Biochemistry Chapter on Sugars and Amino Acids

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Questions and Answers

Which of the following describes deoxysugars?

  • They are always monosaccharides.
  • They are sugars with additional hydroxyl groups.
  • They have one or more hydroxyl groups replaced by hydrogen atoms. (correct)
  • They are exclusively found in plant polysaccharides.

2-Deoxyribose is a deoxysugar component of RNA.

False (B)

What is the glycosidic bond formed from glucose and fructose called?

Sucrose

N-Linked oligosaccharides are attached to the nitrogen atom of the amino acid __________.

<p>asparagine</p> Signup and view all the answers

Match the following disaccharides with their components:

<p>Sucrose = Glucose + Fructose Lactose = Glucose + Galactose Maltose = Glucose + Glucose Fructose = Fructose + Glucose</p> Signup and view all the answers

Which deoxysugar is known for giving DNA greater stability compared to RNA?

<p>2-Deoxyribose (D)</p> Signup and view all the answers

Polysaccharides are formed from short chains of monosaccharides.

<p>False (B)</p> Signup and view all the answers

Define oligosaccharides and their primary function.

<p>Short chains of monosaccharides attached to proteins or lipids, functioning in cell recognition and signaling.</p> Signup and view all the answers

What role do metal ions play in metal ion catalysis?

<p>They activate water molecules. (D)</p> Signup and view all the answers

Nonessential amino acids can be synthesized by the body.

<p>True (A)</p> Signup and view all the answers

Name one example of a metal ion that stabilizes negative charges in catalytic processes.

<p>Zn²⁺ or Mg²⁺</p> Signup and view all the answers

Glutathione (GSH) is composed of _____, cysteine, and glycine.

<p>glutamate</p> Signup and view all the answers

Match the following amino acids to their source:

<p>Serine = Phosphoglycerate Cysteine = Phosphoglycerate Glycine = Phosphoglycerate Glutamate = Synthesis in the body</p> Signup and view all the answers

What is formed in the first step of glutathione synthesis?

<p>Gamma-glutamylcysteine (B)</p> Signup and view all the answers

A positive nitrogen balance occurs when the intake of nitrogen exceeds its loss.

<p>True (A)</p> Signup and view all the answers

What are two functions of glutathione?

<p>Involvement in DNA/RNA synthesis and protection from radiation.</p> Signup and view all the answers

Which glucose transporter is primarily involved in glucose uptake by liver cells?

<p>GLUT2 (C)</p> Signup and view all the answers

Muscle cells use GLUT2 for glucose uptake.

<p>False (B)</p> Signup and view all the answers

What is the first step in glycogenesis after glucose enters the cell?

<p>Glucose-6-Phosphate Formation</p> Signup and view all the answers

Glycogen synthesis is primarily carried out by the enzyme __________.

<p>glycogen synthase</p> Signup and view all the answers

What is the role of the branching enzyme in glycogen synthesis?

<p>Adds branches to the glycogen molecule (B)</p> Signup and view all the answers

Name one hormone that stimulates glycogenolysis in the liver.

<p>Glucagon</p> Signup and view all the answers

Match the steps of glycogenesis with their descriptions:

<p>Glucose-6-Phosphate Formation = Traps glucose inside the cell Isomerization to Glucose-1-Phosphate = Conversion of G6P to G1P Activation by UDP-Glucose = Forms UDP-glucose from G1P Glycogen Synthase Activity = Adds glucose units to glycogen chain</p> Signup and view all the answers

High concentrations of free glucose in the __________ influence glycogen synthesis.

<p>liver</p> Signup and view all the answers

What happens as a result of a deficiency in vitamin B12?

<p>Accumulation of methylmalonyl-CoA (C)</p> Signup and view all the answers

The liver can utilize ketone bodies for energy.

<p>False (B)</p> Signup and view all the answers

What is the primary source of NADPH for fatty acid synthesis?

<p>Pentose phosphate pathway</p> Signup and view all the answers

During prolonged fasting, excess acetyl-CoA is converted into __________.

<p>ketone bodies</p> Signup and view all the answers

Which molecule is produced at the end of the degradation of odd chain fatty acids?

<p>Propionyl-CoA (B)</p> Signup and view all the answers

Match the following components with their roles in fatty acid synthesis:

<p>Acetyl-CoA = Required for fatty acid synthesis NADPH = Provides reducing power Malonyl-CoA = Source of two carbon units Pentose phosphate pathway = Main source of NADPH</p> Signup and view all the answers

What transformation is required for Acetyl-CoA to enter the cytoplasm?

