>Lower affinity (D)</p> Signup and view all the answers

What are the units for the rate constant k1?

<p>M^-1 min^-1 (D)</p> Signup and view all the answers

What is the relationship between the rate constants k1 and k2, and the dissociation constant KD?

<p>KD = k2/k1 (D)</p> Signup and view all the answers

If the rate constant k1 is 1 and k2 is 0.2, what is the value of KD?

<p>0.2 (D)</p> Signup and view all the answers

Which of the following is TRUE regarding a high affinity drug?

<p>The drug will be more likely to remain bound to the receptor. (B)</p> Signup and view all the answers

If the rate constant k2 is decreased, what will happen to the KD?

<p>KD will decrease (B)</p> Signup and view all the answers

Why is the equilibrium condition crucial for understanding drug-receptor interactions?

<p>It represents the point where the rate of association equals the rate of dissociation. (A)</p> Signup and view all the answers

What is the primary focus of the hypothetical demonstration presented in the text?

<p>To illustrate how changes in rate constants affect affinity. (B)</p> Signup and view all the answers

Which of these statements correctly describes the relationship between kinetics and affinity?

<p>Kinetics can influence affinity by affecting the association and dissociation rates. (A)</p> Signup and view all the answers

If a drug has a high affinity for its receptor, what is the expected outcome for its biological effect?

<p>The drug will remain bound to the receptor for a longer time. (D)</p> Signup and view all the answers

Flashcards

Monosaccharides

Simple sugars like glucose and fructose used for energy.

Nucleotides

Building blocks of nucleic acids, such as ATP and AMP.

Fatty Acids

Long hydrocarbon chains that make up lipids, like oleic acid.

Amino Acids

Monomers that combine to form proteins; examples include glutamate and tryptophan.

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Polymerization

Process of linking monomers to form larger macromolecules.

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Pharmacology

The study of chemical control of physiological functions.

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Concentration-response function

The relationship between chemical concentration and physiological response.

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Pharmacodynamics

What the drug does to the body, focusing on interactions at receptors.

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Pharmacokinetics

What the body does to the drug, including absorption, distribution, metabolism, and elimination (ADME).

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ADME

Absorption, Distribution, Metabolism, Elimination; key processes in pharmacokinetics.

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Oligomer

A molecule consisting of a few monomer units.

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Polymer

A large molecule made up of many monomers.

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Monomer

A single building block unit that can join to form polymers.

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ATP

A monomer that acts as the energy currency of the cell.

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Glucose

A monomer that serves as a main nutrient source.

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Peptide

Short chain of amino acids acting as a monomer for proteins.

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Ligand

A molecule that binds to a biomolecule to form a complex.

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Agonist

A ligand that activates a receptor to produce a physiological response.

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Antagonist

A ligand that blocks a receptor's function or action.

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Independent variable

The factor manipulated in an experiment, here, chemical concentration.

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Dependent variable

The measured response in an experiment, reflecting physiological changes.

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Ligand/receptor interactions

The binding process between a ligand and a receptor, crucial for pharmacodynamics.

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Modern therapeutics

Current medical treatments that utilize pharmacological principles.

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Pharmacognosy

The study of drugs derived from natural sources, like plants.

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Bradykinin

A peptide hormone that regulates blood pressure.

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Triglyceride

A type of lipid formed from glycerol and fatty acids.

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Phospholipids

Lipids that form cell membranes with hydrophilic heads.

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Complex Protein Structures

Proteins that fold and often multimerize for function.

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Ligand-Protein Complex

The bond formed between a ligand and a biomolecule.

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Dimer

A molecule made of two monomer units.

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Trimer

A molecule composed of three monomer units.

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Tetramer

A molecule consisting of four monomer units.

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Pentamer

A molecule formed from five monomer units.

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Emergent Properties

New characteristics that arise when monomers combine into polymers.

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Drug Targets

Molecules in the body that drugs interact with to produce effects.

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GPCRs

G protein-coupled receptors, a large class of drug targets.

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Ion Channels

Proteins that allow ions to enter or exit a cell, critical for cellular signaling.

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Enzyme Linked Receptors

Receptors that have an enzymatic activity upon ligand binding, triggering cellular responses.

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Class A GPCRs

Most diverse GPCRs with small molecule binding sites within the 7 transmembrane (TM) domains.

