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Questions and Answers
How do proteins differ from other macromolecules?
How do proteins differ from other macromolecules?
Proteins change their shape by binding to other macromolecules, small molecules, or atoms, or by altering their environment.
A small change in a protein's environment can lead to changes in its shape.
A small change in a protein's environment can lead to changes in its shape.
True (A)
What is a fully active confirmation of a protein?
What is a fully active confirmation of a protein?
The fully active confirmation of a protein is called the native confirmation. It is the conformation where the protein functions optimally.
Changes in protein structure cause changes in function, even if the change is small.
Changes in protein structure cause changes in function, even if the change is small.
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What are the levels of protein structure?
What are the levels of protein structure?
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What is the primary structure of a protein?
What is the primary structure of a protein?
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What determines the final shape of a protein?
What determines the final shape of a protein?
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What are the stages for building a protein?
What are the stages for building a protein?
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What type of bonds are involved in the primary structure?
What type of bonds are involved in the primary structure?
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What type of bonds are involved in the secondary structure?
What type of bonds are involved in the secondary structure?
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What type of bonds are involved in the tertiary structure (choose all that apply)?
What type of bonds are involved in the tertiary structure (choose all that apply)?
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What are the main terms that describe the combination of a subunit, a monomer, and a polypeptide chain?
What are the main terms that describe the combination of a subunit, a monomer, and a polypeptide chain?
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How do we know if a protein contains one or more polypeptide chains?
How do we know if a protein contains one or more polypeptide chains?
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What is the quaternary structure of a protein?
What is the quaternary structure of a protein?
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What is the function of hemoglobin?
What is the function of hemoglobin?
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Both myoglobin and hemoglobin function to transport oxygen.
Both myoglobin and hemoglobin function to transport oxygen.
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The primary structure of a protein determines its higher levels of structure.
The primary structure of a protein determines its higher levels of structure.
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There are many similarities between the primary structures of proteins that perform similar functions.
There are many similarities between the primary structures of proteins that perform similar functions.
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We can always predict the final structure of a protein based on its primary structure.
We can always predict the final structure of a protein based on its primary structure.
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What causes sickle-cell anemia?
What causes sickle-cell anemia?
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Why does the change from glutamic acid to valine in the Beta globin chain cause sickle-cell anemia?
Why does the change from glutamic acid to valine in the Beta globin chain cause sickle-cell anemia?
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Flashcards
Protein Conformational Flexibility
Protein Conformational Flexibility
A protein's ability to change shape by binding to other molecules or altering its environment.
Native Conformation
Native Conformation
A specific shape of a protein that is fully active and functional.
Primary Structure
Primary Structure
The linear sequence of amino acids in a protein, held together by peptide bonds.
Secondary Structure
Secondary Structure
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Tertiary Structure
Tertiary Structure
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Quaternary Structure
Quaternary Structure
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Multimeric Protein
Multimeric Protein
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Peptide Bond
Peptide Bond
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Ionic Interactions
Ionic Interactions
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Hydrophobic Interactions
Hydrophobic Interactions
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Van der Waals Interactions
Van der Waals Interactions
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Disulfide Bond
Disulfide Bond
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N-Terminal
N-Terminal
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C-Terminal
C-Terminal
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Protein Sequencing
Protein Sequencing
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Hemoglobin
Hemoglobin
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Myoglobin
Myoglobin
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Sickle-Cell Anemia
Sickle-Cell Anemia
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Conformational Change
Conformational Change
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Protein Flexibility
Protein Flexibility
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Quaternary Structure
Quaternary Structure
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Monomeric Protein
Monomeric Protein
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Amino Acid Sequence
Amino Acid Sequence
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Amino Acid Substitution
Amino Acid Substitution
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Protein Folding
Protein Folding
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Protein Science
Protein Science
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Proteome
Proteome
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Protein Separation
Protein Separation
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X-ray Crystallography
X-ray Crystallography
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Study Notes
Biochemistry - Proteins
- Proteins differ from other macromolecules due to their shape changing from binding to other molecules, small molecules or atoms, or environment changes.
- Each protein has many conformations, even minor changes affect its shape.
- Conformation changes directly affect protein function (fully or partly), activation or inhibition depend on changes.
- A native confirmation (100% active) is a crucial conformation.
- Protein structure level (primary, secondary, tertiary, and quaternary) directly affect the final protein shape.
- Primary structure is the base of protein structure, determining how the final shape develops.
Protein Structure Building Blocks
- Protein building involves amino acids, their types and sequences.
- Amino acids form a linear shape (primary structure).
- Nearby regions then wrap around, bonded through the protein backbone, forming secondary, tertiary and quaternary structure.
Protein Structure Levels
- Primary structure: Determined by the primary sequence of amino acids and peptide bonds.
- Secondary structure: Local regions of a polypeptide chain that fold regularly forming alpha helices or beta pleated sheets, stabilized by hydrogen bonds.
- Tertiary structure: The overall 3-D shape of a single polypeptide chain, stabilized by disulfide bonds, hydrophobic interactions, ionic interactions and van der Waals forces.
- Quaternary structure: Formed when multiple polypeptide chains (subunits) interact to form a larger functional protein. Held together by various bonds. Multimeric proteins.
Sickle Cell Anemia
- Sickle cell anemia results from a single amino acid substitution (glutamate to valine) in the 6th position of beta globin chain.
- The substitution (in primary structure) leads to hydrophobic interactions, causing hemoglobin molecules to aggregate, deforming red blood cells into sickle shapes.
- This alters oxygen transport contributing to blood clotting.
Protein Structure Prediction
- Protein's primary structure (sequence of amino acids) is often used to predict protein's 3D organization and function.
- The similarities in primary structures of proteins performing similar functions provide predictability. However, it is not always accurate.
- Differences in primary structures affect protein's shape and minor functional differences, such as Myoglobin and Hemoglobin, both involved in oxygen transport.
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Description
Explore the fascinating world of proteins in this biochemistry quiz. Understand how protein conformation and structure levels impact their function and activity. Dive into the building blocks of proteins and discover the significance of amino acids in shaping protein functionality.