<p>Transformed into a transportable substance</p> Signup and view all the answers

Unsaturated fatty acids require the same enzymatic steps for degradation as saturated fatty acids.

<p>False (B)</p> Signup and view all the answers

What substance is formed when glycine is added to gamma-glutamylcysteine?

<p>Glutathione (GSH) (B)</p> Signup and view all the answers

Gamma-glutamyl transpeptidase is involved in the recycling of amino acids.

<p>True (A)</p> Signup and view all the answers

What does the enzyme gamma-glutamyl cyclotransferase release from the gamma-glutamyl-amino acid complex?

<p>Free amino acid</p> Signup and view all the answers

The process of converting ammonia into glutamine involves the reaction of glutamate and __________.

<p>ammonia</p> Signup and view all the answers

Match the following pairs of compounds with their respective enzymes:

<p>Alfa-ketoglutarate = ALT Oxaloacetate = AST Pyruvate = GPT Cysteinylglycine = Dipeptidase</p> Signup and view all the answers

Which of the following is NOT involved in the synthesis of glutathione?

<p>Ammonia (D)</p> Signup and view all the answers

Oxidative deamination results in the release of ammonia, which is non-toxic to the brain.

<p>False (B)</p> Signup and view all the answers

Name one role of free amino acids after being transported into the cell.

<p>Protein synthesis</p> Signup and view all the answers

What type of bond links the glucose units in amylose?

<p>α(1,4) glycosidic bond (C)</p> Signup and view all the answers

Glycogen is more highly branched than starch.

<p>True (A)</p> Signup and view all the answers

Name one function of polysaccharides.

<p>Energy reserve or structural material.</p> Signup and view all the answers

Lipids are hydrophobic or _______ organic compounds.

<p>amphipathic</p> Signup and view all the answers

Which of the following is a structural polysaccharide found in plant cell walls?

<p>Cellulose (C)</p> Signup and view all the answers

Match the following polysaccharides with their characteristics:

<p>Amylose = Unbranched chains of D-glucose Glycogen = Highly branched storage in animals Cellulose = Linear chains of glucose with β(1,4) bonds Chitin = Modified glucose in exoskeletons</p> Signup and view all the answers

Triglycerides store more energy per gram than carbohydrates.

<p>True (A)</p> Signup and view all the answers

What role do lipids play in cellular membranes?

<p>They form the lipid bilayer.</p> Signup and view all the answers

Flashcards

Polysaccharide

A large carbohydrate molecule made of many monosaccharide units linked together.

Linear Polysaccharides

Polysaccharides that have straight chains of sugar molecules.

Branched Polysaccharides

Polysaccharides that have branched chains of sugar molecules with multiple offshoots.

Starch

The storage form of glucose in plants, consisting of amylose (linear) and amylopectin (branched).

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Amylose

A linear, unbranched chain of glucose molecules linked by (1,4) glycosidic bonds. It is a component of starch.

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What are Deoxysugars?

Monosaccharides where one or more hydroxyl groups (-OH) have been replaced by hydrogen atoms (-H), making the sugar 'deoxygenated'.

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Amylopectin

A branched polymer of glucose molecules with both (1,4) and (1,6) glycosidic bonds. It is a component of starch.

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Glycogen

The storage form of glucose in animals, similar to amylopectin but more highly branched. It is abundant in liver and muscle cells.

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What is 2-Deoxyribose?

The primary deoxysugar found in DNA. It differs from ribose by having a hydrogen atom instead of a hydroxyl group at the C2 position.

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Cellulose

A structural polysaccharide found in plant cell walls. It consists of linear chains of glucose linked by β(1,4) glycosidic bonds, making it indigestible by humans.

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What is a Glycosidic Bond?

The covalent bond that links monosaccharide molecules together to form disaccharides and larger carbohydrates.

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What is Sucrose?

A disaccharide composed of glucose and fructose. It's commonly known as table sugar.

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What is Lactose?

A disaccharide composed of glucose and galactose. It's the sugar found in milk.

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What are Oligosaccharides?

Short chains of 3 to 10 monosaccharides linked together. They play roles in cell recognition, signaling, and structure.

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What are N-Linked Oligosaccharides?

Oligosaccharides linked to the nitrogen atom of the amino acid asparagine in proteins.

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What are O-Linked Oligosaccharides?