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Class B GPCRs

GPCRs with a longer amino terminus, often binding larger ligands like peptides.

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Class C GPCRs

GPCRs with very large amino terminus that can form functional heterodimers.

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PAR-1

Protease Activator Receptor 1, a type of Class B GPCR that uses a tethered ligand mechanism.

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Binding Pocket

Region in a receptor where ligands can attach, initiating a response.

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Transporters

Proteins that help move substances across cell membranes, crucial for cellular function.

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IP3 Microinjection

A technique that introduces inositol trisphosphate (IP3) to evoke calcium release.

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Calcium Signaling

Intracellular process where calcium ions act as a second messenger in signaling pathways.

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Adenylyl Cyclase

An enzyme that converts ATP to cyclic AMP (cAMP) in the plasma membrane.

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β-Arrestins

Proteins that mediate GPCR desensitization and internalization.

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GPCR Internalization

Process where G-protein coupled receptors are taken inside the cell after activation.

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Clathrin-Coated Pits

Areas of the cell membrane that invaginate and internalize receptor complexes.

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GRKs

G protein-coupled receptor kinases that phosphorylate activated GPCRs.

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Endocytic Vesicle

A membrane-bound structure that encapsulates material taken in during endocytosis.

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Desensitization

A process where a cell becomes less responsive to a stimulus over time.

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Sweet Taste Receptor

A heterodimer consisting of two GPCR monomers that detects sweet flavors.

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G Protein

A protein that transmits signals inside cells by switching between active and inactive states using GTP and GDP.

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Phospholipase C (PLC)

An enzyme that hydrolyzes phospholipids to produce IP3 and DAG in cell signaling.

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IP3

Inositol trisphosphate, a second messenger that promotes calcium release from the ER.

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DAG

Diacylglycerol, a lipid that activates protein kinase C in signaling pathways.

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Intracellular Calcium Release

The process where calcium ions are released from storage in the ER and SR to initiate cellular responses.

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Endoplasmic Reticulum (ER)

An organelle that stores calcium and participates in protein synthesis and lipid metabolism.

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Signal Transduction Cascade

A series of molecular events initiated by an extracellular signal that leads to a cellular response.

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Nuclear Receptors

Transcription factors that bind DNA to regulate gene expression.

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Ligand Binding Domain

Part of nuclear receptors that binds specific ligands (molecules).

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DNA Binding Domain

Region of nuclear receptors that attaches to DNA sequences to influence transcription.

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Agonists for Nuclear Receptors

Molecules that activate nuclear receptors, such as steroid hormones.

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Class I Nuclear Receptors

Receptors that translocate to the nucleus after ligand binding to regulate transcription.

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Hormone Response Element (HRE)

Specific DNA sequence where ligand-receptor complex binds to initiate transcription.

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Corepressor Protein

A protein that binds to unoccupied nuclear receptors, inhibiting gene expression.

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Coactivator Protein

A protein that helps enhance transcription when a ligand binds to the receptor.

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Transcription Initiation Complex

A complex formed by proteins that start the transcription process of DNA to RNA.

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Heat Shock Protein (HSP)

A protein that assists in the proper folding and stabilization of nuclear receptors in the cytosol.

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Cleavage of Acetylcholine

Acetylcholinesterase breaks down acetylcholine into acetic acid and choline.

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Voltage-gated Ion Channels

Channels that open and close in response to changes in membrane potential.

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Nicotinic Acetylcholine Receptor (nAChR)

A ligand-gated channel activated by acetylcholine, allowing cations to flow.

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Conductance in Ion Channels

The rate of ion flow through an open channel, influenced by its state.

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Drug Agonists

Molecules that stabilize open states of ion channels, increasing activity frequency.

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Ligand-gated vs Voltage-gated

Ligand-gated channels open with a ligand; voltage-gated open with electrical signals.

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Conformational Change in Ion Channels

Physical alterations in channel structure affect ion conductance and flow.

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P-glycoprotein (P-gp)

An efflux transporter that decreases drug concentration in the body.

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Active Transport

Movement of substances requiring energy, often through ATP hydrolysis.

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Facilitated Diffusion

Passive movement of substances down a gradient without energy use.

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ABC Transporters

ATP-Binding Cassette family, primary active transporters that hydrolyze ATP.

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SLC Transporters

Solute Carrier family, involved in facilitated or secondary active transport.

