Biochemistry Enzymes and Metabolism Quiz

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Questions and Answers

What is the primary role of an enzyme in a chemical reaction?

  • To decrease the rate of reaction
  • To consume the substrate
  • To form an enzyme-substrate complex permanently
  • To increase the rate of reaction (correct)

The enzyme carbonic anhydrase decreases the formation of H2CO3.

False (B)

What is the first step in the catalytic cycle of an enzyme?

substrate binds to the active site of the enzyme

The enzyme-substrate complex is ______-lived

<p>short</p> Signup and view all the answers

Match the enzyme action step with its description:

<p>Substrate binding = Substrate fits into the active site of the enzyme Enzyme shape change = Enzyme alters shape to fit tightly around the substrate Bond breaking = Chemical bonds of substrate break, forming a new complex</p> Signup and view all the answers

What is the term for a series of linked chemical reactions?

<p>Metabolic pathway (A)</p> Signup and view all the answers

Secondary metabolites are essential for the growth and development of an organism.

<p>False (B)</p> Signup and view all the answers

Name one example of a primary metabolite.

<p>Amino acids</p> Signup and view all the answers

In glycolysis, glucose is converted to _________ through a series of enzyme-catalyzed reactions.

<p>Pyruvic acid</p> Signup and view all the answers

Match the following types of amino acids with their examples:

<p>Acidic amino acids = Glutamic acid Basic amino acids = Lysine Neutral amino acids = Valine</p> Signup and view all the answers

What is the common structural feature of all alpha-amino acids?

<p>An amino group and an acidic group attached to the same carbon (A)</p> Signup and view all the answers

Metabolic reactions are generally uncatalyzed.

<p>False (B)</p> Signup and view all the answers

What is the main difference in production between primary and secondary metabolites during an organisms growth?

<p>Primary metabolites are produced continuously, while secondary metabolites do not have a continuous production.</p> Signup and view all the answers

What type of ions do amino acids form at their isoelectric point?

<p>Zwitterions (C)</p> Signup and view all the answers

Proteins are homopolymers composed of repeating units of a single type of amino acid.

<p>False (B)</p> Signup and view all the answers

What is the name of the bond that links amino acids together in a protein?

<p>peptide bond</p> Signup and view all the answers

A peptide bond is formed when a carboxyl group of one amino acid reacts with the _______ group of the next amino acid.

<p>amino</p> Signup and view all the answers

Match the following terms with their descriptions:

<p>Isoelectric point = pH at which amino acid exists as zwitterion Peptide bond = Bond linking amino acids in protein Heteropolymer = Polymer made of different monomer units Secondary Structure = Coiled helix structure of proteins.</p> Signup and view all the answers

What is released when two amino acids form a peptide bond?

<p>Water (D)</p> Signup and view all the answers

The secondary structure of a protein is a linear chain of amino acids.

<p>False (B)</p> Signup and view all the answers

What type of polymer are proteins based on the variety of amino acids present?

<p>heteropolymer</p> Signup and view all the answers

What is activation energy?

<p>The energy required for a reaction to proceed (A)</p> Signup and view all the answers

Enzymes increase the activation energy required for a reaction to occur.

<p>False (B)</p> Signup and view all the answers

What factors can affect enzyme activity?

<p>Temperature, pH, substrate concentration, and binding of specific chemicals</p> Signup and view all the answers

The __________ of 'S' to 'P' is made easier by enzymes.

<p>transition</p> Signup and view all the answers

How do enzymes help biological reactions?

<p>By lowering the activation energy (C)</p> Signup and view all the answers

Enzymes are unaffected by changes in substrate concentration.

<p>False (B)</p> Signup and view all the answers

What does the y-axis of the graph represent regarding enzyme activity?

<p>Potential energy content</p> Signup and view all the answers

Which of the following factors does NOT affect enzyme activity?

<p>Pressure (B)</p> Signup and view all the answers

Proteins are classified as homopolymers.

<p>False (B)</p> Signup and view all the answers

What is the maximum velocity in enzyme activity referred to as?

<p>Vmax</p> Signup and view all the answers

Enzyme activities are primarily determined by the concentration of the ______.

<p>substrate</p> Signup and view all the answers

Match the following enzyme classes with their functions:

<p>Lipases = Break down lipids Proteases = Break down proteins Amylases = Break down carbohydrates Nucleases = Break down nucleic acids</p> Signup and view all the answers

Which of the following statements correctly describes enzyme-substrate interaction?

<p>Enzymes can be reused after the reaction. (C)</p> Signup and view all the answers

The reaction will continue to increase indefinitely with an increase in substrate concentration after reaching Vmax.