Oligosaccharides linked to the oxygen atom of the hydroxyl group of serine or threonine amino acids in proteins.

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Metal Ion Catalysis

Metal ions play an active role in the catalytic process. They might stabilize negative charges, activate water molecules, or act as electrophilic catalysts.

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Metal Ion: Substrate Orientation

Metal ions can help position the molecules reacting in the right way, like a guide ensuring they fit perfectly for the reaction to occur.

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Metal Ion: Charge Stabilization

Metal ions like Zn²⁺ or Mg²⁺ stabilize the negative charges of intermediate molecules during a chemical reaction.

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Glutathione Synthesis

Enzymatic reaction where glycine adds to gamma-glutamylcysteine, forming glutathione (GSH).

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Metal Ion: Water Activation

Metal ions can enhance the ability of water molecules to participate in reactions, making them more reactive.

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Carbonic Anhydrase: Water Activation

The enzyme carbonic anhydrase utilizes zinc (Zn²⁺) ion to activate water, turning carbon dioxide into bicarbonate.

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Gamma-Glutamyl Transpeptidase (GGT)

Enzyme located on the plasma membrane that transfers the gamma-glutamyl group from glutathione to an amino acid for transport into the cell.

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Nonessential Amino Acids

Amino acids that can be made by the body are called nonessential amino acids.

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Cysteinylglycine Hydrolysis

Break down of cysteinylglycine into cysteine and glycine, which recycle for glutathione production.

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Complete Proteins

Proteins containing sufficient amounts of all essential amino acids are considered complete proteins.

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Gamma-Glutamyl-Amino Acid Complex

Complex formed by GGT that allows amino acids to enter the cell.

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Plant Proteins: Incomplete

Plant proteins may lack one or more essential amino acids, so they are not complete proteins.

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Gamma-Glutamyl Cyclotransferase

Enzyme that breaks the bond in the gamma-glutamyl-amino acid complex, releasing the free amino acid and producing 5-oxoproline.

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5-Oxoprolinase Cycle

The pathway of converting 5-oxoproline back to glutamate.

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Transaminases

Enzymes that transfer an amino group from an amino acid to an alpha-keto acid.

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Oxidative Deamination

Process involving the removal of an amino group from an amino acid, generating ammonia as a byproduct.

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Glycogen Synthase

The primary enzyme responsible for adding UDP-glucose units to the growing glycogen chain, building the glycogen molecule.

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GLUT2 (Glucose Transporter 2)

This type of glucose transporter is found in liver cells and allows glucose to enter freely, depending on blood glucose levels.

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Glycogen Branching Enzyme

A branching enzyme introduces branches in the glycogen molecule, increasing its solubility and making it easier to mobilize glucose quickly.

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Phosphoglucomutase

This enzyme converts glucose-6-phosphate (G6P) into glucose-1-phosphate (G1P), a crucial step in glycogen synthesis.

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GLUT4 (Glucose Transporter 4)

This type of glucose transporter is found in muscle cells and is insulin-dependent, allowing glucose uptake after meals.

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Glycogenolysis

The process of breaking down glycogen into glucose, releasing it into the bloodstream.

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Beta-oxidation

A metabolic pathway that occurs in the mitochondria, breaking down fatty acids into acetyl-CoA. It involves a series of four enzymatic steps: oxidation, hydration, oxidation, and thiolysis.

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Acetyl-CoA

A molecule that enters the Krebs cycle and is produced from the breakdown of carbohydrates, fatty acids, and some amino acids.

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Ketogenesis

A metabolic process that occurs in the liver, converting excess acetyl-CoA into ketone bodies (acetoacetate, beta-hydroxybutyrate, and acetone) during periods of prolonged fasting or low carbohydrate intake.

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Ketone Bodies

Specialized molecules that are produced during ketogenesis and can be used as an energy source by certain organs, particularly the brain during fasting.

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Fatty Acid Synthesis

A metabolic pathway that occurs in the cytoplasm and requires energy for fatty acid synthesis. The process utilizes acetyl-CoA as the starting material and NADPH as the reducing power.

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NADPH

An important coenzyme required for the reduction reactions in fatty acid synthesis. It acts as a reducing agent, providing electrons for the conversion of molecules.

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Pentose Phosphate Pathway

A metabolic process that occurs in the pentose phosphate pathway and provides NADPH for fatty acid synthesis.