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Primary Active Transport

Transport that directly uses ATP to move substances against their gradient.

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Secondary Active Transport

Uses the energy from primary transport indirectly to move substances.

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Uniporters, Symporters, Antiporters

Transport types: Uniporters (one in), Symporters (two in same direction), Antiporters (swap).

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Enzymes

Highly specific protein catalysts that increase reaction rates without being altered.

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Catalyst

A substance that increases the rate of a chemical reaction without being consumed.

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Kinases

Proteins that regulate the activity of other proteins through phosphorylation.

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Phosphorylation

The process of adding a phosphate group to a molecule, often regulating its activity.

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Protein Kinase A (PKA)

An enzyme activated by cAMP that regulates various cellular functions.

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Acetylcholinesterase

An enzyme that breaks down the neurotransmitter acetylcholine to terminate signals.

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Neurotransmitter Signal

Chemical signals that transmit information between neurons.

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Regulation of Cellular Events

The process by which various factors control cellular functions and responses.

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Curare

A compound that acts as a muscle relaxant by blocking certain receptors.

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Equilibrium

A state where no net change occurs in a system despite continuous activity.

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Reversible Chemical Reactions

Reactions between receptors and ligands that can occur in both forward and reverse directions.

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Hill-Langmuir Equation

Describes the relationship between drug concentration and receptor affinity at equilibrium.

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Law of Mass Action

Relates the rate of a reaction to the concentrations of its reactants and products.

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Association Constant (KA)

A measure of the affinity of a ligand for its receptor, derived from equilibrium concentrations.

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Dissociation Constant (KD)

The measure of how easily a ligand dissociates from its receptor, inversely related to KA.

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Claude Bernard

Father of Modern Physiology; applied the scientific method to medicine.

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Mechanism of Action

How curare affects the body by blocking nerve signals to muscles.

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Neuromuscular Junction

The site where motor neurons connect with muscle fibers, affected by curare.

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Electrical Stimulation in Bernard's Experiments

Showed that stimulating the nerve could lead to muscle contraction unless curare was present.

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Motor Nerves vs Sensory Nerves

Motor nerves control movement; sensory nerves carry pain signals, unaffected by curare.

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Reflex Movements

Reflex actions can occur in one leg despite paralysis in the other due to curare's selective action.

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Blood and Drug Effect

Curare must be carried by blood to work; ineffective when ingested or ligated.

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Affinity

The equilibrium state indicating how well a drug binds to a receptor.

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KD

Dissociation constant; the concentration at which 50% of receptors are occupied.

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Receptor Occupancy Curve

Graph that shows the relationship between drug concentration and receptor occupancy percentage.

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Fractional Receptor Occupancy

The percentage of receptors occupied by a drug at a given concentration.

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Equilibrium in binding

The state where the rate of association equals the rate of dissociation of ligand and receptor.

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Rate constants (k1, k2)

k1 is the rate constant for association, and k2 is for dissociation in a binding event.

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Units of k1 and k2

k1 has units of min-1 M-1, while k2 has units of min-1, crucial for calculating KD.

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Relationship of KD with affinities

Higher KD indicates lower affinity; lower KD reflects higher affinity between ligand and receptor.

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Affinity (concept)

The strength of the interaction between a ligand and its receptor.

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Rates of association and dissociation

Defined by equations k1[R][D] for association and k2[RD] for dissociation at equilibrium.

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Equilibrium constant equation

At equilibrium, KD = [R][D]/[RD], showcases the relationship of concentrations.

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Hypothetical KD scenarios

Manipulating k1 and k2 showcases different KD values, reflecting changes in binding affinity.

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Equilibrium concepts

Understanding the balance of forces in receptor-ligand interactions is key in pharmacodynamics.

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Receptive Substance

A site at which bioreactive chemicals bind to induce a biological response.

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Mutual Antagonism

When two substances oppose each other’s effects at a common site of action.

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Chemotherapeutic Index

The ratio of the toxic dose to the therapeutic dose of a drug.

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Saturable Effects

Maximal effects are achieved at a certain concentration of a substance; beyond that, no greater effect results.

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Efficacy of Small Molecules

Small molecules have distinct domains that allow them to bind to specific target cells effectively.

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Curare and Nicotine

Two compounds that exhibit mutual antagonism at the neuromuscular junction influencing muscle function.