<p>False (B)</p> Signup and view all the answers

Name one biomolecule that acts as a hormone.

<p>Insulin</p> Signup and view all the answers

What does the x-axis represent in the context of enzyme activity?

<p>Progression of structural transformation through transition state (C)</p> Signup and view all the answers

Exothermic reactions require an input of energy to form the product.

<p>False (B)</p> Signup and view all the answers

What is the term for the temperature and pH at which an enzyme shows its highest activity?

<p>Optimum temperature and optimum pH</p> Signup and view all the answers

Low temperature preserves the enzyme in a temporarily ______ state.

<p>inactive</p> Signup and view all the answers

What happens to enzymatic activity at temperatures above the optimum value?

<p>Activity declines due to denaturation (A)</p> Signup and view all the answers

Match the following terms related to enzymes with their definitions:

<p>Optimum temperature = The temperature at which an enzyme shows maximum activity Vmax = Maximum velocity of an enzymatic reaction Transition state = A higher energy state that reactants must achieve to form products Denaturation = Loss of enzymatic activity due to extreme conditions</p> Signup and view all the answers

The velocity of an enzymatic reaction continues to increase indefinitely with substrate concentration.

<p>False (B)</p> Signup and view all the answers

What is the effect of high temperature on enzymatic proteins?

<p>Denaturation</p> Signup and view all the answers

Flashcards

What are enzymes?

Enzymes are biological catalysts that speed up the rate of chemical reactions in living organisms.

How do enzymes affect reaction rates?

The rate of a catalyzed reaction is much faster than the rate of the same reaction without an enzyme.

What is the active site of an enzyme?

Every enzyme has a specific region called the active site where it binds to a molecule called the substrate.

What is the catalytic cycle of an enzyme?

The process of an enzyme working in a reaction. It involves substrate binding, product formation, and release.

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Give an example of an enzyme's incredible power.

The enzyme carbonic anhydrase accelerates the formation of carbonic acid (H2CO3) by a factor of 10 million.

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Isoelectric Point

The pH at which an amino acid exists as a zwitterion, with both a positive and negative charge.

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Zwitterion

A molecule with both a positive and negative charge, often found in amino acids at their isoelectric point.

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Polypeptide

A long chain of amino acids linked together by peptide bonds.

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Peptide Bond

A bond formed between the carboxyl group of one amino acid and the amino group of another amino acid, with the loss of a water molecule.

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Homopolymer

A polymer made up of only one type of monomer repeating many times.

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Heteropolymer

A polymer made up of different types of monomers, like proteins with various amino acids.

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Secondary Structure of Protein

The three-dimensional arrangement of a polypeptide chain, formed by hydrogen bonding and other interactions.

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Primary Structure of Protein

The specific order of amino acids in a polypeptide chain.

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What is a metabolic pathway?

A series of interconnected chemical reactions that occur within a living organism, where each step is catalyzed by a specific enzyme. These pathways are essential for life processes such as metabolism, growth, and development.

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Why are metabolic reactions catalyzed?

Metabolic reactions are chemical reactions that occur within living organisms and are catalyzed by enzymes, which are biological catalysts.

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Explain glycolysis.

Glycolysis is a metabolic pathway that breaks down glucose into pyruvic acid. This process involves ten different enzymatic reactions.

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What are primary metabolites?

These are essential molecules involved in normal growth, development, and reproduction in an organism. They are produced during the growth phase.

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What are secondary metabolites?

These metabolites are not directly involved in growth, development, or reproduction. They are produced after the growth phase and may have various roles, including defense mechanisms and pigmentation.

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What are amino acids?

Amino acids are the building blocks of proteins and are organic compounds containing both an amino group (-NH2) and a carboxyl group (-COOH) attached to the same carbon atom (α-carbon).

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How are amino acids classified?

Based on the number of amino and carboxyl groups, amino acids can be classified into acidic, basic, and neutral amino acids. This classification is based on the charge properties of their side chains.

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Give examples of acidic, basic, and neutral amino acids.

Examples of acidic amino acids include glutamic acid. Basic amino acids include lysine. Examples of neutral amino acids include valine.

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Optimum Temperature/pH

The point on the graph where the reaction rate is at its highest.

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Activation Energy

The energy required to start a chemical reaction.

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Substrate

The substance that an enzyme acts upon.

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Active Site

The region on an enzyme where the substrate binds.

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Denaturation

The process of an enzyme losing its shape and function due to heat.

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Exothermic Reaction

A reaction where energy is released, causing the surroundings to heat up.

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Endothermic Reaction

A reaction that requires energy input from the surroundings.

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Transition State

A temporary, high-energy state that the substrate must reach before becoming product.