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Malic Enzyme

A metabolic process that converts malate into pyruvate, yielding NADPH for fatty acid synthesis.

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Study Notes

Metabolic Pathways

  • Pathways are sequential, leading from a starting molecule to a final product.
  • They can be reversible or irreversible.
  • Cells often require energy (ATP) to store substances within a metabolic pathway.

Energy Storage and Utilization

  • ATP is the primary energy currency of the cell.
  • Cells store energy in glycogen or triacylglycerols
  • During fasting, glucose is rapidly used and gluconeogenesis produces glucose from non-carbohydrate sources
  • Glucose uptake occurs through insulin-dependent or insulin-independent transporters.

Glycolysis

  • Converts glucose to lactate under anaerobic conditions, producing 2 ATP molecules.
  • Converts glucose to pyruvate under aerobic conditions, which can enter the Krebs cycle via acetyl-CoA.
  • Mature red blood cells rely solely on glycolysis.

Glycogen Breakdown

  • This process occurs in the liver and skeletal muscles and is different in each tissue because of the presence/absence of glucose-6-phosphatase.

Glycogen Synthesis

  • Glucose is initially phosphorylated to glucose-6-phosphate (G6P) trapping it inside the cell.
  • G6P is then converted into glucose-1-phosphate (G1P) by phosphoglucomutase.
  • G1P is activated by binding with uridine diphosphate (UDP), forming UDP-glucose.
  • UDP-glucose is added to the growing glycogen chain by glycogen synthase.
  • Branching enzyme introduces branches to increase solubility and mobility of the glucose.

Pentose Phosphate Pathway

  • The objective is to produce NADPH.
  • NADPH is crucial for reducing agents in biosynthetic reactions.

Gluconeogenesis

  • Synthesizes glucose from non-carbohydrate precursors (lactate, amino acids, glycerol) when carbohydrate sources are insufficient.
  • The pathway utilizes some but not all of the steps of glycolysis, bypassing the irreversible steps with unique gluconeogenic enzymes.
  • Key enzymes include Pyruvate Carboxylase and PEPCK.
  • Influenced by hormones like glucagon (stimulates gluconeogenesis) and insulin (inhibits gluconeogenesis).

Cori Cycle

  • Involves the conversion of lactate produced in muscles during anaerobic conditions to glucose in the liver and back to lactate in the muscle.

Glucose-Alanine Cycle

  • A pathway that transfers nitrogen (amino groups) from the muscles to the liver.

Lipid Metabolism

  • Fatty acids are broken down into acetyl-CoA.
  • This acetyl-CoA enters the Krebs cycle to produce energy.
  • Synthesis involves combining acetyl-CoA and malonyl-CoA to build fatty acids.
  • Transport into the mitochondria is essential, using carriers and the carnitine shuttle.
  • Cholesterol and bile acid synthesis, use intermediates, and are critically important for cell membranes and other functions.

Beta-Oxidation

  • Fatty acids are broken down into acetyl-CoA.
  • NADH and FADH2 are produced, which enter the electron transport chain.
  • ATP is produced during oxidative phosphorylation.

Oxidative Phosphorylation

  • Electrons from NADH and FADH2 are passed along the electron transport chain.
  • This generates a proton gradient, which powers ATP synthesis
  • This reaction requires oxygen (O2).

Amino Acid Metabolism

  • Initial step involved removal of the amino group.
  • Byproducts are used to synthesize fatty acids, glucose, and to generate energy.

Urea Cycle

  • Converts ammonia into urea for excretion.
  • Important for nitrogen homeostasis.
  • Involves several enzymes and intermediates.

Cholesterol Synthesis

  • Acetyl-CoA is the starting material.
  • The mevalonate pathway is a key step in the synthesis.
  • Cholesterol is essential for membrane structure and steroid hormone synthesis.

Regulation of Cellular Processes

  • Citrate and malonyl-CoA are allosteric effectors.
  • Glucagon and insulin affect a number of processes, including synthesis and breakdown of fatty acids, carbohydrates, and protein
  • Von Gierke's Disease (G6Pase deficiency)
  • Pompe's Disease (a-1,4-glucosidase deficiency)
  • Cori's Disease (debranching enzyme deficiency)
  • McArdle's Disease (muscle glycogen phosphorylase deficiency)
  • Lactic Acidosis (impaired metabolism due to low oxygen)
  • Pyruvate Kinase Deficiency (impaired ATP production)
  • Glucose 6-Phosphate Dehydrogenase deficiency

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