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Claude Bernard's Contribution

Locally focused experiments revealed the action of curare on the neuromuscular junction, emphasizing specific sites of action.

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Bioreactive Chemicals

Substances that interact with cell receptors to produce biological actions, like neurotransmitters and drugs.

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Study Notes

Building Block Molecules

  • Four most important organic building blocks used by cells are monosaccharides, nucleotides, fatty acids, and amino acids.
  • Monosaccharides include glucose and fructose.
  • Nucleotides include ATP (adenosine triphosphate), AMP (adenosine monophosphate), and GTP (guanosine triphosphate).
  • Fatty acids include oleic acid and omega-3 fatty acids.
  • Amino acids include glutamate (glutamic acid), tryptophan, serine, and threonine.
  • Students should be able to identify these molecules by their structure.

Biological Macromolecules

  • Macromolecules have the ability to polymerize.
  • Polymerization efficiently assembles building blocks into large, complex molecules with emergent properties that support life.
  • Monomers are the individual building blocks.
  • Combining two monomers creates a dimer, three a trimer, etc; five monomers create a pentamer.
  • Oligomers consist of a few units, while polymers consist of many.
  • Individual building blocks have functions independent of polymerization.
  • Examples of building blocks and their assigned functions include:
    • ATP - energy currency of the cell, neurotransmitter/hormone.
    • Glutamic acid - nutrient, neurotransmitter.
    • Glucose - nutrient.

Examples of Monomers/Polymers

  • Glucose monomers form carbohydrates (like amylose, starch).
  • Adenosine Monophosphate (AMP) monomers form nucleotides/nucleic acids (like RNA).

Examples of Lipid Monomers/Polymers

  • Fatty acids monomers form lipids (like Palmitic acid), triglycerides, and phospholipids.
  • Glycerol monomers form triglycerides and phospholipids.

Peptides and Proteins

  • Peptides and proteins are polymers of amino acid monomers.
  • Amino acids combine to create peptides.
  • The sequence of amino acids forms a protein's primary structure.
  • A chain of amino acids folds into secondary structures like Alpha helices and Beta pleated sheets.
  • These then fold further into a tertiary structure.
  • If multiple polypeptide chains come together, a quaternary structure results.
  • Examples of peptides/proteins: Bradykinin (a peptide hormone), G protein-coupled receptor.
  • These structures determine their functions.

Proteins and Multimerization

  • Proteins can "multimerize" by combining with other proteins.
  • This forms a complex with a more specialized function.
  • Examples of complex functional units: heterotetrameric Voltage-gated potassium channel, which is a protein composed of multiple subunits.

Protein Domains

  • Proteins have repeating structural features called domains.
  • Domains create complexity in protein structures.
  • Domains of GPCRs (G Protein-Coupled Receptors) are repeating structural features, and transmembrane-spanning domains are an example of this.

Protein Versatility

  • Proteins demonstrate diverse structures (and hence functions).
  • Bradykinin is a peptide hormone involved in regulating blood pressure.

Definitions

  • Ligand: A molecule that forms a complex with a biomolecule.
  • Biomolecule: A molecule created by a living organism (e.g., proteins, carbohydrates, lipids, nucleic acids).
  • Agonist: A ligand that triggers a physiological response by binding to a receptor (external chemical signal).
  • Receptor: A biomolecule that initiates a physiological function when it forms a complex with an agonist; it receives an external chemical signal and mediates responses.
  • Antagonist: A ligand that inhibits agonist-mediated receptor activation.

Pharmacology

  • Pharmacology is the experimental study of chemical control of physiology.
  • It uses precise control of physiological functions through the precise application of exogenous chemicals.
  • An independent variable is something you control (chemical concentration).
  • A dependent variable is something you observe (physiological response).
  • The concentration-response function is a central concept in pharmacology.
  • Pharmacology seeks to define the lawful functional relationship between chemical concentration and a physiological response.
  • Pharmacodynamics: Focuses on ligand-receptor interactions (specifically, what the drug does to the body).
  • Pharmacokinetics: Focuses on what happens to the drug as it moves through the body (processes are ADME: Absorption, Distribution, Metabolism, Excretion).
  • Modern therapeutics, experimental therapeutics, and drug discovery are pharmacology-related applications, along with pharmacognosy.

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