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Substrate (S)

A molecule that binds to an enzyme and undergoes a chemical reaction catalyzed by the enzyme.

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Product (P)

The molecule resulting from the chemical reaction catalyzed by an enzyme.

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Activation Energy Difference

The difference in average energy content between the substrate and its transition state.

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How Enzymes Facilitate Reactions

Enzymes lower the activation energy required for a biological reaction to occur, speeding up the reaction rate.

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Factors Affecting Enzyme Activity

Enzymes are affected by changes in conditions such as temperature and pH. These changes can alter the enzyme's structure and function.

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Temperature and Enzyme Activity

An increase in temperature generally increases enzyme activity up to a certain point, beyond which it starts to decrease due to denaturation.

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pH and Enzyme Activity

Each enzyme has an optimal pH range where it functions best. Deviating from this range can affect its activity.

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Enzyme Activity and Substrate Concentration

The relationship between enzyme activity and substrate concentration. It depicts a hyperbolic curve, where the reaction rate increases as substrate concentration rises until it reaches a maximum (Vmax) and remains constant even with further substrate increase.

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Enzyme Classes

Enzymes are classified into six major categories based on the type of reaction they catalyze. These categories include oxidoreductases, transferases, hydrolases, lyases, isomerases, and ligases.

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Active Site of an Enzyme

The specific three-dimensional region of an enzyme where the substrate binds and the catalytic reaction occurs.

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Catalytic Cycle of an Enzyme

The process by which an enzyme binds to a substrate, converts it into a product, and releases the product.

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Study Notes

Biomolecules

  • Living organisms are made of different types of compounds.
  • Chemical analysis reveals they are composed of elements like carbon, hydrogen, oxygen, etc.
  • Living things and non-living things share the same elements, but the relative abundance of carbon and hydrogen is higher in living organisms.

How to Analyze Chemical Composition

  • Take a living tissue sample (e.g., liver) and grind it in trichloroacetic acid.
  • Strain the mixture through a cloth to separate two fractions.
  • The filtrate is the acid-soluble pool (micromolecules/biomolecules).
  • The retentate is the acid-insoluble fraction (biomacromolecules).

Acid-Soluble Pool

  • Thousands of organic compounds are found.
  • These compounds have molecular weights ranging from 18 to about 800 daltons.

Analysis of Inorganic Elements and Compounds

  • Biomolecules are carbon compounds in living tissues.
  • Living organisms also contain inorganic elements and compounds.
  • To analyze these, weigh a sample, dry it, and burn it completely.
  • The remaining ash contains inorganic elements (calcium, magnesium, etc.) and inorganic compounds (sulphate, phosphate).

Primary and Secondary Metabolites

  • Metabolites are organic compounds essential for cell activity.
  • Primary metabolites are crucial for growth, development, and reproduction and are continuously produced.
  • Secondary metabolites are often useful to humans but not essential for cell growth and are not continuously produced.

Amino Acids

  • Amino acids are the building blocks of proteins.
  • They are organic compounds with an amino group and a carboxyl group on the same carbon atom (alpha-amino acids).
  • There are four substituents (hydrogen, carboxyl group, amino group, variable R group).
  • Classification is based on the R group's nature.
  • Essential amino acids cannot be synthesised in the body and must be consumed in the diet.

Proteins

  • Proteins are polypeptides formed of linked amino acids via peptide bonds.
  • They are polymers
  • Proteins have four levels of structure: primary, secondary, tertiary, and quaternary.
  • Protein structure determines function.

Lipids

  • Lipids are water-insoluble molecules.
  • Types include fatty acids, glycerol, triglycerides, phospholipids, and steroids.
  • Fatty acids vary in length and saturation.
  • Triglycerides consist of glycerol esterified with fatty acids.
  • Phospholipids are key components of cell membranes.

Polysaccharides

  • Polysaccharides are long chains of sugars.
  • Examples include cellulose, starch, and glycogen.
  • Polysaccharides can be either homo or hetero polymers.
  • They are long chains of monosaccharides linked together via glycosidic bonds.

Nucleic Acids

  • Nucleic acids are polynucleotides.
  • Examples include DNA and RNA.
  • They store and transmit genetic information.
  • Nucleotides are composed of a sugar, a phosphate group, and a nitrogenous base.
  • Nitrogenous bases are classified as purines or pyrimidines.
  • DNA and RNA differ in their sugar component (deoxyribose vs ribose).

Enzymes

  • Enzymes are biological catalysts.
  • They speed up biochemical reactions by lowering the activation energy.
  • Enzymes are typically proteins. Some are RNA.
  • Enzymes have an active site where substrates bind.
  • Factors that affect enzymatic activity include temperature and pH.

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